| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904903
Identifier: 220904903
GI number: 220904903
Start: 1969956
End: 1970891
Strand: Reverse
Name: 220904903
Synonym: Ddes_1638
Alternate gene names: NA
Gene position: 1970891-1969956 (Counterclockwise)
Preceding gene: 220904904
Following gene: 220904871
Centisome position: 68.59
GC content: 60.58
Gene sequence:
>936_bases ATGATTGCTGCCGCCACGTTCAAAGGATACGGTTCATCCATGCAGACTGTTCTTGACGCCGACACCTGGGATGCCTGCCG GAATATCCGTCAGCGCCAGCGCCGCCTGGGTACTGTATGCGCCCTGCTGCTGGCCGTGGCCTTGTTGGGACTGGTGGACG GTCTGCAAGGCCTGATGCGTTCCGGGACCAATACGCTTGAAATGCTGCCAGGCAATGTTGTGGCGCTTTCCGGTCCTCTT ACAGTCAAAAATCCCGTAACAGGCGACATAGAGGTGCGTTTTACGCCTCCAGATGCGCCGCTGGTTTTCAACCTTGAAGG CTTTTTTGCCGGATACTGGTTTGGCAACGGCATGTGGCGCGGTACTGTTGCCGCAGAAAACGGCGCAGAAGCCGGTGAGT ACCAGATGCGCGTGACCTTCAGGGGCGCGGCGGCGACCACGGCCCAGAACTATGCCGTAGTTGTGCGCGCGGATGCCGCT GCTATGCGCGATCATTCAACCTCTTTTGCCCAGCGCCTTACCGGGTGTAATCCTTTTGTGCTGGCTGCGGCTTTTGTCGG TATGGCCCTGCTGGTGGGCGTGGGGGTATACAGGCAGGGCAGCAGGCTCATACGCAAGCTGGTGCGCCTTGGTTGCGGCG AAGTGGTGCGGGTGCAGGAAGAAAAGGACGGTCTGCGCTTGTGGTGCCTGCTTTTCGGCACACGCCCTCCCTATGAAGGA ACTGTCTGCTCCGTTATCACCACAGATGGGCGCCTTCTGGCACAGGCCCGTGCGGGTACGGCAGCCAAGGGAGCCCTGCA GCTGTTTATCCGGCGCAACCAGATGCAGGACGCGTCCGGAACCTGCCATGAACAAACATCTTTCGCCGTGCGGCCCGGCT GCCTTGTCTGCCTGCGTCCTCCGTGTACGCAGTCTCCTCCGGCCCCCACAAGCTGA
Upstream 100 bases:
>100_bases AGCATCGCTGCATGTTTGCCGGTAAAGCGCCGGGGTGAACAGTTATAAGTATTTTGAGGACACATGCGCTCAAAGCCAAA TGCTCTAACAGGGGTATGTC
Downstream 100 bases:
>100_bases GCCAACCGGCGTTGCGCGGCATGCACATACGCGCCATATGTGCATGCCGCATTTCAAATGCACTAAGCGTTTTTTCTTCA GGCCTCATGAACTGGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MIAAATFKGYGSSMQTVLDADTWDACRNIRQRQRRLGTVCALLLAVALLGLVDGLQGLMRSGTNTLEMLPGNVVALSGPL TVKNPVTGDIEVRFTPPDAPLVFNLEGFFAGYWFGNGMWRGTVAAENGAEAGEYQMRVTFRGAAATTAQNYAVVVRADAA AMRDHSTSFAQRLTGCNPFVLAAAFVGMALLVGVGVYRQGSRLIRKLVRLGCGEVVRVQEEKDGLRLWCLLFGTRPPYEG TVCSVITTDGRLLAQARAGTAAKGALQLFIRRNQMQDASGTCHEQTSFAVRPGCLVCLRPPCTQSPPAPTS
Sequences:
>Translated_311_residues MIAAATFKGYGSSMQTVLDADTWDACRNIRQRQRRLGTVCALLLAVALLGLVDGLQGLMRSGTNTLEMLPGNVVALSGPL TVKNPVTGDIEVRFTPPDAPLVFNLEGFFAGYWFGNGMWRGTVAAENGAEAGEYQMRVTFRGAAATTAQNYAVVVRADAA AMRDHSTSFAQRLTGCNPFVLAAAFVGMALLVGVGVYRQGSRLIRKLVRLGCGEVVRVQEEKDGLRLWCLLFGTRPPYEG TVCSVITTDGRLLAQARAGTAAKGALQLFIRRNQMQDASGTCHEQTSFAVRPGCLVCLRPPCTQSPPAPTS >Mature_311_residues MIAAATFKGYGSSMQTVLDADTWDACRNIRQRQRRLGTVCALLLAVALLGLVDGLQGLMRSGTNTLEMLPGNVVALSGPL TVKNPVTGDIEVRFTPPDAPLVFNLEGFFAGYWFGNGMWRGTVAAENGAEAGEYQMRVTFRGAAATTAQNYAVVVRADAA AMRDHSTSFAQRLTGCNPFVLAAAFVGMALLVGVGVYRQGSRLIRKLVRLGCGEVVRVQEEKDGLRLWCLLFGTRPPYEG TVCSVITTDGRLLAQARAGTAAKGALQLFIRRNQMQDASGTCHEQTSFAVRPGCLVCLRPPCTQSPPAPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33294; Mature: 33294
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAAATFKGYGSSMQTVLDADTWDACRNIRQRQRRLGTVCALLLAVALLGLVDGLQGLMR CCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTNTLEMLPGNVVALSGPLTVKNPVTGDIEVRFTPPDAPLVFNLEGFFAGYWFGNGMWR CCCCEEEECCCCEEEEECCEEECCCCCCCEEEEECCCCCCEEEEECCEEEEEEECCCEEE GTVAAENGAEAGEYQMRVTFRGAAATTAQNYAVVVRADAAAMRDHSTSFAQRLTGCNPFV EEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECHHHHHHCHHHHHHHHCCCCHHH LAAAFVGMALLVGVGVYRQGSRLIRKLVRLGCGEVVRVQEEKDGLRLWCLLFGTRPPYEG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCC TVCSVITTDGRLLAQARAGTAAKGALQLFIRRNQMQDASGTCHEQTSFAVRPGCLVCLRP CEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEECC PCTQSPPAPTS CCCCCCCCCCC >Mature Secondary Structure MIAAATFKGYGSSMQTVLDADTWDACRNIRQRQRRLGTVCALLLAVALLGLVDGLQGLMR CCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTNTLEMLPGNVVALSGPLTVKNPVTGDIEVRFTPPDAPLVFNLEGFFAGYWFGNGMWR CCCCEEEECCCCEEEEECCEEECCCCCCCEEEEECCCCCCEEEEECCEEEEEEECCCEEE GTVAAENGAEAGEYQMRVTFRGAAATTAQNYAVVVRADAAAMRDHSTSFAQRLTGCNPFV EEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECHHHHHHCHHHHHHHHCCCCHHH LAAAFVGMALLVGVGVYRQGSRLIRKLVRLGCGEVVRVQEEKDGLRLWCLLFGTRPPYEG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCC TVCSVITTDGRLLAQARAGTAAKGALQLFIRRNQMQDASGTCHEQTSFAVRPGCLVCLRP CEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEECC PCTQSPPAPTS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA