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The map label for this gene is tadA [H]

Identifier: 220905293

GI number: 220905293

Start: 2443943

End: 2444530

Strand: Reverse

Name: tadA [H]

Synonym: Ddes_2031

Alternate gene names: 220905293

Gene position: 2444530-2443943 (Counterclockwise)

Preceding gene: 220905294

Following gene: 220905292

Centisome position: 85.07

GC content: 68.03

Gene sequence:

>588_bases
ATGTGGCGTGATGTGCCGGACGCTTCTTTCCCCTTCCCCGGCGGGTCACGCCTCCGGGGCGGGGGATTTCGCGCTTTTGC
ACCTGCCGGGCCGGTGCCAGCGGCCCCGCCCGGTCACACATGGGAATGCCTCATGGATCGCGCCCTTGACCGGGCGCGCC
ACGCTGCCGCCCTGGGGGAAGTTCCCGTGGGGGCAGTGCTGGTTGCGCCTGACGGCAGGGTGCTGGCCGAAGAGGGCAAT
GCCCCGGTGGCCCTGAGCGATCCCACGGCCCATGCCGAAATACTGGCGTTACGCCGCGCGGGTCAGATGCTTGGCAATTA
CCGGCTTGGCGGCTGCGTACTGGTGGTTACCCTGGAGCCGTGCGCCATGTGCGCGGCGGCCTGCATCCATGCCCGGCTGG
CCGGGCTTGTTTACGGTGCAGCGGACGATCTGGCCGGCGCCGTTGTTTCCCGCGCGGAATATTTTGACGCCCAGAGCGCC
AATCACAGCCTGTGGCACATGGGGGGCGTGCGCGGCGAAGAGTGCGCGACGCTGTTGCGTGATTTTTTTGCCGTGCGGCG
TGAGCGCGCAGATTTTTCCCCCGGGTAG

Upstream 100 bases:

>100_bases
TTATTAACGAGAAGGAAATAGACCGGCTTATTACCGTATGTGATACGCCGGAAGAAGTGGTCAACCATCTGCGCAAGATT
GTCATCCTTTAGGATACCGC

Downstream 100 bases:

>100_bases
CGGCCCTGCCCGGTTTTCCGGCCGGATGCCCTAGCGGTTCTGCACATTGCTGCAGGAGGTCAGACGTTCTGTTTCTGAGA
CAGCATTTTTTCATTGGGTC

Product: CMP/dCMP deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MWRDVPDASFPFPGGSRLRGGGFRAFAPAGPVPAAPPGHTWECLMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGN
APVALSDPTAHAEILALRRAGQMLGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSA
NHSLWHMGGVRGEECATLLRDFFAVRRERADFSPG

Sequences:

>Translated_195_residues
MWRDVPDASFPFPGGSRLRGGGFRAFAPAGPVPAAPPGHTWECLMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGN
APVALSDPTAHAEILALRRAGQMLGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSA
NHSLWHMGGVRGEECATLLRDFFAVRRERADFSPG
>Mature_195_residues
MWRDVPDASFPFPGGSRLRGGGFRAFAPAGPVPAAPPGHTWECLMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGN
APVALSDPTAHAEILALRRAGQMLGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSA
NHSLWHMGGVRGEECATLLRDFFAVRRERADFSPG

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=147, Percent_Identity=47.6190476190476, Blast_Score=122, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17554608, Length=106, Percent_Identity=34.9056603773585, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17555996, Length=87, Percent_Identity=37.9310344827586, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=35.6164383561644, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 20459; Mature: 20459

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRDVPDASFPFPGGSRLRGGGFRAFAPAGPVPAAPPGHTWECLMDRALDRARHAAALGE
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAGQMLGNYRLGGCVLVVTLEP
CCCCEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
CAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSANHSLWHMGGVRGEECATLLR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH
DFFAVRRERADFSPG
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MWRDVPDASFPFPGGSRLRGGGFRAFAPAGPVPAAPPGHTWECLMDRALDRARHAAALGE
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
VPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAGQMLGNYRLGGCVLVVTLEP
CCCCEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
CAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSANHSLWHMGGVRGEECATLLR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH
DFFAVRRERADFSPG
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]