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The map label for this gene is yhaM [C]

Identifier: 220905417

GI number: 220905417

Start: 2599518

End: 2600798

Strand: Reverse

Name: yhaM [C]

Synonym: Ddes_2155

Alternate gene names: 220905417

Gene position: 2600798-2599518 (Counterclockwise)

Preceding gene: 220905418

Following gene: 220905412

Centisome position: 90.51

GC content: 60.81

Gene sequence:

>1281_bases
ATGAATCAGAACTGGCAGTCATTTATAGATTTGTTGCATGAAGAAGTAGTACCCGCGCTCGGCTGCACAGAGCCTGTGGC
AGTGGCCCTTACCGCCGCACAGGCGGCGGAAACGCTGGGCCTTACGCCGGAAAGGCTTGAAGTCGAGGTCAGCGCCAATC
TGCTCAAGAACGGCATGGGCGTCATGGTTCCCGGTACGGGAAGCATGGGACTGAGCATTGCCGCGGCTGCCGGCGCGCTT
GGCGGCCGCAGCAGTCTGGGGCTTGAATGCCTGCGCCATATGGATGAGGCCCAGGTGGCGGCAGCCAAGGCCCTTGTGGA
GGCCGGATGCGTGGAAATGAAGCTGGCGGACAATGACCTGCTGCTTTACTGCGCCGTGACGGCCCATGCGCAGGGGCACA
GCGCCAGGGCCGAGCTTGTGGATAGCCATGCCAACATCACGCGGGTATGGCACGACGGCAAGCTTGTGTTCGCCAAGAAA
GAGCAGGCGGAGAGCCAGGACGACCAGGCCCGCCCCTGGCCCCTGACCCTGGCGGGCATTTATGACTTTGCCGTGGGCGC
TCCCATTGAGGATATATCGTTTATCCTCGAAGCGGCGCGTATGAACCGCACAGTGGCCGAGGAAGGGCTGAAAAGCCAAT
ACGGCCTTGCTGTGGGCAAAAGTATGGATACGCAGATCCGCCAGCGTATTCTCGCGGACGACATGGCCTCTTTTGCCGTC
AAGCTCACTGCGGCCGCAGCCGATGCGCGCATGGCGGGCATCATGATGCCTGTCATGAGCAATTCCGGCAGCGGCAATCA
GGGCATTACCTGCACGATGCCGGTGGTGGCTTGCGCCATCCGCCTGCAGATACGCGACGAAGCCCTTGCCCGCGCGCTTA
TCATGAGCCACCTTACGTCCATTCACGTCAAGCATCATCTGGGGCGGCTGTCCGCGCATTGCGGGGCCATGGTGGCCGGC
ACGGCTTCGGGGTGCGGTATAGCCATGCTGCTCGGCGGCGGCCTTAAAGAAATGGAAATGACCGTGCGCAACATGGTGGG
CAATATGGCCGGCATGATTTGTGATGGCGCAAAAAGCTCCTGTGCGCTCAAGGTAGCCTCGGCCGTGGGTGCGGGCATAC
AGGCCGCCATGCTGGCCATGAGCGGGTCCGCAGTGCCGGGCAATGAAGGTATTGTGGATGATGACATTGAAGTCTGCATT
GCCAATCTGGGACGTCTGGGGTCCACCGGCATGCGCGAGACCGACAAGGTTATTCTGGATATTATGCTGCACAAAAGCTG
A

Upstream 100 bases:

>100_bases
ACGTCACCGGCGACGGGGCGCTGGCCCTTATTCTTGAAGGTGTTTTCAACGACAACGGGCAACTGGGAGCGTTGCAGGCA
CCGTCAATGACGGAGCATTC

Downstream 100 bases:

>100_bases
GGGCTTTTTTACAGATGATCCTGTCCAAAACAGGAAAAAGGACCTTTGACGCGATCAGACGGGTAAAAGCATTGCGGCAT
GCATGTGCCGGTGTGCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNQNWQSFIDLLHEEVVPALGCTEPVAVALTAAQAAETLGLTPERLEVEVSANLLKNGMGVMVPGTGSMGLSIAAAAGAL
GGRSSLGLECLRHMDEAQVAAAKALVEAGCVEMKLADNDLLLYCAVTAHAQGHSARAELVDSHANITRVWHDGKLVFAKK
EQAESQDDQARPWPLTLAGIYDFAVGAPIEDISFILEAARMNRTVAEEGLKSQYGLAVGKSMDTQIRQRILADDMASFAV
KLTAAAADARMAGIMMPVMSNSGSGNQGITCTMPVVACAIRLQIRDEALARALIMSHLTSIHVKHHLGRLSAHCGAMVAG
TASGCGIAMLLGGGLKEMEMTVRNMVGNMAGMICDGAKSSCALKVASAVGAGIQAAMLAMSGSAVPGNEGIVDDDIEVCI
ANLGRLGSTGMRETDKVILDIMLHKS

Sequences:

>Translated_426_residues
MNQNWQSFIDLLHEEVVPALGCTEPVAVALTAAQAAETLGLTPERLEVEVSANLLKNGMGVMVPGTGSMGLSIAAAAGAL
GGRSSLGLECLRHMDEAQVAAAKALVEAGCVEMKLADNDLLLYCAVTAHAQGHSARAELVDSHANITRVWHDGKLVFAKK
EQAESQDDQARPWPLTLAGIYDFAVGAPIEDISFILEAARMNRTVAEEGLKSQYGLAVGKSMDTQIRQRILADDMASFAV
KLTAAAADARMAGIMMPVMSNSGSGNQGITCTMPVVACAIRLQIRDEALARALIMSHLTSIHVKHHLGRLSAHCGAMVAG
TASGCGIAMLLGGGLKEMEMTVRNMVGNMAGMICDGAKSSCALKVASAVGAGIQAAMLAMSGSAVPGNEGIVDDDIEVCI
ANLGRLGSTGMRETDKVILDIMLHKS
>Mature_426_residues
MNQNWQSFIDLLHEEVVPALGCTEPVAVALTAAQAAETLGLTPERLEVEVSANLLKNGMGVMVPGTGSMGLSIAAAAGAL
GGRSSLGLECLRHMDEAQVAAAKALVEAGCVEMKLADNDLLLYCAVTAHAQGHSARAELVDSHANITRVWHDGKLVFAKK
EQAESQDDQARPWPLTLAGIYDFAVGAPIEDISFILEAARMNRTVAEEGLKSQYGLAVGKSMDTQIRQRILADDMASFAV
KLTAAAADARMAGIMMPVMSNSGSGNQGITCTMPVVACAIRLQIRDEALARALIMSHLTSIHVKHHLGRLSAHCGAMVAG
TASGCGIAMLLGGGLKEMEMTVRNMVGNMAGMICDGAKSSCALKVASAVGAGIQAAMLAMSGSAVPGNEGIVDDDIEVCI
ANLGRLGSTGMRETDKVILDIMLHKS

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=432, Percent_Identity=44.4444444444444, Blast_Score=314, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 44391; Mature: 44391

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNWQSFIDLLHEEVVPALGCTEPVAVALTAAQAAETLGLTPERLEVEVSANLLKNGMG
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCCE
VMVPGTGSMGLSIAAAAGALGGRSSLGLECLRHMDEAQVAAAKALVEAGCVEMKLADNDL
EEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCCCE
LLYCAVTAHAQGHSARAELVDSHANITRVWHDGKLVFAKKEQAESQDDQARPWPLTLAGI
EEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCEEEEEECHHCCCCCCCCCCCCEEEHHH
YDFAVGAPIEDISFILEAARMNRTVAEEGLKSQYGLAVGKSMDTQIRQRILADDMASFAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
KLTAAAADARMAGIMMPVMSNSGSGNQGITCTMPVVACAIRLQIRDEALARALIMSHLTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHVKHHLGRLSAHCGAMVAGTASGCGIAMLLGGGLKEMEMTVRNMVGNMAGMICDGAKSS
HHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCH
CALKVASAVGAGIQAAMLAMSGSAVPGNEGIVDDDIEVCIANLGRLGSTGMRETDKVILD
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
IMLHKS
HHCCCC
>Mature Secondary Structure
MNQNWQSFIDLLHEEVVPALGCTEPVAVALTAAQAAETLGLTPERLEVEVSANLLKNGMG
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCCE
VMVPGTGSMGLSIAAAAGALGGRSSLGLECLRHMDEAQVAAAKALVEAGCVEMKLADNDL
EEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCCCE
LLYCAVTAHAQGHSARAELVDSHANITRVWHDGKLVFAKKEQAESQDDQARPWPLTLAGI
EEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCEEEEEECHHCCCCCCCCCCCCEEEHHH
YDFAVGAPIEDISFILEAARMNRTVAEEGLKSQYGLAVGKSMDTQIRQRILADDMASFAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
KLTAAAADARMAGIMMPVMSNSGSGNQGITCTMPVVACAIRLQIRDEALARALIMSHLTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHVKHHLGRLSAHCGAMVAGTASGCGIAMLLGGGLKEMEMTVRNMVGNMAGMICDGAKSS
HHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCH
CALKVASAVGAGIQAAMLAMSGSAVPGNEGIVDDDIEVCIANLGRLGSTGMRETDKVILD
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
IMLHKS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA