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The map label for this gene is dcrA [H]

Identifier: 220905374

GI number: 220905374

Start: 2545662

End: 2547989

Strand: Reverse

Name: dcrA [H]

Synonym: Ddes_2112

Alternate gene names: 220905374

Gene position: 2547989-2545662 (Counterclockwise)

Preceding gene: 220905386

Following gene: 220905372

Centisome position: 88.67

GC content: 60.35

Gene sequence:

>2328_bases
ATGCGACAGATACGCATCAACACCATATGCACAGTTTCCATAACGGCATCCGTTTTCATCATTATCGCGGTTCTGGTCGC
ATATGTTTCCTTGTCTTCGTACCGCATGGTTTCGGGAGTCCAGAGCGAGGCCCTGGACCAGACGGCCCGTCTTGTGGCGC
AGTCTGCCCAGAACTATATTGAGCAGTCTGTGGACGTGGCGACCATCCTTGCGGGGCAGGAGCACGTGCGGGAGGCCCTC
GCGGGTTCGCCCCGGGCCGCGGAGGAAGTGCAGCAGATGTTGCACACCTATGTGAAATCTTTTCCCTCGTACTGGTCTTT
TTTTGTTTTTGACGTCAAGGGGCGCATTGTGGCGGGGCTGAATGCCGCCCTGACCGACATGACCGGCGGGGACCGGTTTG
ACCGCGACTACAGCAAGGCCATTTTCAGCGGTAAGGATCTGGCTTTCAGCGGCAGCGTCATGGGGGCCACCACGGACCCC
ACTATGCTGGTATATGTGGTGACCAAGGCTGTGTACGCCCCTGACGGCAGCCTGCTCGGCGCTGTGTCCGTATGCCCGCG
CTGGAGTGACTTTACCGCCAAGACCATCGATCCCATACGCCTGGGCCAGCGTGGCTACGGCTTTGCGCTGGATACCAGGG
GGCGGCTGATCGCCCACGGCACCAACAAAAAGCTGCTGCTGAAAGACCTTTCGGGCGAAGATTTTATCGCCAGGGCCATG
AAGGCCCAGAAGGGCGTTATCGAGTACCCGTGGGAAGGCGAAAAGAAATTCATGACGGTAGCGGCCATTCCGGCCACGGG
CTGGCTTGTGTGCATGAGCGCCTATGACGCCGAACTGGCGGCTCCCGCCACGGAACAGAGCCTGGTTCTGTGCGGGGTAG
GGCTGGCTGCCATCGCGTTGCTGGCCGGGTTGCTGACCTATATCAACCAGCATTTTGTGTTCAGGCCGCTGCGCGCGCTG
AGCAGTTTTACCGAAAAAGTGGCTTCCGGCGACCTCAAGGCCGAAATGCAGGGCCGCTTCAGGGCCGAAATGGCTGCTTT
TGCCGGTCATCTGCGTGATATGGTCGAAGAGCTCAAGCAGCGTCTCGGCTTTTCTCAGGGCGTGCTGGACGGTATTCCCA
CTCCTTGCGGTATTGTGGGACCGGATTTCAACATGATCTGGGTCAATGACGAAATATGCCGCCTGCTCGAAAAAACCGGT
CCGCGCGATTCCTGGACCGGGCAGCGTTCCGGTTTGTTTTTTTACGATGATGCCGGGCGGGAAACACTGTCAGACCGGGC
CATTATGGAGCGCAAAAGTCTGTCGCTGGAGTTTGACCACACGACCCCCTCAGGCCGCAAGCTGCGCGTCGCCGTGCACA
CCACGCCGTTCTACAATCTTGACGGTGCGCTTCTTGGGTCCATTGCCTTCTGGAATGATCTGACCGAGATATACAATCAG
AAAAGCCGCATCGAAGCGCAGAACGAGACCATAGCCAGAGCCGCTGCCGAAGCGTCGCATCTGGTGGAGGAAATGGCCGG
GGCGTCGCGGCGTCTTTCAGAGCAGATCGACCATTCCAGCCAGGGCGCGCGCGAGCAGAGCACCCGCGTTTACCAGACGG
CCACCGCGGTTGAAGAAATGAACGCAACCATTATGGAAGTGGCAAAAAATGCCGCAGCTACCTCGCAAAGCGCCAATACC
GCCAAGCAGGAAGCGCAGAGCGGCGCACACCTGGTCACGCAGGTGACCGCTGCCGTACAGTCCATCCACGAAGAGGCTTC
GCGCATGACAGGTATCATGAGTGATCTCGGCCGCCAGGCGCAGGGCATTGGAACCGTCATGGGCGTTATTTCCGACATCG
CCGACCAGACAAACCTTCTGGCACTCAATGCCGCCATTGAGGCTGCCCGCGCCGGTGAAGCCGGACGCGGCTTTGCCGTG
GTTGCCGACGAGGTGCGCAAGCTGGCCGAAAAAACGGCTCAGGCCACTACCGAGGTGCGCCAGGCCATCGGCGGCATCCA
GCAGGGTACAACGGCGGCCGTAAGCCAGATGGAAGAAGCGGGCAGGCGCGTGGGCGAAGCCACGGACCTGGCCCATCGCT
CGGGCGAAGCCATTGCCCAGGTTGTCCATATGGTGGAAAACGCCGGCGACCAGGTGCACTCCATTGCCACGGCGGCAGAG
GAGCAGTCCGCCACCTCCGAGGAAATCAACCGGGCCATCAACTCTATCAGCGACATTGCCGCCGCCACAGATCAGGCCAT
GAGCCAGTGCACGGCTGCCATTGCGGACCTGGCCCGGCAGGCCCGTGACCTTGAAAAACTCATCGCGGGTTTGCGCTCGG
GCGCGTAA

Upstream 100 bases:

>100_bases
CATGAATTATATGTTTTTGCATAATAAAAATGGTTGTCAACAAGCCGGGCCTGTCATACATGGCTAAGACTTTGTTCACC
TCAGCGTCAGGGGGCGCATA

Downstream 100 bases:

>100_bases
CCGTATTCTTTGTACTGTCCGACCAGGCCCTGCCCGGGGCCGTACAAAGACCGGCACGAACCGGGACGGGCGGGCACGGC
TGAAGCCGCGCTCCACCAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MRQIRINTICTVSITASVFIIIAVLVAYVSLSSYRMVSGVQSEALDQTARLVAQSAQNYIEQSVDVATILAGQEHVREAL
AGSPRAAEEVQQMLHTYVKSFPSYWSFFVFDVKGRIVAGLNAALTDMTGGDRFDRDYSKAIFSGKDLAFSGSVMGATTDP
TMLVYVVTKAVYAPDGSLLGAVSVCPRWSDFTAKTIDPIRLGQRGYGFALDTRGRLIAHGTNKKLLLKDLSGEDFIARAM
KAQKGVIEYPWEGEKKFMTVAAIPATGWLVCMSAYDAELAAPATEQSLVLCGVGLAAIALLAGLLTYINQHFVFRPLRAL
SSFTEKVASGDLKAEMQGRFRAEMAAFAGHLRDMVEELKQRLGFSQGVLDGIPTPCGIVGPDFNMIWVNDEICRLLEKTG
PRDSWTGQRSGLFFYDDAGRETLSDRAIMERKSLSLEFDHTTPSGRKLRVAVHTTPFYNLDGALLGSIAFWNDLTEIYNQ
KSRIEAQNETIARAAAEASHLVEEMAGASRRLSEQIDHSSQGAREQSTRVYQTATAVEEMNATIMEVAKNAAATSQSANT
AKQEAQSGAHLVTQVTAAVQSIHEEASRMTGIMSDLGRQAQGIGTVMGVISDIADQTNLLALNAAIEAARAGEAGRGFAV
VADEVRKLAEKTAQATTEVRQAIGGIQQGTTAAVSQMEEAGRRVGEATDLAHRSGEAIAQVVHMVENAGDQVHSIATAAE
EQSATSEEINRAINSISDIAAATDQAMSQCTAAIADLARQARDLEKLIAGLRSGA

Sequences:

>Translated_775_residues
MRQIRINTICTVSITASVFIIIAVLVAYVSLSSYRMVSGVQSEALDQTARLVAQSAQNYIEQSVDVATILAGQEHVREAL
AGSPRAAEEVQQMLHTYVKSFPSYWSFFVFDVKGRIVAGLNAALTDMTGGDRFDRDYSKAIFSGKDLAFSGSVMGATTDP
TMLVYVVTKAVYAPDGSLLGAVSVCPRWSDFTAKTIDPIRLGQRGYGFALDTRGRLIAHGTNKKLLLKDLSGEDFIARAM
KAQKGVIEYPWEGEKKFMTVAAIPATGWLVCMSAYDAELAAPATEQSLVLCGVGLAAIALLAGLLTYINQHFVFRPLRAL
SSFTEKVASGDLKAEMQGRFRAEMAAFAGHLRDMVEELKQRLGFSQGVLDGIPTPCGIVGPDFNMIWVNDEICRLLEKTG
PRDSWTGQRSGLFFYDDAGRETLSDRAIMERKSLSLEFDHTTPSGRKLRVAVHTTPFYNLDGALLGSIAFWNDLTEIYNQ
KSRIEAQNETIARAAAEASHLVEEMAGASRRLSEQIDHSSQGAREQSTRVYQTATAVEEMNATIMEVAKNAAATSQSANT
AKQEAQSGAHLVTQVTAAVQSIHEEASRMTGIMSDLGRQAQGIGTVMGVISDIADQTNLLALNAAIEAARAGEAGRGFAV
VADEVRKLAEKTAQATTEVRQAIGGIQQGTTAAVSQMEEAGRRVGEATDLAHRSGEAIAQVVHMVENAGDQVHSIATAAE
EQSATSEEINRAINSISDIAAATDQAMSQCTAAIADLARQARDLEKLIAGLRSGA
>Mature_775_residues
MRQIRINTICTVSITASVFIIIAVLVAYVSLSSYRMVSGVQSEALDQTARLVAQSAQNYIEQSVDVATILAGQEHVREAL
AGSPRAAEEVQQMLHTYVKSFPSYWSFFVFDVKGRIVAGLNAALTDMTGGDRFDRDYSKAIFSGKDLAFSGSVMGATTDP
TMLVYVVTKAVYAPDGSLLGAVSVCPRWSDFTAKTIDPIRLGQRGYGFALDTRGRLIAHGTNKKLLLKDLSGEDFIARAM
KAQKGVIEYPWEGEKKFMTVAAIPATGWLVCMSAYDAELAAPATEQSLVLCGVGLAAIALLAGLLTYINQHFVFRPLRAL
SSFTEKVASGDLKAEMQGRFRAEMAAFAGHLRDMVEELKQRLGFSQGVLDGIPTPCGIVGPDFNMIWVNDEICRLLEKTG
PRDSWTGQRSGLFFYDDAGRETLSDRAIMERKSLSLEFDHTTPSGRKLRVAVHTTPFYNLDGALLGSIAFWNDLTEIYNQ
KSRIEAQNETIARAAAEASHLVEEMAGASRRLSEQIDHSSQGAREQSTRVYQTATAVEEMNATIMEVAKNAAATSQSANT
AKQEAQSGAHLVTQVTAAVQSIHEEASRMTGIMSDLGRQAQGIGTVMGVISDIADQTNLLALNAAIEAARAGEAGRGFAV
VADEVRKLAEKTAQATTEVRQAIGGIQQGTTAAVSQMEEAGRRVGEATDLAHRSGEAIAQVVHMVENAGDQVHSIATAAE
EQSATSEEINRAINSISDIAAATDQAMSQCTAAIADLARQARDLEKLIAGLRSGA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=245, Percent_Identity=34.6938775510204, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI2367378, Length=228, Percent_Identity=36.4035087719298, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788195, Length=215, Percent_Identity=35.3488372093023, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789453, Length=225, Percent_Identity=32, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1787690, Length=248, Percent_Identity=31.8548387096774, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 83287; Mature: 83287

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIRINTICTVSITASVFIIIAVLVAYVSLSSYRMVSGVQSEALDQTARLVAQSAQNYI
CCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSVDVATILAGQEHVREALAGSPRAAEEVQQMLHTYVKSFPSYWSFFVFDVKGRIVAGL
HHHCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEECCCEEECC
NAALTDMTGGDRFDRDYSKAIFSGKDLAFSGSVMGATTDPTMLVYVVTKAVYAPDGSLLG
HHHHHCCCCCCCCCHHHHHHHHCCCCCEECCCEECCCCCCHHHHHHHHHHHCCCCCCHHH
AVSVCPRWSDFTAKTIDPIRLGQRGYGFALDTRGRLIAHGTNKKLLLKDLSGEDFIARAM
HHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCEEEECCCCEEEEECCCCCHHHHHHH
KAQKGVIEYPWEGEKKFMTVAAIPATGWLVCMSAYDAELAAPATEQSLVLCGVGLAAIAL
HHHCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHH
LAGLLTYINQHFVFRPLRALSSFTEKVASGDLKAEMQGRFRAEMAAFAGHLRDMVEELKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGFSQGVLDGIPTPCGIVGPDFNMIWVNDEICRLLEKTGPRDSWTGQRSGLFFYDDAGR
HCCCCCCHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
ETLSDRAIMERKSLSLEFDHTTPSGRKLRVAVHTTPFYNLDGALLGSIAFWNDLTEIYNQ
HHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCH
KSRIEAQNETIARAAAEASHLVEEMAGASRRLSEQIDHSSQGAREQSTRVYQTATAVEEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
NATIMEVAKNAAATSQSANTAKQEAQSGAHLVTQVTAAVQSIHEEASRMTGIMSDLGRQA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIGTVMGVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTAQATTEVR
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QAIGGIQQGTTAAVSQMEEAGRRVGEATDLAHRSGEAIAQVVHMVENAGDQVHSIATAAE
HHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHH
EQSATSEEINRAINSISDIAAATDQAMSQCTAAIADLARQARDLEKLIAGLRSGA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQIRINTICTVSITASVFIIIAVLVAYVSLSSYRMVSGVQSEALDQTARLVAQSAQNYI
CCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSVDVATILAGQEHVREALAGSPRAAEEVQQMLHTYVKSFPSYWSFFVFDVKGRIVAGL
HHHCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEECCCEEECC
NAALTDMTGGDRFDRDYSKAIFSGKDLAFSGSVMGATTDPTMLVYVVTKAVYAPDGSLLG
HHHHHCCCCCCCCCHHHHHHHHCCCCCEECCCEECCCCCCHHHHHHHHHHHCCCCCCHHH
AVSVCPRWSDFTAKTIDPIRLGQRGYGFALDTRGRLIAHGTNKKLLLKDLSGEDFIARAM
HHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCEEEECCCCEEEEECCCCCHHHHHHH
KAQKGVIEYPWEGEKKFMTVAAIPATGWLVCMSAYDAELAAPATEQSLVLCGVGLAAIAL
HHHCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHH
LAGLLTYINQHFVFRPLRALSSFTEKVASGDLKAEMQGRFRAEMAAFAGHLRDMVEELKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGFSQGVLDGIPTPCGIVGPDFNMIWVNDEICRLLEKTGPRDSWTGQRSGLFFYDDAGR
HCCCCCCHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
ETLSDRAIMERKSLSLEFDHTTPSGRKLRVAVHTTPFYNLDGALLGSIAFWNDLTEIYNQ
HHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCH
KSRIEAQNETIARAAAEASHLVEEMAGASRRLSEQIDHSSQGAREQSTRVYQTATAVEEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
NATIMEVAKNAAATSQSANTAKQEAQSGAHLVTQVTAAVQSIHEEASRMTGIMSDLGRQA
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIGTVMGVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTAQATTEVR
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QAIGGIQQGTTAAVSQMEEAGRRVGEATDLAHRSGEAIAQVVHMVENAGDQVHSIATAAE
HHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHH
EQSATSEEINRAINSISDIAAATDQAMSQCTAAIADLARQARDLEKLIAGLRSGA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]