Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is kbl [C]
Identifier: 220905321
GI number: 220905321
Start: 2475913
End: 2477235
Strand: Reverse
Name: kbl [C]
Synonym: Ddes_2059
Alternate gene names: 220905321
Gene position: 2477235-2475913 (Counterclockwise)
Preceding gene: 220905322
Following gene: 220905320
Centisome position: 86.21
GC content: 58.81
Gene sequence:
>1323_bases ATGAAGAAAGACCATTCCTGTCAGGCCGGAAAAGAGGCGGCATCAACAACCGCTGCCGCTACTGAAAGCTCCGCCGGCGG TTTCAGCCGCATGCGTTCCAAGCTCGCCTTTGACCGGCTTGTGGAGATGGGAGCCAAGATGGGGATGGAGAATCCTCTTT TTCTTTGCCACGAGCGCGCGGCCAAGGCCACAACGCTCATTGAAGGCAAGGAATATCTGAACTTTTCCACCTACGATTAT CTGGATATCAACGCCCATCCGGAAATAACCGAGGTCGTCACCGAGGCCGCCGCCGTGTACGGCACTTCTGCCGGAGCCAG CCGTCTTGTGGGTGGCGAGCGCCCGCCCCACCGTGCGCTGGAGCGCGCCTTCGCTGACCTGTACGGCGTGGAAGACAGTA TCGTATACGTGAGCGGCCACGCCACCAACGTATCCACTCTGGGTTTTCTGCTTGGCCACCGCGACGCCATCTTTCACGAC GGTCTGGCCCACAATTCGCTGATTCAGGGCGCACGCCTGTCCCATGCGGCGCGCTACTCGTATAATCACAACGACTGCGA TGCCCTTGAGGAGATTCTCAAGGCCAAGCGCGCAGAGCATAAACGGGCCATTATCGTTACCGAAGGCCTGTTCAGCATGG ACGGCAACATTCCCGACCTGCCCCGCATCATTCAGCTGAAAAAGCAGTACGACTGCATGCTGCTGGTGGACGAGGCGCAC TCGCTGGGCGTGCTAGGCGCAACCGGGCGCGGCGCTCACGAGCACTTCGGCATTGACGCCAACGAAGTGGACATGTGGAT GAGCACGCTCTCCAAGTCCATGTGCGGGTGCGGCGGTTTTATCGCCGGCCGGCATGAGCTGGTGGAATTTCTCAAGTATG GTTCGCCGGGCTTTGTGTTCAGCGTGGGTATGCCCCCGGTTATTGCCGTGGCCTGCCACAAGGCTCTGGACATCATGCTG CGCGAACCGGAACGGGTACACAAGCTGCAGCGGATTTCCAAGTTTTTTGTGGAGTATGCTTCGAGCATCGGCCTTGATAC GGGCGCGGCCCAGGGCTACGCCATTGTACCTGTCATGGTGGGTGACCCCATGGTGGCGGGTTTTCTGTCCAACGCCCTGT TCAAGCGCGGCATCTACGTCATGCCCATCACCTTCCCCGCCGTCAAGGAAGGCACAGACCGGCTGCGTTTCTTCCTTTCG GCCGCCCATACGGAAGAGCATATCCGCAAGGCGCTCGATGCTGTGAAAGAAGAGATTCCCAAGGCGCAGGCCATTGTTGA AAAATACAAAAACGACCACGCCGAAGAATCCCTGGGCGAATAA
Upstream 100 bases:
>100_bases TTTGGCTATACTAAATCCTTACAAAGTTGCGCTCTGTGCCCGGCGGCTCGCCGCAGGGTGCGGATAGGCGCGTTTTTTGG ACAAATTAAGAGGACAAGGC
Downstream 100 bases:
>100_bases AAAATAACACTCCGGCCGGGCCTTATGGCCCGGCTCTCGTTTGCTGCGGAGACCGACATGTCTTTTACCAGTGGCGATGC CACAGAAGCGGGAGCGGAAC
Product: glycine C-acetyltransferase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKKDHSCQAGKEAASTTAAATESSAGGFSRMRSKLAFDRLVEMGAKMGMENPLFLCHERAAKATTLIEGKEYLNFSTYDY LDINAHPEITEVVTEAAAVYGTSAGASRLVGGERPPHRALERAFADLYGVEDSIVYVSGHATNVSTLGFLLGHRDAIFHD GLAHNSLIQGARLSHAARYSYNHNDCDALEEILKAKRAEHKRAIIVTEGLFSMDGNIPDLPRIIQLKKQYDCMLLVDEAH SLGVLGATGRGAHEHFGIDANEVDMWMSTLSKSMCGCGGFIAGRHELVEFLKYGSPGFVFSVGMPPVIAVACHKALDIML REPERVHKLQRISKFFVEYASSIGLDTGAAQGYAIVPVMVGDPMVAGFLSNALFKRGIYVMPITFPAVKEGTDRLRFFLS AAHTEEHIRKALDAVKEEIPKAQAIVEKYKNDHAEESLGE
Sequences:
>Translated_440_residues MKKDHSCQAGKEAASTTAAATESSAGGFSRMRSKLAFDRLVEMGAKMGMENPLFLCHERAAKATTLIEGKEYLNFSTYDY LDINAHPEITEVVTEAAAVYGTSAGASRLVGGERPPHRALERAFADLYGVEDSIVYVSGHATNVSTLGFLLGHRDAIFHD GLAHNSLIQGARLSHAARYSYNHNDCDALEEILKAKRAEHKRAIIVTEGLFSMDGNIPDLPRIIQLKKQYDCMLLVDEAH SLGVLGATGRGAHEHFGIDANEVDMWMSTLSKSMCGCGGFIAGRHELVEFLKYGSPGFVFSVGMPPVIAVACHKALDIML REPERVHKLQRISKFFVEYASSIGLDTGAAQGYAIVPVMVGDPMVAGFLSNALFKRGIYVMPITFPAVKEGTDRLRFFLS AAHTEEHIRKALDAVKEEIPKAQAIVEKYKNDHAEESLGE >Mature_440_residues MKKDHSCQAGKEAASTTAAATESSAGGFSRMRSKLAFDRLVEMGAKMGMENPLFLCHERAAKATTLIEGKEYLNFSTYDY LDINAHPEITEVVTEAAAVYGTSAGASRLVGGERPPHRALERAFADLYGVEDSIVYVSGHATNVSTLGFLLGHRDAIFHD GLAHNSLIQGARLSHAARYSYNHNDCDALEEILKAKRAEHKRAIIVTEGLFSMDGNIPDLPRIIQLKKQYDCMLLVDEAH SLGVLGATGRGAHEHFGIDANEVDMWMSTLSKSMCGCGGFIAGRHELVEFLKYGSPGFVFSVGMPPVIAVACHKALDIML REPERVHKLQRISKFFVEYASSIGLDTGAAQGYAIVPVMVGDPMVAGFLSNALFKRGIYVMPITFPAVKEGTDRLRFFLS AAHTEEHIRKALDAVKEEIPKAQAIVEKYKNDHAEESLGE
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI119220554, Length=387, Percent_Identity=33.5917312661499, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI7657118, Length=346, Percent_Identity=33.5260115606936, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI284448556, Length=346, Percent_Identity=33.5260115606936, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI4758668, Length=366, Percent_Identity=35.2459016393443, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI83977442, Length=346, Percent_Identity=29.4797687861272, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI83977444, Length=347, Percent_Identity=29.3948126801153, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI83977440, Length=347, Percent_Identity=29.6829971181556, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI4502025, Length=355, Percent_Identity=28.7323943661972, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI40316939, Length=355, Percent_Identity=28.7323943661972, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI5454084, Length=268, Percent_Identity=30.2238805970149, Blast_Score=135, Evalue=8e-32, Organism=Escherichia coli, GI1790046, Length=352, Percent_Identity=36.9318181818182, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1786993, Length=351, Percent_Identity=30.4843304843305, Blast_Score=155, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71994529, Length=348, Percent_Identity=34.4827586206897, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17560912, Length=310, Percent_Identity=35.4838709677419, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17560914, Length=311, Percent_Identity=35.3697749196142, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI32566772, Length=365, Percent_Identity=31.5068493150685, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI71982617, Length=276, Percent_Identity=30.7971014492754, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71982625, Length=276, Percent_Identity=30.7971014492754, Blast_Score=150, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320267, Length=360, Percent_Identity=30.5555555555556, Blast_Score=179, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6320438, Length=379, Percent_Identity=28.7598944591029, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323954, Length=271, Percent_Identity=30.6273062730627, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI24662918, Length=349, Percent_Identity=37.8223495702006, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI17136286, Length=361, Percent_Identity=33.5180055401662, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI17137420, Length=381, Percent_Identity=29.1338582677165, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24653280, Length=293, Percent_Identity=31.0580204778157, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24653276, Length=293, Percent_Identity=31.0580204778157, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24653278, Length=293, Percent_Identity=31.0580204778157, Blast_Score=146, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 48049; Mature: 48049
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDHSCQAGKEAASTTAAATESSAGGFSRMRSKLAFDRLVEMGAKMGMENPLFLCHERA CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AKATTLIEGKEYLNFSTYDYLDINAHPEITEVVTEAAAVYGTSAGASRLVGGERPPHRAL HHHHHEECCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHH ERAFADLYGVEDSIVYVSGHATNVSTLGFLLGHRDAIFHDGLAHNSLIQGARLSHAARYS HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHCHHHHHHHHCC YNHNDCDALEEILKAKRAEHKRAIIVTEGLFSMDGNIPDLPRIIQLKKQYDCMLLVDEAH CCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCHHHHHHHHCCCEEEEEECCC SLGVLGATGRGAHEHFGIDANEVDMWMSTLSKSMCGCGGFIAGRHELVEFLKYGSPGFVF CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCCCCEEE SVGMPPVIAVACHKALDIMLREPERVHKLQRISKFFVEYASSIGLDTGAAQGYAIVPVMV ECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE GDPMVAGFLSNALFKRGIYVMPITFPAVKEGTDRLRFFLSAAHTEEHIRKALDAVKEEIP CCHHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KAQAIVEKYKNDHAEESLGE HHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MKKDHSCQAGKEAASTTAAATESSAGGFSRMRSKLAFDRLVEMGAKMGMENPLFLCHERA CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AKATTLIEGKEYLNFSTYDYLDINAHPEITEVVTEAAAVYGTSAGASRLVGGERPPHRAL HHHHHEECCHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHH ERAFADLYGVEDSIVYVSGHATNVSTLGFLLGHRDAIFHDGLAHNSLIQGARLSHAARYS HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHCHHHHHHHHCC YNHNDCDALEEILKAKRAEHKRAIIVTEGLFSMDGNIPDLPRIIQLKKQYDCMLLVDEAH CCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCHHHHHHHHCCCEEEEEECCC SLGVLGATGRGAHEHFGIDANEVDMWMSTLSKSMCGCGGFIAGRHELVEFLKYGSPGFVF CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCCCCEEE SVGMPPVIAVACHKALDIMLREPERVHKLQRISKFFVEYASSIGLDTGAAQGYAIVPVMV ECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE GDPMVAGFLSNALFKRGIYVMPITFPAVKEGTDRLRFFLSAAHTEEHIRKALDAVKEEIP CCHHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KAQAIVEKYKNDHAEESLGE HHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA