Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905391
Identifier: 220905391
GI number: 220905391
Start: 2565407
End: 2567395
Strand: Reverse
Name: 220905391
Synonym: Ddes_2129
Alternate gene names: NA
Gene position: 2567395-2565407 (Counterclockwise)
Preceding gene: 220905392
Following gene: 220905389
Centisome position: 89.35
GC content: 59.98
Gene sequence:
>1989_bases ATGCCTATGATTCCCGTAAAGGAAGCGATAAAGGGCGTAGCCATTGCCGAACCCGAAGTTAAAGAACATGCGGTTGACCT GCTCATCGTGGGCGGCGGCATGGGATCCTGCGGCACCGCTTTTGAAGCTGTCCGCTGGGGCGAAAAGCACGGCCTGAAAA TTCTGCTTTGCGACAAGGCTTCCCTCGAGCGCTCCGGCGCCGTGGCCCAGGGCCTTTCCGCCATCAACACCTATCTGGGT GAAAACAGCGCCGACGACTACGTGCGCATGGTCCGCACCGACCTTATGGGCCTCGTGCGCGAAGACCTTATCTTCGACTG CGGCCGCCACGTTGACGACTCCGTGCACCTGTTTGAAGACTGGGGCCTGCCCTGCTGGATCAAGGGTGAAGACGGCCACA ACATGAACGGCGCCGCCGCCAAGGCCGCCGGCAAAAGCCTGCGCAAGGGCGACGCCCCCGTGCGTTCCGGCCGTTGGCAG ATCATGATCAACGGTGAATCCTACAAGTGCATCGTGGCCGAAGCTGCCAAGAATGCCCTGGGTGAAGACCGCATCATGGA GCGCATCTTTATCGTGAAGCTGCTGCTCGACAAAAATACTCCCAACCGCATCGCGGGCGCCGTGGGCTTTAACCTGCGCG CCAACGAAGTGCACATCTTCAAAGCCAACACCATCATGGTGGCCGCCGGCGGCGCGGTGAACGTGTACCGCCCCCGTTCC ACCGGTGAAGGCATGGGTCGCGCCTGGTATCCCGTATGGAACGCCGGCTCCACCTACACCATGTGTGCCCAGGTCGGCGC TGAAATGACCATGATGGAAAACCGCTTCGTGCCCGCCCGCTTCAAGGACGGTTACGGCCCCGTGGGCGCGTGGTTCCTGC TCTTCAAGGCCAAAGCCACCAACAGCAAGGGCGAAGACTACTGCGTGACCAACCGTGCCATGCTGAAGCCCTACGAAGAC CGCGGCTACGCCAAGGGCCATGTCATCCCGACCTGCCTGCGTAACCACATGATGCTTCGCGAAATGCGCGAAGGCCGCGG CCCCATCTATATGGACACCAAGACCGCCCTGCAGACCACCTTCGCCACGTTGAACGAAGAACAGCAGAAGGAACTTGAGT CCGAAGCCTGGGAAGACTTCCTCGACATGTGCGTTGGCCAGGCCAACCTGTGGGCCTGCACCAATACCGCCCCTGAAGAG CGCGGTTCCGAAATCATGCCCACCGAACCCTATCTGCTCGGTTCCCACTCCGGTTGCTGCGGCATCTGGGTGTCCGGTCC CGACGAAGAATGGGTGCCTGAAGACTATAAGGTGCGTGCGGCCAACGGCAAGGTCTACAACCGCATGACCACCGTTGAGG GCCTGTTTACCTGCGCCGACGGCGTGGGCGCTTCCGGCCACAAGTTCTCTTCCGGTTCGCATGCTGAAGGCCGTATCGCC GGCAAGCAGATGGTGCGCTGGTGCCTTGACCACAAGGACTTCAAGCCCGAGTTCAAGGAAACCGCCGATGAACTGAAGAA GCTCATCTACCGTCCGTACTACAACTTCATGGCCGGCAAGGACGCCTCCACCGACCCTGTGGTGAACCCCAACTATATCA CGCCCAAGAACTTCATGATGCGTCTTGTGAAGTGCACCGACGAATACGGCGGCGGCGTGAGCACCTACTACACCACCTCC AAGGCTCTGCTCGACACGGGCTTCAACCTGCTTGCCATGATGGAAGAAGACTCCCTCAAGCTGGCCTCCCGTGACCTGCA CGAACTTCTGCGCTGCTGGGAAAACTATCATCGCCTGTGGACGGTGCGTCTGCACATGCAGCACATCTCCTTCCGCGAAG AATCCCGTTACCCCGGCTTCTACTATCGCGCGGACTTCATGGCCCTGGACGACACCAAGTGGAAGTGCTTCGTGAACTCC AAGTACGATCCCGCCACCGGCGAGACCAAGATCTTCAAGAAGCCTTACTACCAGATCATCCCCGACTAG
Upstream 100 bases:
>100_bases GGCAAGAAGTTTGAAATGCTGGAAGCCGACAAGGTTCTTACTTGCATGGAACACGGCCGTTAGGTCTTTGCAACCGCTAG TGCGATAAGGAGATACCATT
Downstream 100 bases:
>100_bases TCGGCGGCATGTAGCACAAAAGGGGCGGCCGCAAGGCCGCCCCCCTTGGCTGTACGCTCTGCTACGGCCAGTGGGTGCAA CAGGCGAAAGGGCGCGGAAT
Product: adenylylsulfate reductase subunit alpha
Products: Adenylylsulfate; reduced acceptor
Alternate protein names: Adenylylsulfate Reductase; Adenylylsulfate Reductase Alpha Subunit; Oxidoreductase; Dissimilatory Adenylylsulfate Reductase Alpha Subunit; FAD Dependent Oxidoreductase; Adenylylsulphate Reductase Alpha Subunit; Biotin Synthetase; Dissimilatory Adenylylsulfate Reductase Subunit Alpha; Adenylylsulfate Reductase Subunit A
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MPMIPVKEAIKGVAIAEPEVKEHAVDLLIVGGGMGSCGTAFEAVRWGEKHGLKILLCDKASLERSGAVAQGLSAINTYLG ENSADDYVRMVRTDLMGLVREDLIFDCGRHVDDSVHLFEDWGLPCWIKGEDGHNMNGAAAKAAGKSLRKGDAPVRSGRWQ IMINGESYKCIVAEAAKNALGEDRIMERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANTIMVAAGGAVNVYRPRS TGEGMGRAWYPVWNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNSKGEDYCVTNRAMLKPYED RGYAKGHVIPTCLRNHMMLREMREGRGPIYMDTKTALQTTFATLNEEQQKELESEAWEDFLDMCVGQANLWACTNTAPEE RGSEIMPTEPYLLGSHSGCCGIWVSGPDEEWVPEDYKVRAANGKVYNRMTTVEGLFTCADGVGASGHKFSSGSHAEGRIA GKQMVRWCLDHKDFKPEFKETADELKKLIYRPYYNFMAGKDASTDPVVNPNYITPKNFMMRLVKCTDEYGGGVSTYYTTS KALLDTGFNLLAMMEEDSLKLASRDLHELLRCWENYHRLWTVRLHMQHISFREESRYPGFYYRADFMALDDTKWKCFVNS KYDPATGETKIFKKPYYQIIPD
Sequences:
>Translated_662_residues MPMIPVKEAIKGVAIAEPEVKEHAVDLLIVGGGMGSCGTAFEAVRWGEKHGLKILLCDKASLERSGAVAQGLSAINTYLG ENSADDYVRMVRTDLMGLVREDLIFDCGRHVDDSVHLFEDWGLPCWIKGEDGHNMNGAAAKAAGKSLRKGDAPVRSGRWQ IMINGESYKCIVAEAAKNALGEDRIMERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANTIMVAAGGAVNVYRPRS TGEGMGRAWYPVWNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNSKGEDYCVTNRAMLKPYED RGYAKGHVIPTCLRNHMMLREMREGRGPIYMDTKTALQTTFATLNEEQQKELESEAWEDFLDMCVGQANLWACTNTAPEE RGSEIMPTEPYLLGSHSGCCGIWVSGPDEEWVPEDYKVRAANGKVYNRMTTVEGLFTCADGVGASGHKFSSGSHAEGRIA GKQMVRWCLDHKDFKPEFKETADELKKLIYRPYYNFMAGKDASTDPVVNPNYITPKNFMMRLVKCTDEYGGGVSTYYTTS KALLDTGFNLLAMMEEDSLKLASRDLHELLRCWENYHRLWTVRLHMQHISFREESRYPGFYYRADFMALDDTKWKCFVNS KYDPATGETKIFKKPYYQIIPD >Mature_661_residues PMIPVKEAIKGVAIAEPEVKEHAVDLLIVGGGMGSCGTAFEAVRWGEKHGLKILLCDKASLERSGAVAQGLSAINTYLGE NSADDYVRMVRTDLMGLVREDLIFDCGRHVDDSVHLFEDWGLPCWIKGEDGHNMNGAAAKAAGKSLRKGDAPVRSGRWQI MINGESYKCIVAEAAKNALGEDRIMERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANTIMVAAGGAVNVYRPRST GEGMGRAWYPVWNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKATNSKGEDYCVTNRAMLKPYEDR GYAKGHVIPTCLRNHMMLREMREGRGPIYMDTKTALQTTFATLNEEQQKELESEAWEDFLDMCVGQANLWACTNTAPEER GSEIMPTEPYLLGSHSGCCGIWVSGPDEEWVPEDYKVRAANGKVYNRMTTVEGLFTCADGVGASGHKFSSGSHAEGRIAG KQMVRWCLDHKDFKPEFKETADELKKLIYRPYYNFMAGKDASTDPVVNPNYITPKNFMMRLVKCTDEYGGGVSTYYTTSK ALLDTGFNLLAMMEEDSLKLASRDLHELLRCWENYHRLWTVRLHMQHISFREESRYPGFYYRADFMALDDTKWKCFVNSK YDPATGETKIFKKPYYQIIPD
Specific function: Unknown
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.99.2
Molecular weight: Translated: 74287; Mature: 74155
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIPVKEAIKGVAIAEPEVKEHAVDLLIVGGGMGSCGTAFEAVRWGEKHGLKILLCDKA CCCCCHHHHHCCCEECCCCHHHCCEEEEEECCCCCCCHHHHHHHHCCHHCCCEEEEECCC SLERSGAVAQGLSAINTYLGENSADDYVRMVRTDLMGLVREDLIFDCGRHVDDSVHLFED CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHCC WGLPCWIKGEDGHNMNGAAAKAAGKSLRKGDAPVRSGRWQIMINGESYKCIVAEAAKNAL CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEHHHHHCC GEDRIMERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANTIMVAAGGAVNVYRPRS CHHHHHHHHHHHHHHHCCCCCHHHHHEEECCEECCEEEEEEECEEEEECCCEEEEECCCC TGEGMGRAWYPVWNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKAT CCCCCCCEECEEECCCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEECC NSKGEDYCVTNRAMLKPYEDRGYAKGHVIPTCLRNHMMLREMREGRGPIYMDTKTALQTT CCCCCCEEEECCHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHH FATLNEEQQKELESEAWEDFLDMCVGQANLWACTNTAPEERGSEIMPTEPYLLGSHSGCC HHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCEEEECCCCEE GIWVSGPDEEWVPEDYKVRAANGKVYNRMTTVEGLFTCADGVGASGHKFSSGSHAEGRIA EEEECCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH GKQMVRWCLDHKDFKPEFKETADELKKLIYRPYYNFMAGKDASTDPVVNPNYITPKNFMM HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH RLVKCTDEYGGGVSTYYTTSKALLDTGFNLLAMMEEDSLKLASRDLHELLRCWENYHRLW HHHHHHHHHCCCEEEEEECHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEE TVRLHMQHISFREESRYPGFYYRADFMALDDTKWKCFVNSKYDPATGETKIFKKPYYQII EEEEEEEHHCHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEECCCCEEEC PD CC >Mature Secondary Structure PMIPVKEAIKGVAIAEPEVKEHAVDLLIVGGGMGSCGTAFEAVRWGEKHGLKILLCDKA CCCCHHHHHCCCEECCCCHHHCCEEEEEECCCCCCCHHHHHHHHCCHHCCCEEEEECCC SLERSGAVAQGLSAINTYLGENSADDYVRMVRTDLMGLVREDLIFDCGRHVDDSVHLFED CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHCC WGLPCWIKGEDGHNMNGAAAKAAGKSLRKGDAPVRSGRWQIMINGESYKCIVAEAAKNAL CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEHHHHHCC GEDRIMERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANTIMVAAGGAVNVYRPRS CHHHHHHHHHHHHHHHCCCCCHHHHHEEECCEECCEEEEEEECEEEEECCCEEEEECCCC TGEGMGRAWYPVWNAGSTYTMCAQVGAEMTMMENRFVPARFKDGYGPVGAWFLLFKAKAT CCCCCCCEECEEECCCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEECC NSKGEDYCVTNRAMLKPYEDRGYAKGHVIPTCLRNHMMLREMREGRGPIYMDTKTALQTT CCCCCCEEEECCHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHH FATLNEEQQKELESEAWEDFLDMCVGQANLWACTNTAPEERGSEIMPTEPYLLGSHSGCC HHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCEEEECCCCEE GIWVSGPDEEWVPEDYKVRAANGKVYNRMTTVEGLFTCADGVGASGHKFSSGSHAEGRIA EEEECCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH GKQMVRWCLDHKDFKPEFKETADELKKLIYRPYYNFMAGKDASTDPVVNPNYITPKNFMM HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH RLVKCTDEYGGGVSTYYTTSKALLDTGFNLLAMMEEDSLKLASRDLHELLRCWENYHRLW HHHHHHHHHCCCEEEEEECHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEE TVRLHMQHISFREESRYPGFYYRADFMALDDTKWKCFVNSKYDPATGETKIFKKPYYQII EEEEEEEHHCHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEECCCCEEEC PD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: AMP; sulfite; acceptor
Specific reaction: AMP + sulfite + acceptor = adenylyl sulfate + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA