Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905306
Identifier: 220905306
GI number: 220905306
Start: 2457736
End: 2458740
Strand: Reverse
Name: 220905306
Synonym: Ddes_2044
Alternate gene names: NA
Gene position: 2458740-2457736 (Counterclockwise)
Preceding gene: 220905307
Following gene: 220905305
Centisome position: 85.57
GC content: 62.09
Gene sequence:
>1005_bases ATGAAAAAAAGATTATATATACTGCTTGCCTGCCTTATGGCTCTGCTCCTTGCGGGTTGCGACTCCGGCGGCAATGAAGA CGCCTCTTCCGCAGCAAAGGAACAGGCACGGCAAGCGCCGGAAACGGATCGCGCCGGGGCCGACAGGGCTTCGCAGGACC GCTTGCCCTATGAAGAGCAGGTTCAGGGGCCGCCGCCCTCACAGGAAGAGCTTGAAAAAGCCGACGCCCTGGTGGCTTTC TATAACGTGGCTGCGGCCACTCTGGCCGAACCCTACTATGCCCAGGCCGAGGCTATGCTGGAAAATGTGCGCCATTACCT GCGGGAATGGACGTTGCCCCCGCGTCCTGCGCCTGGTGGGGATGGCAAGGTGCTTGCGCGTCGTCTGGCGGCTCCTGCGG ATATGTTCGGCGAGGATGCAGCCGCGGCCCTTTCCCAGTGGGTCGAAGATATGGAAAAGAGCATCCAGAGCATGCGGGCC GACTACGCGACGCTGGGGCGCTATGTGCGGGATGAAAATATCCGCGATGATGGCGTGAAGGGCCGCGCCCTGGCGGCCAG TCTGGAAAAGGGGCATGAGCGCTTTATGGCCGCCCGGGACGGGTATCTGGCCCTTGTGGAGGAGCGGGCCGTCAAAGCCG AAGAAGCGCTGCTTTACGGGCATCCGCTCAGGCGGCAGATTCTGGAAGCCAGAAATATTTTCAGCCTGTACGTCACCGCG GCGGAGCTGCTGGCCGCCCAGACACCCGACCGCCAGGCTCTCGGGCAGGTGCGGAGCAGGCTTGAGGCCGGGCTGCGCCG GGCCGGGCAGCCGCCATTTCCGGCTGCCCCGGAGGTGGAGCGGGCCTATCGTGATTTTCTTAAACAGGCTGCCCGGTATG AGGTTTTTCTGGCCCGGGGGCTGGACGAAGGCTTTTACAGCCCGGTGCGGCAGGAACTGAACAATACCGCCCAGGAAAGT CGTCAGGCCTATAATATTTTTGTACGCACGGCCAATTCCAACTGA
Upstream 100 bases:
>100_bases ACGGGTCTCAATGACTGGATTGCGGCCCGCGTGGCCTCGGCCTGAGCAACGTATAACAGCACGCCCCGCAGGTTGCCTGT GGGGCTTTTGCGTCTGAACT
Downstream 100 bases:
>100_bases ACAGGCCTTTCCGGCGCGGAAAGCAGTGCGGCATTTTCAGACAGGGCAAAAATCCCTGCGGCCTGCAAGGCGCAGCGCAA GGTTTTATGAAAAGAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKKRLYILLACLMALLLAGCDSGGNEDASSAAKEQARQAPETDRAGADRASQDRLPYEEQVQGPPPSQEELEKADALVAF YNVAAATLAEPYYAQAEAMLENVRHYLREWTLPPRPAPGGDGKVLARRLAAPADMFGEDAAAALSQWVEDMEKSIQSMRA DYATLGRYVRDENIRDDGVKGRALAASLEKGHERFMAARDGYLALVEERAVKAEEALLYGHPLRRQILEARNIFSLYVTA AELLAAQTPDRQALGQVRSRLEAGLRRAGQPPFPAAPEVERAYRDFLKQAARYEVFLARGLDEGFYSPVRQELNNTAQES RQAYNIFVRTANSN
Sequences:
>Translated_334_residues MKKRLYILLACLMALLLAGCDSGGNEDASSAAKEQARQAPETDRAGADRASQDRLPYEEQVQGPPPSQEELEKADALVAF YNVAAATLAEPYYAQAEAMLENVRHYLREWTLPPRPAPGGDGKVLARRLAAPADMFGEDAAAALSQWVEDMEKSIQSMRA DYATLGRYVRDENIRDDGVKGRALAASLEKGHERFMAARDGYLALVEERAVKAEEALLYGHPLRRQILEARNIFSLYVTA AELLAAQTPDRQALGQVRSRLEAGLRRAGQPPFPAAPEVERAYRDFLKQAARYEVFLARGLDEGFYSPVRQELNNTAQES RQAYNIFVRTANSN >Mature_334_residues MKKRLYILLACLMALLLAGCDSGGNEDASSAAKEQARQAPETDRAGADRASQDRLPYEEQVQGPPPSQEELEKADALVAF YNVAAATLAEPYYAQAEAMLENVRHYLREWTLPPRPAPGGDGKVLARRLAAPADMFGEDAAAALSQWVEDMEKSIQSMRA DYATLGRYVRDENIRDDGVKGRALAASLEKGHERFMAARDGYLALVEERAVKAEEALLYGHPLRRQILEARNIFSLYVTA AELLAAQTPDRQALGQVRSRLEAGLRRAGQPPFPAAPEVERAYRDFLKQAARYEVFLARGLDEGFYSPVRQELNNTAQES RQAYNIFVRTANSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37035; Mature: 37035
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLYILLACLMALLLAGCDSGGNEDASSAAKEQARQAPETDRAGADRASQDRLPYEEQ CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VQGPPPSQEELEKADALVAFYNVAAATLAEPYYAQAEAMLENVRHYLREWTLPPRPAPGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DGKVLARRLAAPADMFGEDAAAALSQWVEDMEKSIQSMRADYATLGRYVRDENIRDDGVK CHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GRALAASLEKGHERFMAARDGYLALVEERAVKAEEALLYGHPLRRQILEARNIFSLYVTA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AELLAAQTPDRQALGQVRSRLEAGLRRAGQPPFPAAPEVERAYRDFLKQAARYEVFLARG HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LDEGFYSPVRQELNNTAQESRQAYNIFVRTANSN CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC >Mature Secondary Structure MKKRLYILLACLMALLLAGCDSGGNEDASSAAKEQARQAPETDRAGADRASQDRLPYEEQ CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH VQGPPPSQEELEKADALVAFYNVAAATLAEPYYAQAEAMLENVRHYLREWTLPPRPAPGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DGKVLARRLAAPADMFGEDAAAALSQWVEDMEKSIQSMRADYATLGRYVRDENIRDDGVK CHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GRALAASLEKGHERFMAARDGYLALVEERAVKAEEALLYGHPLRRQILEARNIFSLYVTA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AELLAAQTPDRQALGQVRSRLEAGLRRAGQPPFPAAPEVERAYRDFLKQAARYEVFLARG HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC LDEGFYSPVRQELNNTAQESRQAYNIFVRTANSN CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA