Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905386
Identifier: 220905386
GI number: 220905386
Start: 2559486
End: 2560211
Strand: Reverse
Name: 220905386
Synonym: Ddes_2124
Alternate gene names: NA
Gene position: 2560211-2559486 (Counterclockwise)
Preceding gene: 220905387
Following gene: 220905374
Centisome position: 89.1
GC content: 57.99
Gene sequence:
>726_bases ATGTCCGATACATCTCGCAAAGTTTTTCCTGTGGAGTCCGTGCTTGCCCTCGTGGTGGGTAAGGAAGGCGTGGACGTGAA GGAAATTGCCGGTTTTGTGGCCGGGCGTACCATCGTCTGTGATACCTGCGCCAGGGCCGTGGGGCCTTTTGCCGCCACCT GGCTGGCCCGCTGCTATCCCAAGTTTGCAGAACTGGAATGGAAAGAGGGACAGTCCTGGGACGCTTTTGTGAATAACGGC AGAAGCCTGCTTGGTGATAATGTTTCTCTGCCCGCCATGGATGGTCATACCAAGGCTATGGTTGACCATGTTGTTGATTA CCTTGGCGAAACATATGACAGTCTGGCCGCGCAGACCGCGGCTGCCACCGCTCTTGAAGAGCGCGTGCGCGTTCTTGAGC CTGCCGAAGCCCGCGCCGAGGCCCTGTCCAAAAAAGTGGATGAGCTGGAAGCCAAGATCAAGGCCATGAATGCTGATATG GGCGGCCTGCGCCGTCAGGTGGCTGAATTCCAGGGCAAGGTTGCCATCAATCATGACGACCTGCTTGTGAATATCAAAGA CGCCATCAAGGACGGCCTCAAGGGCATGGTTATGGCTGGCGGCGCCGGAGCCGCTCTTGCCGCTTCCGGCGACGAGGCCG TTGCTGAAGCCGTGGAAGAAAGCGCCGTACCTGACGATTTCGGCTTTGGTGCTTCCGGCGCCAACTCCGACGGCTTTGGT TTCTAG
Upstream 100 bases:
>100_bases GCGTTCCCGGCGGTCAGCCGCCGGGAACGCCGACAGAGTGTGCACTGTTGGCATTAAAGTTTTATTGAATAAAATTACGA TCTCCGAGGAGGAGGCCGCC
Downstream 100 bases:
>100_bases AGCAGTTGCCAGCGGTTTATTATAAAAGACCGCAACCGCAGGGCGAAGCCCGCCCGGTATGCCGGACCTTCCCCCTGCCG CGAGGCGGGTTGGGAAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSDTSRKVFPVESVLALVVGKEGVDVKEIAGFVAGRTIVCDTCARAVGPFAATWLARCYPKFAELEWKEGQSWDAFVNNG RSLLGDNVSLPAMDGHTKAMVDHVVDYLGETYDSLAAQTAAATALEERVRVLEPAEARAEALSKKVDELEAKIKAMNADM GGLRRQVAEFQGKVAINHDDLLVNIKDAIKDGLKGMVMAGGAGAALAASGDEAVAEAVEESAVPDDFGFGASGANSDGFG F
Sequences:
>Translated_241_residues MSDTSRKVFPVESVLALVVGKEGVDVKEIAGFVAGRTIVCDTCARAVGPFAATWLARCYPKFAELEWKEGQSWDAFVNNG RSLLGDNVSLPAMDGHTKAMVDHVVDYLGETYDSLAAQTAAATALEERVRVLEPAEARAEALSKKVDELEAKIKAMNADM GGLRRQVAEFQGKVAINHDDLLVNIKDAIKDGLKGMVMAGGAGAALAASGDEAVAEAVEESAVPDDFGFGASGANSDGFG F >Mature_240_residues SDTSRKVFPVESVLALVVGKEGVDVKEIAGFVAGRTIVCDTCARAVGPFAATWLARCYPKFAELEWKEGQSWDAFVNNGR SLLGDNVSLPAMDGHTKAMVDHVVDYLGETYDSLAAQTAAATALEERVRVLEPAEARAEALSKKVDELEAKIKAMNADMG GLRRQVAEFQGKVAINHDDLLVNIKDAIKDGLKGMVMAGGAGAALAASGDEAVAEAVEESAVPDDFGFGASGANSDGFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25328; Mature: 25197
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSRKVFPVESVLALVVGKEGVDVKEIAGFVAGRTIVCDTCARAVGPFAATWLARCYP CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH KFAELEWKEGQSWDAFVNNGRSLLGDNVSLPAMDGHTKAMVDHVVDYLGETYDSLAAQTA HHHCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AATALEERVRVLEPAEARAEALSKKVDELEAKIKAMNADMGGLRRQVAEFQGKVAINHDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCC LLVNIKDAIKDGLKGMVMAGGAGAALAASGDEAVAEAVEESAVPDDFGFGASGANSDGFG EEEEHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC F C >Mature Secondary Structure SDTSRKVFPVESVLALVVGKEGVDVKEIAGFVAGRTIVCDTCARAVGPFAATWLARCYP CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH KFAELEWKEGQSWDAFVNNGRSLLGDNVSLPAMDGHTKAMVDHVVDYLGETYDSLAAQTA HHHCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AATALEERVRVLEPAEARAEALSKKVDELEAKIKAMNADMGGLRRQVAEFQGKVAINHDD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCC LLVNIKDAIKDGLKGMVMAGGAGAALAASGDEAVAEAVEESAVPDDFGFGASGANSDGFG EEEEHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA