Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is hyuA [H]
Identifier: 220905404
GI number: 220905404
Start: 2581571
End: 2583652
Strand: Reverse
Name: hyuA [H]
Synonym: Ddes_2142
Alternate gene names: 220905404
Gene position: 2583652-2581571 (Counterclockwise)
Preceding gene: 220905412
Following gene: 220905403
Centisome position: 89.92
GC content: 66.67
Gene sequence:
>2082_bases ATGAAATACACAGACATGAAAAATACGGCAGATACTTCCGTATATTTGCTGGGAATCGATGCCGGAGGAACCCATACCGA TGCGGTTTTGCTGATGGAGGACCCCGGGGGGCATCCGTCCGGCAGGGCGGACGCGTCGCCCGAAGGGCATGCCGCAGCTG CCCTGAACGCCGCTGACGACACACATGTGGCATACGCGCCCCATGTATCGGAACAGCCGGAAAAACAGGCTGTTCCGGGC GCGGCGTTGCCCCGTATGCGTATTCTGGCCGCTGCCAAAACGCCCACGCGGCATGATGATATGCCCGCGTCCATTGGCGA GGTGCTGGCGGCCCTGACAACCGCGCTGGACAGTGACCCGATCCTGGCCACCTCTGGCGGCGCGGCGCTGCTCGGGCGGG TGAGCCGGGTCACCCTTGGGGCTACGCTGGCTGTCAACGCCCTTGTGCAGGGCAAGGCTGATGCCGTGGGACTGGCCTTG TCTGCCGGGCCGGGGCTTGCTCCCGGCCGTTTTGCCCTGGGGCGGCATGTATGTGTAGTTCCCGGCGGTCTTGATCACAG GGGGGTTGAAGTCAGCCCGCTGGATGTTGCGGGCCTGGAGCGTCAGGCTGCCCTGTGGAAAGAGGAAGGCATCACCGCCG TGGCTTGCGTGAGCAAGTTTTCGCCGCGTAATCCGGCGCACGAGCAGGCCATGGCCCGGGCTGTGGCGCGCGCGTACGGC CCTTCCTTGCGCCGGGATGCACCCTCGGACCGCGTACCGGAGGCAGAACCAGCCGTGCCGGGCATTACTGAGGGGCACAG GCTTTCCGGCCGTCTCAGCTTTCCGCGGCGTATCGCCACCGCCTATTTCAACGCTGCCGTGCAGCGCCTGCACGTCAGTT TTCTGGAGGCCGCGGAGAGCGCCCTTGCCCGGGCCGGAGTATCCGCCGCGGTGCGCCTGCTCAAGGCTGACGGCGGGGCC GTGCCGCTGAGCCTTTCACGGCAGGAGCCGGTGCAGTCCATCCTTTCCGGCCCGGCAGCCAGCGTTATGGGCGTGCTGGC TTTGTGTCCGGCCGCGTGCCAGGGCTGCGGGCTGCTGCTGGATATGGGCGGCACCACCACAGACATGGCCCTTGTGGCGG ACGGCTCCCCGGTGGTGGACAGGGACGGCATGGTCCTTCAGGGACGGCGTACGCTGGTGCGCGCGCTGGCTTCGGTTTCC ATCGGCGTGGGTGGTGATTCGCTTGTCAGCGTCGAGGGCAGCGGCCATGAGGCCGTAGTGCGCGTGGGACCGCTGCGGCA GGGACCTGCCGTGGCCTTTGGCGGCAGCCTGCCAACCCTGCTGGATGCCCTCAACACACTGCACAGCCAACCCTGTTCCG GGTTGGAAAATTTAACGGAAAACCCGGCGGCCAACGCGGCAGAAAATCCGGCAGCAAGCGGCGCTGCGGCACAGGCCACC GCACAACTTGCAAAAACAGCAGGGGATGTGGCTGCTTCGGTGGAGAGCATGGGGCATCTGGCTCGGCGGCACGGCCTTGC ACCCCAGGTTCTGGCCCGCAAGGCTGTGGACGACGCCCTCGCCCGGATAGTTGCAGCTGCCCATGAACTGGTAGAGGACA TCAACGCCCGTCCCATTTATACCCTTGCGGGGCTGAAGGCGCTGCGTCAGGCGCGGCCCCTGCACGCCTGGCTCATGGGC GGCCCGGCAGACTGCATGAGAACGCACCTGGCCGCTGCGCTGGGCCTGCCCGTAAAATGCCCGCCCCACGCCGCGGTGGC CAATGCCGTGGGCGCGGCCCTGACCCTGCCCACGGATTCGCTGGAAGTTTACGCAGATACCGGCCGCGGCATTCTGCGCG TTCCGGCTCTGGACCTGACGGAAAATATCCACCGGGGCTACAGTCTGGACGCCCTTGGTGAACGCGCCCGTGATCTGCTG CTGGAAAAGCTCGAACGGGGCGGAGCGCACGGGGCCGCAGTGGAGATCACCGGAGCAGAATCGTTCGCCACGCTGGACGA CAGCGGCCGCAGCAGCCGGGACATGCGCGTGGTCTGTCAGGCTGTGCCGGGACTGGCTGGCCGGGTGGTCCAGAGCCATT AA
Upstream 100 bases:
>100_bases GCGGGCCTTGAGCGGCGCGCGCCGCCTCCGGGCAAAGGTCTGGCCCTGGGGCGGCGCATGCCGTATGCTGGGCCTGCCTT TTTGCGCAATGAGGACAGAT
Downstream 100 bases:
>100_bases TGTCTGAAATGCGCTCATGCTCTCTGTTTGGTGCGCCAGTGGGTGGCAGCGGCGAACCTGCTTGCCACCTGGCTGACCCC TGCCCGCCTTGTCATTGCGG
Product: Hydantoinase/oxoprolinase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MKYTDMKNTADTSVYLLGIDAGGTHTDAVLLMEDPGGHPSGRADASPEGHAAAALNAADDTHVAYAPHVSEQPEKQAVPG AALPRMRILAAAKTPTRHDDMPASIGEVLAALTTALDSDPILATSGGAALLGRVSRVTLGATLAVNALVQGKADAVGLAL SAGPGLAPGRFALGRHVCVVPGGLDHRGVEVSPLDVAGLERQAALWKEEGITAVACVSKFSPRNPAHEQAMARAVARAYG PSLRRDAPSDRVPEAEPAVPGITEGHRLSGRLSFPRRIATAYFNAAVQRLHVSFLEAAESALARAGVSAAVRLLKADGGA VPLSLSRQEPVQSILSGPAASVMGVLALCPAACQGCGLLLDMGGTTTDMALVADGSPVVDRDGMVLQGRRTLVRALASVS IGVGGDSLVSVEGSGHEAVVRVGPLRQGPAVAFGGSLPTLLDALNTLHSQPCSGLENLTENPAANAAENPAASGAAAQAT AQLAKTAGDVAASVESMGHLARRHGLAPQVLARKAVDDALARIVAAAHELVEDINARPIYTLAGLKALRQARPLHAWLMG GPADCMRTHLAAALGLPVKCPPHAAVANAVGAALTLPTDSLEVYADTGRGILRVPALDLTENIHRGYSLDALGERARDLL LEKLERGGAHGAAVEITGAESFATLDDSGRSSRDMRVVCQAVPGLAGRVVQSH
Sequences:
>Translated_693_residues MKYTDMKNTADTSVYLLGIDAGGTHTDAVLLMEDPGGHPSGRADASPEGHAAAALNAADDTHVAYAPHVSEQPEKQAVPG AALPRMRILAAAKTPTRHDDMPASIGEVLAALTTALDSDPILATSGGAALLGRVSRVTLGATLAVNALVQGKADAVGLAL SAGPGLAPGRFALGRHVCVVPGGLDHRGVEVSPLDVAGLERQAALWKEEGITAVACVSKFSPRNPAHEQAMARAVARAYG PSLRRDAPSDRVPEAEPAVPGITEGHRLSGRLSFPRRIATAYFNAAVQRLHVSFLEAAESALARAGVSAAVRLLKADGGA VPLSLSRQEPVQSILSGPAASVMGVLALCPAACQGCGLLLDMGGTTTDMALVADGSPVVDRDGMVLQGRRTLVRALASVS IGVGGDSLVSVEGSGHEAVVRVGPLRQGPAVAFGGSLPTLLDALNTLHSQPCSGLENLTENPAANAAENPAASGAAAQAT AQLAKTAGDVAASVESMGHLARRHGLAPQVLARKAVDDALARIVAAAHELVEDINARPIYTLAGLKALRQARPLHAWLMG GPADCMRTHLAAALGLPVKCPPHAAVANAVGAALTLPTDSLEVYADTGRGILRVPALDLTENIHRGYSLDALGERARDLL LEKLERGGAHGAAVEITGAESFATLDDSGRSSRDMRVVCQAVPGLAGRVVQSH >Mature_693_residues MKYTDMKNTADTSVYLLGIDAGGTHTDAVLLMEDPGGHPSGRADASPEGHAAAALNAADDTHVAYAPHVSEQPEKQAVPG AALPRMRILAAAKTPTRHDDMPASIGEVLAALTTALDSDPILATSGGAALLGRVSRVTLGATLAVNALVQGKADAVGLAL SAGPGLAPGRFALGRHVCVVPGGLDHRGVEVSPLDVAGLERQAALWKEEGITAVACVSKFSPRNPAHEQAMARAVARAYG PSLRRDAPSDRVPEAEPAVPGITEGHRLSGRLSFPRRIATAYFNAAVQRLHVSFLEAAESALARAGVSAAVRLLKADGGA VPLSLSRQEPVQSILSGPAASVMGVLALCPAACQGCGLLLDMGGTTTDMALVADGSPVVDRDGMVLQGRRTLVRALASVS IGVGGDSLVSVEGSGHEAVVRVGPLRQGPAVAFGGSLPTLLDALNTLHSQPCSGLENLTENPAANAAENPAASGAAAQAT AQLAKTAGDVAASVESMGHLARRHGLAPQVLARKAVDDALARIVAAAHELVEDINARPIYTLAGLKALRQARPLHAWLMG GPADCMRTHLAAALGLPVKCPPHAAVANAVGAALTLPTDSLEVYADTGRGILRVPALDLTENIHRGYSLDALGERARDLL LEKLERGGAHGAAVEITGAESFATLDDSGRSSRDMRVVCQAVPGLAGRVVQSH
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 70784; Mature: 70784
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTDMKNTADTSVYLLGIDAGGTHTDAVLLMEDPGGHPSGRADASPEGHAAAALNAADD CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC THVAYAPHVSEQPEKQAVPGAALPRMRILAAAKTPTRHDDMPASIGEVLAALTTALDSDP CEEEECCCCCCCCHHHCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC ILATSGGAALLGRVSRVTLGATLAVNALVQGKADAVGLALSAGPGLAPGRFALGRHVCVV EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCEEEEE PGGLDHRGVEVSPLDVAGLERQAALWKEEGITAVACVSKFSPRNPAHEQAMARAVARAYG CCCCCCCCEEECCCCHHCCHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHC PSLRRDAPSDRVPEAEPAVPGITEGHRLSGRLSFPRRIATAYFNAAVQRLHVSFLEAAES CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALARAGVSAAVRLLKADGGAVPLSLSRQEPVQSILSGPAASVMGVLALCPAACQGCGLLL HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEE DMGGTTTDMALVADGSPVVDRDGMVLQGRRTLVRALASVSIGVGGDSLVSVEGSGHEAVV ECCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEE RVGPLRQGPAVAFGGSLPTLLDALNTLHSQPCSGLENLTENPAANAAENPAASGAAAQAT EECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH AQLAKTAGDVAASVESMGHLARRHGLAPQVLARKAVDDALARIVAAAHELVEDINARPIY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TLAGLKALRQARPLHAWLMGGPADCMRTHLAAALGLPVKCPPHAAVANAVGAALTLPTDS HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCC LEVYADTGRGILRVPALDLTENIHRGYSLDALGERARDLLLEKLERGGAHGAAVEITGAE EEEEECCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SFATLDDSGRSSRDMRVVCQAVPGLAGRVVQSH CEEECCCCCCCCCHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MKYTDMKNTADTSVYLLGIDAGGTHTDAVLLMEDPGGHPSGRADASPEGHAAAALNAADD CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCC THVAYAPHVSEQPEKQAVPGAALPRMRILAAAKTPTRHDDMPASIGEVLAALTTALDSDP CEEEECCCCCCCCHHHCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC ILATSGGAALLGRVSRVTLGATLAVNALVQGKADAVGLALSAGPGLAPGRFALGRHVCVV EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCEEEEE PGGLDHRGVEVSPLDVAGLERQAALWKEEGITAVACVSKFSPRNPAHEQAMARAVARAYG CCCCCCCCEEECCCCHHCCHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHC PSLRRDAPSDRVPEAEPAVPGITEGHRLSGRLSFPRRIATAYFNAAVQRLHVSFLEAAES CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALARAGVSAAVRLLKADGGAVPLSLSRQEPVQSILSGPAASVMGVLALCPAACQGCGLLL HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEE DMGGTTTDMALVADGSPVVDRDGMVLQGRRTLVRALASVSIGVGGDSLVSVEGSGHEAVV ECCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEE RVGPLRQGPAVAFGGSLPTLLDALNTLHSQPCSGLENLTENPAANAAENPAASGAAAQAT EECCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH AQLAKTAGDVAASVESMGHLARRHGLAPQVLARKAVDDALARIVAAAHELVEDINARPIY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH TLAGLKALRQARPLHAWLMGGPADCMRTHLAAALGLPVKCPPHAAVANAVGAALTLPTDS HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEECCCCC LEVYADTGRGILRVPALDLTENIHRGYSLDALGERARDLLLEKLERGGAHGAAVEITGAE EEEEECCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC SFATLDDSGRSSRDMRVVCQAVPGLAGRVVQSH CEEECCCCCCCCCHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]