Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220905294
Identifier: 220905294
GI number: 220905294
Start: 2444539
End: 2445207
Strand: Reverse
Name: 220905294
Synonym: Ddes_2032
Alternate gene names: NA
Gene position: 2445207-2444539 (Counterclockwise)
Preceding gene: 220905299
Following gene: 220905293
Centisome position: 85.1
GC content: 55.01
Gene sequence:
>669_bases ATGCCTGAACTGCAACAGAATATCGTGGACGATCTCGCCTCCGTGACCACTGAATCCTGGCGTACCTTCCGCATCATGGC CGAAATGGTAGAAGCCCTGGACACCCTCAATGCGCTCAAGGTCAACTGCATCTCCATTTTCGGCTCTGCACGCAGCACCG CCGAAACGCAGGAATACAAGGATGCGGAAAAAATCGCCAAACTTCTGGTAGATGCTGGTTTCGGCATCATCACCGGCGGC GGTCCCGGCGTTATGGAGGCGGCCAACAAGGGCGCAAGCGAGGCCGGGGGCGAGTCTGTCGGGCTGCACATCCATCTGCC GCACGAGCAGGGTTGCAACCAGTACGTTAAAACCCGCTGTAATTTCCGCTACTTCTTCATCCGCAAATTCATGTTCGTCA AATACGCCATGGCGTATGTGGTCATGCCTGGCGGTATGGGAACCATTGACGAACTTTCTGAAGCTTTTGTTCTGGCCCAG ACCGGCCGTACGCGCCCCTTTCCCATAGTGCTGTATGACTCCAGCTTCTGGAGCGGCATGGTGGAATGGCTGCGCAAGAA CATGGCCGGGCGCGGCTTTATTAACGAGAAGGAAATAGACCGGCTTATTACCGTATGTGATACGCCGGAAGAAGTGGTCA ACCATCTGCGCAAGATTGTCATCCTTTAG
Upstream 100 bases:
>100_bases CCTGCGGGCGGCAGGGTACATTCATGCGCTTCCGCCCCGGGCGGCTAACCGGCCGCAAGCCCCGCTGCCCGGAATACCGG AAGATACAAAAGGAGTATCC
Downstream 100 bases:
>100_bases GATACCGCATGTGGCGTGATGTGCCGGACGCTTCTTTCCCCTTCCCCGGCGGGTCACGCCTCCGGGGCGGGGGATTTCGC GCTTTTGCACCTGCCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPELQQNIVDDLASVTTESWRTFRIMAEMVEALDTLNALKVNCISIFGSARSTAETQEYKDAEKIAKLLVDAGFGIITGG GPGVMEAANKGASEAGGESVGLHIHLPHEQGCNQYVKTRCNFRYFFIRKFMFVKYAMAYVVMPGGMGTIDELSEAFVLAQ TGRTRPFPIVLYDSSFWSGMVEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHLRKIVIL
Sequences:
>Translated_222_residues MPELQQNIVDDLASVTTESWRTFRIMAEMVEALDTLNALKVNCISIFGSARSTAETQEYKDAEKIAKLLVDAGFGIITGG GPGVMEAANKGASEAGGESVGLHIHLPHEQGCNQYVKTRCNFRYFFIRKFMFVKYAMAYVVMPGGMGTIDELSEAFVLAQ TGRTRPFPIVLYDSSFWSGMVEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHLRKIVIL >Mature_221_residues PELQQNIVDDLASVTTESWRTFRIMAEMVEALDTLNALKVNCISIFGSARSTAETQEYKDAEKIAKLLVDAGFGIITGGG PGVMEAANKGASEAGGESVGLHIHLPHEQGCNQYVKTRCNFRYFFIRKFMFVKYAMAYVVMPGGMGTIDELSEAFVLAQT GRTRPFPIVLYDSSFWSGMVEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHLRKIVIL
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24756; Mature: 24625
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELQQNIVDDLASVTTESWRTFRIMAEMVEALDTLNALKVNCISIFGSARSTAETQEYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DAEKIAKLLVDAGFGIITGGGPGVMEAANKGASEAGGESVGLHIHLPHEQGCNQYVKTRC HHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHC NFRYFFIRKFMFVKYAMAYVVMPGGMGTIDELSEAFVLAQTGRTRPFPIVLYDSSFWSGM CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH VEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHLRKIVIL HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure PELQQNIVDDLASVTTESWRTFRIMAEMVEALDTLNALKVNCISIFGSARSTAETQEYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DAEKIAKLLVDAGFGIITGGGPGVMEAANKGASEAGGESVGLHIHLPHEQGCNQYVKTRC HHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHC NFRYFFIRKFMFVKYAMAYVVMPGGMGTIDELSEAFVLAQTGRTRPFPIVLYDSSFWSGM CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH VEWLRKNMAGRGFINEKEIDRLITVCDTPEEVVNHLRKIVIL HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA