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The map label for this gene is ykoT [H]

Identifier: 220905435

GI number: 220905435

Start: 2619166

End: 2620122

Strand: Reverse

Name: ykoT [H]

Synonym: Ddes_2173

Alternate gene names: 220905435

Gene position: 2620122-2619166 (Counterclockwise)

Preceding gene: 220905436

Following gene: 220905434

Centisome position: 91.18

GC content: 57.68

Gene sequence:

>957_bases
TTGTCGTCCCGTCCTGTTCCTTTGCTCGCGCTGGTGGTTCCTTGCTATAACGAGGAAGAAACCTTGCCGGATACTCTGGC
TGCCCTGGCGGCACTGCTTGAAAAGCTCAAGGCCGCCGGGCGCATCCGAAGCGACAGCTATGCACTGTATGTGGATGACG
TCAGCCGGGATACCACCTGGGAACTGCTCGAGGCGCGGTATGCTGTGGATCCTTTTTGCCGTGCCGTCAGTTTTGCGGCC
AATGGCGGGCATCAGAACGCCCTGTGGGCGGGTATGGATATGGCCCGGCAATGGGGGGTAGACTGCATAATCAGTCTGGA
TGCCGACCTGCAGGACAATATATCTGTTGTGCCGGAAATGCTGGACCTCTATGCCCGGGGTTGTGACATTGTATACGGCG
TGCGCAATGACCGCCGCACGGACACAGCTTTCAAGCGCCGGACGGCAGCCATGTTTTACGGGATGATGCGCTGGCTGAAG
GTTCCCCTGGTTCCCCATCACGCGGGCTACCGCCTGGTGGCCCGCGCTGTGCTCGACGTACTGCCGGGCATCAAGGAGCA
GAAGCTTTTTCTGCGCGGCCTTTTCCCCTCCATGGGCTTCCGCAGCGACTCGGTCTATTACGCGCGGCTCTCACGTCGGG
CCGGGGAGACCAAGTATTCTTTCTGGAAGATGCTCTCCTTCGCCTGGCAGGGTATTACCTCATGCAGTGCGGCCCCCTTG
CGGCTGGCCGGGATCATGAGTTTTCTGTGCATGCTGGCTGCCGTAGGGTACAGCCTTGTTTCCCTGTACAAGTACATGGC
CGGAGAGACCATACAGGGCTGGACATCCATGATTATCGTTGTGCTCATGCTTGGTTCTGTGCAGTTGTTCTGCCTGGCCG
TCATGGGTGAGTATCTTGCCAAGATTTTTACCGAGGTTCGCAGAAAACCACGCTATATTGTGGAAAAAGTGTTGTGA

Upstream 100 bases:

>100_bases
GGCCTGACCACTGAAGATGTGGACGCCATATGCGAGGGCGTGGCCCAGGCGCTTGCGCGTTGAGCGGGCTGAAGCCCGCA
CTGTCCTGAAGGAGGCTGTC

Downstream 100 bases:

>100_bases
GCAAAGGCTTGCGCCCGCCTGTTCCGGCGGATCTTGCCGCCTTTGTACGGGCATTGCTGGCCCGCCGCTGGGTGCGTTTC
GGCATGGTGGGCGGCGCCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSSRPVPLLALVVPCYNEEETLPDTLAALAALLEKLKAAGRIRSDSYALYVDDVSRDTTWELLEARYAVDPFCRAVSFAA
NGGHQNALWAGMDMARQWGVDCIISLDADLQDNISVVPEMLDLYARGCDIVYGVRNDRRTDTAFKRRTAAMFYGMMRWLK
VPLVPHHAGYRLVARAVLDVLPGIKEQKLFLRGLFPSMGFRSDSVYYARLSRRAGETKYSFWKMLSFAWQGITSCSAAPL
RLAGIMSFLCMLAAVGYSLVSLYKYMAGETIQGWTSMIIVVLMLGSVQLFCLAVMGEYLAKIFTEVRRKPRYIVEKVL

Sequences:

>Translated_318_residues
MSSRPVPLLALVVPCYNEEETLPDTLAALAALLEKLKAAGRIRSDSYALYVDDVSRDTTWELLEARYAVDPFCRAVSFAA
NGGHQNALWAGMDMARQWGVDCIISLDADLQDNISVVPEMLDLYARGCDIVYGVRNDRRTDTAFKRRTAAMFYGMMRWLK
VPLVPHHAGYRLVARAVLDVLPGIKEQKLFLRGLFPSMGFRSDSVYYARLSRRAGETKYSFWKMLSFAWQGITSCSAAPL
RLAGIMSFLCMLAAVGYSLVSLYKYMAGETIQGWTSMIIVVLMLGSVQLFCLAVMGEYLAKIFTEVRRKPRYIVEKVL
>Mature_317_residues
SSRPVPLLALVVPCYNEEETLPDTLAALAALLEKLKAAGRIRSDSYALYVDDVSRDTTWELLEARYAVDPFCRAVSFAAN
GGHQNALWAGMDMARQWGVDCIISLDADLQDNISVVPEMLDLYARGCDIVYGVRNDRRTDTAFKRRTAAMFYGMMRWLKV
PLVPHHAGYRLVARAVLDVLPGIKEQKLFLRGLFPSMGFRSDSVYYARLSRRAGETKYSFWKMLSFAWQGITSCSAAPLR
LAGIMSFLCMLAAVGYSLVSLYKYMAGETIQGWTSMIIVVLMLGSVQLFCLAVMGEYLAKIFTEVRRKPRYIVEKVL

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=311, Percent_Identity=33.4405144694534, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1788588, Length=322, Percent_Identity=26.0869565217391, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35742; Mature: 35611

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRPVPLLALVVPCYNEEETLPDTLAALAALLEKLKAAGRIRSDSYALYVDDVSRDTTW
CCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
ELLEARYAVDPFCRAVSFAANGGHQNALWAGMDMARQWGVDCIISLDADLQDNISVVPEM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
LDLYARGCDIVYGVRNDRRTDTAFKRRTAAMFYGMMRWLKVPLVPHHAGYRLVARAVLDV
HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LPGIKEQKLFLRGLFPSMGFRSDSVYYARLSRRAGETKYSFWKMLSFAWQGITSCSAAPL
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH
RLAGIMSFLCMLAAVGYSLVSLYKYMAGETIQGWTSMIIVVLMLGSVQLFCLAVMGEYLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFTEVRRKPRYIVEKVL
HHHHHHHHCHHHHHHHCC
>Mature Secondary Structure 
SSRPVPLLALVVPCYNEEETLPDTLAALAALLEKLKAAGRIRSDSYALYVDDVSRDTTW
CCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
ELLEARYAVDPFCRAVSFAANGGHQNALWAGMDMARQWGVDCIISLDADLQDNISVVPEM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
LDLYARGCDIVYGVRNDRRTDTAFKRRTAAMFYGMMRWLKVPLVPHHAGYRLVARAVLDV
HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LPGIKEQKLFLRGLFPSMGFRSDSVYYARLSRRAGETKYSFWKMLSFAWQGITSCSAAPL
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH
RLAGIMSFLCMLAAVGYSLVSLYKYMAGETIQGWTSMIIVVLMLGSVQLFCLAVMGEYLA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIFTEVRRKPRYIVEKVL
HHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]