Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is cbiH [H]
Identifier: 220905276
GI number: 220905276
Start: 2427232
End: 2427993
Strand: Reverse
Name: cbiH [H]
Synonym: Ddes_2014
Alternate gene names: 220905276
Gene position: 2427993-2427232 (Counterclockwise)
Preceding gene: 220905277
Following gene: 220905275
Centisome position: 84.5
GC content: 61.68
Gene sequence:
>762_bases ATGACGCAAGCCGCCAGTCTTCATGTTGTCGGCCTTGGCCCCGGCGACGCTCAATGCCTCACGCCGCAGGCCCGCGCAGT GCTGGCCCAGGCCAGTTGTGTGGTGGGCTATCACCTGTACATGGATATGGTTCCCCCCGAATTGCTGGAGGGCAAAGAGC TGATAAGCACCGGCATGCGCCACGAAACAGAGCGCTGCGCGGCCGCTGTGGATGCGGCCCTGGCCGGTCGGCCCACGGCC CTTGTCTGCTCGGGCGACCCCGGTATCTACGCCATGGCGGGCCTTGCCCTGGAAATACTTGAACTGCGAGGCCTGGCCGA TACGGTCCCCTTTGGTGTGGTTCCGGGCGTTCCCGCGGTATGCGCGGCTGCGGCTCTGCTGGGCGCACCCCTGACGCATG ATTTTGCCTGCGTGAGCCTGAGCGATCTGCTGACGCCGTGGGAAACCATTGTTAAAAGGCTTACCGCGGCTCTGGAGGCG GATTTTGTGTGCGTTATCTACAATCCGCGCTCCAGGGGGCGCCCCGGCCATCTGGACCATGCGCTGGAACTGGCCCGCCG TTTTCGCGCGGGGGAATGCCCTGTGGGGCTGGTGCGGCAGGCATACAGGCCTGGACAGAGTGTGAGCGTGCACAGACTGG ATGCCTTTGATGCCGCACAGGTGGATATGCTTTCTTTGCTGATTATCGGCAACAATGAAAGCAGATCTGTTGGGTCGTAT ATGCTTACACCCAGGGGATATGCACGTAAAAGACGTTTATGA
Upstream 100 bases:
>100_bases CCATTTTTCAGTCGCAGTTGACCGTAGCTGTGGCCCTGGCCCTCGAGCAGGAGCCGGACAAGGCCGCAAACGGTGAAAAC AACAAAAAAGAAGAACAGAT
Downstream 100 bases:
>100_bases CAGTGTAAATGACTTGAAAATGTGTTTCGGGCTTCCCATTGACACGTTGCCATGCTGGCCGTAAGCTTGCAAAAATTCTC ATGTGTTGTTTTTTTACCTT
Product: precorrin-3B C17-methyltransferase
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTQAASLHVVGLGPGDAQCLTPQARAVLAQASCVVGYHLYMDMVPPELLEGKELISTGMRHETERCAAAVDAALAGRPTA LVCSGDPGIYAMAGLALEILELRGLADTVPFGVVPGVPAVCAAAALLGAPLTHDFACVSLSDLLTPWETIVKRLTAALEA DFVCVIYNPRSRGRPGHLDHALELARRFRAGECPVGLVRQAYRPGQSVSVHRLDAFDAAQVDMLSLLIIGNNESRSVGSY MLTPRGYARKRRL
Sequences:
>Translated_253_residues MTQAASLHVVGLGPGDAQCLTPQARAVLAQASCVVGYHLYMDMVPPELLEGKELISTGMRHETERCAAAVDAALAGRPTA LVCSGDPGIYAMAGLALEILELRGLADTVPFGVVPGVPAVCAAAALLGAPLTHDFACVSLSDLLTPWETIVKRLTAALEA DFVCVIYNPRSRGRPGHLDHALELARRFRAGECPVGLVRQAYRPGQSVSVHRLDAFDAAQVDMLSLLIIGNNESRSVGSY MLTPRGYARKRRL >Mature_252_residues TQAASLHVVGLGPGDAQCLTPQARAVLAQASCVVGYHLYMDMVPPELLEGKELISTGMRHETERCAAAVDAALAGRPTAL VCSGDPGIYAMAGLALEILELRGLADTVPFGVVPGVPAVCAAAALLGAPLTHDFACVSLSDLLTPWETIVKRLTAALEAD FVCVIYNPRSRGRPGHLDHALELARRFRAGECPVGLVRQAYRPGQSVSVHRLDAFDAAQVDMLSLLIIGNNESRSVGSYM LTPRGYARKRRL
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.131
Molecular weight: Translated: 26883; Mature: 26751
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAASLHVVGLGPGDAQCLTPQARAVLAQASCVVGYHLYMDMVPPELLEGKELISTGMR CCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHH HETERCAAAVDAALAGRPTALVCSGDPGIYAMAGLALEILELRGLADTVPFGVVPGVPAV HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHH CAAAALLGAPLTHDFACVSLSDLLTPWETIVKRLTAALEADFVCVIYNPRSRGRPGHLDH HHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH ALELARRFRAGECPVGLVRQAYRPGQSVSVHRLDAFDAAQVDMLSLLIIGNNESRSVGSY HHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHEEEEEEEECCCCCCCCCCE MLTPRGYARKRRL EECCCCHHHHCCC >Mature Secondary Structure TQAASLHVVGLGPGDAQCLTPQARAVLAQASCVVGYHLYMDMVPPELLEGKELISTGMR CCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHH HETERCAAAVDAALAGRPTALVCSGDPGIYAMAGLALEILELRGLADTVPFGVVPGVPAV HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHH CAAAALLGAPLTHDFACVSLSDLLTPWETIVKRLTAALEADFVCVIYNPRSRGRPGHLDH HHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH ALELARRFRAGECPVGLVRQAYRPGQSVSVHRLDAFDAAQVDMLSLLIIGNNESRSVGSY HHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHEEEEEEEECCCCCCCCCCE MLTPRGYARKRRL EECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]