Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is flgL [C]
Identifier: 220905262
GI number: 220905262
Start: 2411038
End: 2412576
Strand: Reverse
Name: flgL [C]
Synonym: Ddes_2000
Alternate gene names: 220905262
Gene position: 2412576-2411038 (Counterclockwise)
Preceding gene: 220905263
Following gene: 220905261
Centisome position: 83.96
GC content: 57.31
Gene sequence:
>1539_bases ATGTCCATTCGTGTAACACAAAGCTCCATGTACAATACCATGGTGGGGCAGATGCAGAAGAGCCTTTCTGCATATATGGA AAGTAACGAACAAGGCTCGACGCAAAAAAAGATCAACCGCCCGTCCGATGACCCTGCGGGCATGTACCGTGTGCTCATGA CCAGGGATGATATCAGCGCCACCAAGCAGTATCAGTCCAATTGCGATACGGCCAAGGGCTGGCTTGAACTGACGGATAAC GTACTGGGAACCCAGTTGAGCAATGCCATCATCAGCCTCAAGAGCCGCATGGAACAGGCTGCCACCGGCACCACGGCTGA TCAGCGCAAGCTCATTGCCCAGGAAGCGCGTGAAATTTTCGGCCAGATTCTCAACCTGTCCAATACGCAGTTCAACGGCA AGAGCATCTTTGCCGGGCAGCGGTATGACCTGAACGCCTATGAGCAGAGCCTGGCCCTGACCTGTTGGGATGACACGTGG AACAACGAGATCAGCCAGGGGCATTATTCCATTGATGGAGCAAGCAATACCTCCATGATGATCCAGTTCACGGATGACGG CACCCTGGGAACGGACACGCTGACCTACCGCTGGTCCAAGGACGGCGGCGACACCTGGACCACAAGTACCGTACCCGCCG GCAGCCGCACACTGGTGGCCGATGGCGTGACCATCACTATGGATCAGGATATGGCCGTCAGCGCGGCGGATACAAGCCTC GGCCCCGGGGCCAAAAACGGTACGCTCGTCTATATACGGCCTACGGCCGTCTACCAAGGGGATGACAACGATCCGCCGCC GGAAATGACCGTCATGGGCGGTCCCGCCGGGCTGAAAACGTCGGCCAACGGAGCCTTCGGCAATAACGTGCTGGTGCGTA TGGACAATACCGTGGACCTGAACTCCACCGGCACGGCGTTCAACTATTCTTACAGCCTGGATAACGGCGGCACCTGGGTC ACGGCTTCGGGCCAGACCACGGGGGGCGGCACTGTGCGCCTGCCGGTGCCGGGCGGCTACATGGATATGGACGCCACAGC CACCAATCCGCCCACAAGCGTCATTGACGCAGGCACGCAGGTGCTCATCCATCCCTCGCGCGCCAACCTGAACCTGGAAA TAATGCAGGGAACCTACATCTCTGTGAACAACGTGGGCAAGGATATTTTCGGGGGGTACTATCAGGGGCAGCCGTCGCTT GAGGGCGGCCAGAACCTTTTTGACGTGGTGGGCGAATTCATTGCCTACTGTGAAAACAATAATCAGGAAGGCTGCCAGAA AAGCCTGGCCGCCATAGAGCAGGCGCATGCCCACATCCTTGCGTACGAAGCCCGCATCGGCGGGCTGGAAAACCGCGTCA GCATGGCTCAGGACGTGCTCAGCTTTCAAAAGCTGGACCAGGAAGAACGATTGAGCTATACCGAGGACATCGACCTGACA GAGCTGCTGGCAAAGCTTACGCGGCAGCAGCTGACGTACCAGACGGTGCTTCAGTCTTCTTCTATGATCATGCAGATGAG TCTTGCCAAGTACATATAA
Upstream 100 bases:
>100_bases TCCCAGGCGCAATGCCGTCAGGCCTGTCCGTGGCTGTACAGGGGCGCTTTAAATAATCGGACACGTGTTTTTCCGGCGAG AATATGCTCAAGGAGTTGCC
Downstream 100 bases:
>100_bases CAGGTAGCATCTATGCTTATACTGACGCGCCGCCCGGGTGAAAGCCTGTATCTCGGCGAAAACATACGCATAACCGTTCT GGGTATGCAGGGCAAACAGG
Product: flagellar hook-associated protein 3
Products: NA
Alternate protein names: Flagellin-Like Protein; Flagellin; Flagellar Hook-Associated ; Flagellin And Related Hook-Associated Proteins; Second Flagellar Hook-Filament Junction Protein FlgL; Flagellar Hook-Associated Protein
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSIRVTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISATKQYQSNCDTAKGWLELTDN VLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIFGQILNLSNTQFNGKSIFAGQRYDLNAYEQSLALTCWDDTW NNEISQGHYSIDGASNTSMMIQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSL GPGAKNGTLVYIRPTAVYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDLNSTGTAFNYSYSLDNGGTWV TASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQVLIHPSRANLNLEIMQGTYISVNNVGKDIFGGYYQGQPSL EGGQNLFDVVGEFIAYCENNNQEGCQKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLT ELLAKLTRQQLTYQTVLQSSSMIMQMSLAKYI
Sequences:
>Translated_512_residues MSIRVTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISATKQYQSNCDTAKGWLELTDN VLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIFGQILNLSNTQFNGKSIFAGQRYDLNAYEQSLALTCWDDTW NNEISQGHYSIDGASNTSMMIQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSL GPGAKNGTLVYIRPTAVYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDLNSTGTAFNYSYSLDNGGTWV TASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQVLIHPSRANLNLEIMQGTYISVNNVGKDIFGGYYQGQPSL EGGQNLFDVVGEFIAYCENNNQEGCQKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLT ELLAKLTRQQLTYQTVLQSSSMIMQMSLAKYI >Mature_511_residues SIRVTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISATKQYQSNCDTAKGWLELTDNV LGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIFGQILNLSNTQFNGKSIFAGQRYDLNAYEQSLALTCWDDTWN NEISQGHYSIDGASNTSMMIQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSLG PGAKNGTLVYIRPTAVYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDLNSTGTAFNYSYSLDNGGTWVT ASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQVLIHPSRANLNLEIMQGTYISVNNVGKDIFGGYYQGQPSLE GGQNLFDVVGEFIAYCENNNQEGCQKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLTE LLAKLTRQQLTYQTVLQSSSMIMQMSLAKYI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55600; Mature: 55469
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRVTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISA CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHEEEEEECCCHHH TKQYQSNCDTAKGWLELTDNVLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GQILNLSNTQFNGKSIFAGQRYDLNAYEQSLALTCWDDTWNNEISQGHYSIDGASNTSMM HHHHCCCCCCCCCCEEECCCCCCCCHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCEEE IQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSL EEECCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCEEEECCEEEEECCCCEEEECCCCC GPGAKNGTLVYIRPTAVYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDL CCCCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCEEEC NSTGTAFNYSYSLDNGGTWVTASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQ CCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCHHHHCCCCE VLIHPSRANLNLEIMQGTYISVNNVGKDIFGGYYQGQPSLEGGQNLFDVVGEFIAYCENN EEEECCCCCEEEEEECCEEEEECCCCHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCC NQEGCQKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLT CHHHHHHHHHHHHHHHHHEEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHH ELLAKLTRQQLTYQTVLQSSSMIMQMSLAKYI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SIRVTQSSMYNTMVGQMQKSLSAYMESNEQGSTQKKINRPSDDPAGMYRVLMTRDDISA EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHEEEEEECCCHHH TKQYQSNCDTAKGWLELTDNVLGTQLSNAIISLKSRMEQAATGTTADQRKLIAQEAREIF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GQILNLSNTQFNGKSIFAGQRYDLNAYEQSLALTCWDDTWNNEISQGHYSIDGASNTSMM HHHHCCCCCCCCCCEEECCCCCCCCHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCEEE IQFTDDGTLGTDTLTYRWSKDGGDTWTTSTVPAGSRTLVADGVTITMDQDMAVSAADTSL EEECCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCEEEECCEEEEECCCCEEEECCCCC GPGAKNGTLVYIRPTAVYQGDDNDPPPEMTVMGGPAGLKTSANGAFGNNVLVRMDNTVDL CCCCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCEEEC NSTGTAFNYSYSLDNGGTWVTASGQTTGGGTVRLPVPGGYMDMDATATNPPTSVIDAGTQ CCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCHHHHCCCCE VLIHPSRANLNLEIMQGTYISVNNVGKDIFGGYYQGQPSLEGGQNLFDVVGEFIAYCENN EEEECCCCCEEEEEECCEEEEECCCCHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCC NQEGCQKSLAAIEQAHAHILAYEARIGGLENRVSMAQDVLSFQKLDQEERLSYTEDIDLT CHHHHHHHHHHHHHHHHHEEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHH ELLAKLTRQQLTYQTVLQSSSMIMQMSLAKYI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA