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The map label for this gene is 220905340

Identifier: 220905340

GI number: 220905340

Start: 2501087

End: 2501692

Strand: Reverse

Name: 220905340

Synonym: Ddes_2078

Alternate gene names: NA

Gene position: 2501692-2501087 (Counterclockwise)

Preceding gene: 220905341

Following gene: 220905339

Centisome position: 87.06

GC content: 58.58

Gene sequence:

>606_bases
ATGCGTATCCGTTATTTTATGCCGCTGGCCCTTCTGCTGAGCCTGATGCTTATTGCCTGCCAACAGGGTGAAGGCTCGTC
CCAGGCCAAACTGGCGGTCGTTGATATGACGCGCGTCATGCGCGACAGCGAAGCCGGCAAGGCCGGCGTGAAGCACCTTG
AAAGTCTGCAGGCCGACATGCAGGCCCAGCTGAACGACATCCAGAAGCGTCTGGAGCAGAACGCCGACGACGCCGATGCA
CAGAAAGAACTGCAGACCGTATATATGGCCTCGCAGCAGCGCATGCAGGTGGAGCAGCAGAACGTTGTGAACGTGCTGTA
TGACACCATGCAGCGCATCATCAACGCTTACCGTGCCGACAAGGGCTACGCCCTCATCATCAGCTCCGAGGCTGCCGCTT
CTTTTGACCCCAAGGCTGACGTGACCAACGATATCATCACGGCCATGGACAAGCAGAAGGTCGACTTCAAGCCCGCGGCC
GAGGCCGAAAAGGCCCCTGAAGCCGAAGCCGGCAAGGACGCCGGACAGGCCGAAAAGCCCGCTGAAAAAGCTGCTGAAAA
GCCTGCCGCAAAGGCTGACAAGGCTGCGAAGGCCGACAAAAAATAA

Upstream 100 bases:

>100_bases
AAACGGTTGAGGTGGCAGTAAAAACAACGTACACCATTGACAACACGCCGCGCAGGCCGTGCAACGCCACGCGGAAATTC
TGAGAGGAGTGTTCATTACC

Downstream 100 bases:

>100_bases
CCTGAGCACCGCGCTTTCCATTGCCGGCCCAAGGCCGGATAATGGCTGTTCAAAAACCCCGTTCCAAGCAGCGGGGTTTT
TGTTTTTTTGTCCGGCCTGC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRIRYFMPLALLLSLMLIACQQGEGSSQAKLAVVDMTRVMRDSEAGKAGVKHLESLQADMQAQLNDIQKRLEQNADDADA
QKELQTVYMASQQRMQVEQQNVVNVLYDTMQRIINAYRADKGYALIISSEAAASFDPKADVTNDIITAMDKQKVDFKPAA
EAEKAPEAEAGKDAGQAEKPAEKAAEKPAAKADKAAKADKK

Sequences:

>Translated_201_residues
MRIRYFMPLALLLSLMLIACQQGEGSSQAKLAVVDMTRVMRDSEAGKAGVKHLESLQADMQAQLNDIQKRLEQNADDADA
QKELQTVYMASQQRMQVEQQNVVNVLYDTMQRIINAYRADKGYALIISSEAAASFDPKADVTNDIITAMDKQKVDFKPAA
EAEKAPEAEAGKDAGQAEKPAEKAAEKPAAKADKAAKADKK
>Mature_201_residues
MRIRYFMPLALLLSLMLIACQQGEGSSQAKLAVVDMTRVMRDSEAGKAGVKHLESLQADMQAQLNDIQKRLEQNADDADA
QKELQTVYMASQQRMQVEQQNVVNVLYDTMQRIINAYRADKGYALIISSEAAASFDPKADVTNDIITAMDKQKVDFKPAA
EAEKAPEAEAGKDAGQAEKPAEKAAEKPAAKADKAAKADKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21990; Mature: 21990

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRYFMPLALLLSLMLIACQQGEGSSQAKLAVVDMTRVMRDSEAGKAGVKHLESLQADM
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAQLNDIQKRLEQNADDADAQKELQTVYMASQQRMQVEQQNVVNVLYDTMQRIINAYRAD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGYALIISSEAAASFDPKADVTNDIITAMDKQKVDFKPAAEAEKAPEAEAGKDAGQAEKP
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCH
AEKAAEKPAAKADKAAKADKK
HHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MRIRYFMPLALLLSLMLIACQQGEGSSQAKLAVVDMTRVMRDSEAGKAGVKHLESLQADM
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAQLNDIQKRLEQNADDADAQKELQTVYMASQQRMQVEQQNVVNVLYDTMQRIINAYRAD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGYALIISSEAAASFDPKADVTNDIITAMDKQKVDFKPAAEAEKAPEAEAGKDAGQAEKP
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCH
AEKAAEKPAAKADKAAKADKK
HHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA