| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is glnA [H]
Identifier: 220904859
GI number: 220904859
Start: 1915042
End: 1917234
Strand: Reverse
Name: glnA [H]
Synonym: Ddes_1593
Alternate gene names: 220904859
Gene position: 1917234-1915042 (Counterclockwise)
Preceding gene: 220904860
Following gene: 220904858
Centisome position: 66.72
GC content: 58.5
Gene sequence:
>2193_bases ATGAGCAGCAAAACCGCCAGACACAGCGCCATCCAGGCCATCACCACCTACAAACCCGAAGCGGCTCCTCTCAATTTCGC CGATACACGGCCCACGGACATCTTCGGTTGCAACGTGTTCAATGATCGCGTCATGCGGGAGCGCCTGCCCAAGGCCGTGT ACCGCTCGCTGCGCAAAACCATTGAATTCGGCCAGCGTATGGACCCGTCCATAGCCGATACCGTGGCGGCGGTCATGAAA GACTGGGCCATTGAAAAAGGGGCAACTCACTTTACCCACATTTTCTATCCGCTTACCGGGCAAACGGCTGAAAAGCATGA TAGCTTTCTCATGCCTGACGGCGCAGGCGGGGTGATTGCGGAATTTTCAGGCTCCATGCTCATCCGGGGCGAACCGGACG CTTCGTCCTTTCCTTCCGGCGGCCTGCGCTCCACGTTCGAGGCGCGCGGCTACACTGCCTGGGATGTCACAAGCCCCGCG TATATCATGGAAAATCCCAACGGAACCTTTTTGTGCATCCCCACTATGTTCCTTTCATGGACCGGTGTGGCCCTGGACAA GAAAACTCCACTGCTGCGTTCAAGTCAGGCCCTCAATCGCGAAGCCAAGAGGGTGCTGAGCCTTTTCGGTATTGAGACGG AACTGCCCGTAGTGGCCTATGCCGGGCTTGAGCAGGAGTATTTTTCCATTGATCACAATTTTAACTTTGCCCGTCCCGAT ATCCAGATCGCCGGACGCACTCTTTTTGGCGCACGCCCGGCCAAAGGGCAGGAATTCAGCGACCAGTATTTCGGCGTGAT CCCCCAGCGCGTACTTTCCTATATGATGGAAGTGGAGCGCGAGCTTTACAAGCTGGGGGTGCCAGTGCGTTGCCGCCACA ACGAGGCCGCCCCGAGCCAGTATGAAATCGCGCCTCTTTATGAGGTCAGCAATGTGGCCGTGGACCATAACCATATTATT ATGTCCACCCTGCGTAACGTGGCCAAGCGTTACGGCCTCAAATGCCTACTGCACGAAAAGCCCTTTGCCGGAGTGAACGG GTCAGGCAAGCACGTGAACTATTCCATCGGCAATGCCGATCTGGGTTCTCTTTTTGAACCGGGCGAAACGCCGTATGCCA ACGCCAAGTTTCTGGTGTTCTGCGCGGCCATGATCCGCAGCGTGCACAAGTTCGGCGGTCTTTTGCGCGCCACCGTAGCC AGCGCCAGCAATGATCACCGCCTGGGCGCCAATGAGGCTCCCCCGGCCATCATGTCCATCTTCCTTGGCGACATGCTTAC CGAGGTTTTCGAGGCCTTCCGCGCCGGGCGGGTTGACGATGCCGTCAATGGCAAAAAGCGCGGCGCGCTCAATCTCGGCG TGGATACCCTGCCGCCCCTGCCGGCTGACCCGGGCGACCGCAACCGTACAAGCCCTGTGGCCTTTACGGGCAACCGCTTT GAATTCCGCGCGCTCGGCTCCAGCCAGTCTGCCGCTGGCTCCATCACGGCGCTCAACGTCATGATGGCCGACTCGCTGGG ATTTGCCGCCGACTGGCTGGAAAAGGAACTGGCGCAGGGGCGCGATTTCAGAACCGCTCTGGAATCGTTTATCAGCCATG TCATTGAAGAGCACAGCGCCGTTATCTTTAACGGCGACGGCTATTCTGAAATCTGGCACAAGGAAGCCGTGCGGCGCGGC CTGCCCAACCTGCGCACCACGCCCGAAGCGCTGCCCGAGCTTACTCGCCCTGAAGTGGTTGAGATCTACGAAAAGGCCGA GGTGCTTAACCGGGCAGAACTCAAGGCCCGGCAGGACATCTATCTGGAGCAGTATTGCAAGACCGTGCGTACCGAGGCCA ACCTGACCATACGCATAGCCCGTACCGTCATTTTTCCCGCAGCCATGCGCTATCAGGGCGAACTGGCGTCTACGGCGGCC AGCATGCAGGCTATCGGCATGGAGCCGAAAATCTTCACCCTTGAAGAAGTGACCGGGCAATTGCGGCAAATGCAGGCCGC CACTATGACCCTTGAAAGCGTTTTGACCGAGGTGGACGCGCAGGGCCTGGGCATGGAAGCCGCCCGCCGTTACTGCAACG AGGTGCTGCCGTGCATGAACGAAGTACGCCGCCATGCCGATATGCTCGAAACGCGCGTTGCCGATGATCTGTGGGCTTTG CCCAATTATCAGGAAATACTGTTCGGCAAATAG
Upstream 100 bases:
>100_bases TTCCGGCATGTGGCGGCACGGGCCGCCCGGACGCCGCCGGCAGCAAGCGTTTTCCAACGAATTTTGGTGCGTCACCCCTT TTTCTGACGCGAGGTTTGTA
Downstream 100 bases:
>100_bases GGTTTGTGGCGGCATGCCCGCTCAGGTAAACAACAGCGGCCCTGGCCCTGTTCACGCCAATGCCCTGTGGCATGCGCGCT GTGTGAAAAGGGCCGGGGCC
Product: glutamine synthetase catalytic subunit
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSSKTARHSAIQAITTYKPEAAPLNFADTRPTDIFGCNVFNDRVMRERLPKAVYRSLRKTIEFGQRMDPSIADTVAAVMK DWAIEKGATHFTHIFYPLTGQTAEKHDSFLMPDGAGGVIAEFSGSMLIRGEPDASSFPSGGLRSTFEARGYTAWDVTSPA YIMENPNGTFLCIPTMFLSWTGVALDKKTPLLRSSQALNREAKRVLSLFGIETELPVVAYAGLEQEYFSIDHNFNFARPD IQIAGRTLFGARPAKGQEFSDQYFGVIPQRVLSYMMEVERELYKLGVPVRCRHNEAAPSQYEIAPLYEVSNVAVDHNHII MSTLRNVAKRYGLKCLLHEKPFAGVNGSGKHVNYSIGNADLGSLFEPGETPYANAKFLVFCAAMIRSVHKFGGLLRATVA SASNDHRLGANEAPPAIMSIFLGDMLTEVFEAFRAGRVDDAVNGKKRGALNLGVDTLPPLPADPGDRNRTSPVAFTGNRF EFRALGSSQSAAGSITALNVMMADSLGFAADWLEKELAQGRDFRTALESFISHVIEEHSAVIFNGDGYSEIWHKEAVRRG LPNLRTTPEALPELTRPEVVEIYEKAEVLNRAELKARQDIYLEQYCKTVRTEANLTIRIARTVIFPAAMRYQGELASTAA SMQAIGMEPKIFTLEEVTGQLRQMQAATMTLESVLTEVDAQGLGMEAARRYCNEVLPCMNEVRRHADMLETRVADDLWAL PNYQEILFGK
Sequences:
>Translated_730_residues MSSKTARHSAIQAITTYKPEAAPLNFADTRPTDIFGCNVFNDRVMRERLPKAVYRSLRKTIEFGQRMDPSIADTVAAVMK DWAIEKGATHFTHIFYPLTGQTAEKHDSFLMPDGAGGVIAEFSGSMLIRGEPDASSFPSGGLRSTFEARGYTAWDVTSPA YIMENPNGTFLCIPTMFLSWTGVALDKKTPLLRSSQALNREAKRVLSLFGIETELPVVAYAGLEQEYFSIDHNFNFARPD IQIAGRTLFGARPAKGQEFSDQYFGVIPQRVLSYMMEVERELYKLGVPVRCRHNEAAPSQYEIAPLYEVSNVAVDHNHII MSTLRNVAKRYGLKCLLHEKPFAGVNGSGKHVNYSIGNADLGSLFEPGETPYANAKFLVFCAAMIRSVHKFGGLLRATVA SASNDHRLGANEAPPAIMSIFLGDMLTEVFEAFRAGRVDDAVNGKKRGALNLGVDTLPPLPADPGDRNRTSPVAFTGNRF EFRALGSSQSAAGSITALNVMMADSLGFAADWLEKELAQGRDFRTALESFISHVIEEHSAVIFNGDGYSEIWHKEAVRRG LPNLRTTPEALPELTRPEVVEIYEKAEVLNRAELKARQDIYLEQYCKTVRTEANLTIRIARTVIFPAAMRYQGELASTAA SMQAIGMEPKIFTLEEVTGQLRQMQAATMTLESVLTEVDAQGLGMEAARRYCNEVLPCMNEVRRHADMLETRVADDLWAL PNYQEILFGK >Mature_729_residues SSKTARHSAIQAITTYKPEAAPLNFADTRPTDIFGCNVFNDRVMRERLPKAVYRSLRKTIEFGQRMDPSIADTVAAVMKD WAIEKGATHFTHIFYPLTGQTAEKHDSFLMPDGAGGVIAEFSGSMLIRGEPDASSFPSGGLRSTFEARGYTAWDVTSPAY IMENPNGTFLCIPTMFLSWTGVALDKKTPLLRSSQALNREAKRVLSLFGIETELPVVAYAGLEQEYFSIDHNFNFARPDI QIAGRTLFGARPAKGQEFSDQYFGVIPQRVLSYMMEVERELYKLGVPVRCRHNEAAPSQYEIAPLYEVSNVAVDHNHIIM STLRNVAKRYGLKCLLHEKPFAGVNGSGKHVNYSIGNADLGSLFEPGETPYANAKFLVFCAAMIRSVHKFGGLLRATVAS ASNDHRLGANEAPPAIMSIFLGDMLTEVFEAFRAGRVDDAVNGKKRGALNLGVDTLPPLPADPGDRNRTSPVAFTGNRFE FRALGSSQSAAGSITALNVMMADSLGFAADWLEKELAQGRDFRTALESFISHVIEEHSAVIFNGDGYSEIWHKEAVRRGL PNLRTTPEALPELTRPEVVEIYEKAEVLNRAELKARQDIYLEQYCKTVRTEANLTIRIARTVIFPAAMRYQGELASTAAS MQAIGMEPKIFTLEEVTGQLRQMQAATMTLESVLTEVDAQGLGMEAARRYCNEVLPCMNEVRRHADMLETRVADDLWALP NYQEILFGK
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 80848; Mature: 80717
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKTARHSAIQAITTYKPEAAPLNFADTRPTDIFGCNVFNDRVMRERLPKAVYRSLRKT CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH IEFGQRMDPSIADTVAAVMKDWAIEKGATHFTHIFYPLTGQTAEKHDSFLMPDGAGGVIA HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCEECCCCCCCCCE EFSGSMLIRGEPDASSFPSGGLRSTFEARGYTAWDVTSPAYIMENPNGTFLCIPTMFLSW ECCCCEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEECCCCCEEEHHHHHHHH TGVALDKKTPLLRSSQALNREAKRVLSLFGIETELPVVAYAGLEQEYFSIDHNFNFARPD CCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHEEECCCCCCCCCC IQIAGRTLFGARPAKGQEFSDQYFGVIPQRVLSYMMEVERELYKLGVPVRCRHNEAAPSQ CEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC YEIAPLYEVSNVAVDHNHIIMSTLRNVAKRYGLKCLLHEKPFAGVNGSGKHVNYSIGNAD EEEEEEEECCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCC LGSLFEPGETPYANAKFLVFCAAMIRSVHKFGGLLRATVASASNDHRLGANEAPPAIMSI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FLGDMLTEVFEAFRAGRVDDAVNGKKRGALNLGVDTLPPLPADPGDRNRTSPVAFTGNRF HHHHHHHHHHHHHHCCCCCHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCE EFRALGSSQSAAGSITALNVMMADSLGFAADWLEKELAQGRDFRTALESFISHVIEEHSA EEEECCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCE VIFNGDGYSEIWHKEAVRRGLPNLRTTPEALPELTRPEVVEIYEKAEVLNRAELKARQDI EEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLEQYCKTVRTEANLTIRIARTVIFPAAMRYQGELASTAASMQAIGMEPKIFTLEEVTGQ HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHHH LRQMQAATMTLESVLTEVDAQGLGMEAARRYCNEVLPCMNEVRRHADMLETRVADDLWAL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNYQEILFGK CCHHHHHCCC >Mature Secondary Structure SSKTARHSAIQAITTYKPEAAPLNFADTRPTDIFGCNVFNDRVMRERLPKAVYRSLRKT CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH IEFGQRMDPSIADTVAAVMKDWAIEKGATHFTHIFYPLTGQTAEKHDSFLMPDGAGGVIA HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCEECCCCCCCCCE EFSGSMLIRGEPDASSFPSGGLRSTFEARGYTAWDVTSPAYIMENPNGTFLCIPTMFLSW ECCCCEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCEEEEECCCCCEEEHHHHHHHH TGVALDKKTPLLRSSQALNREAKRVLSLFGIETELPVVAYAGLEQEYFSIDHNFNFARPD CCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHEEECCCCCCCCCC IQIAGRTLFGARPAKGQEFSDQYFGVIPQRVLSYMMEVERELYKLGVPVRCRHNEAAPSQ CEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC YEIAPLYEVSNVAVDHNHIIMSTLRNVAKRYGLKCLLHEKPFAGVNGSGKHVNYSIGNAD EEEEEEEECCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCC LGSLFEPGETPYANAKFLVFCAAMIRSVHKFGGLLRATVASASNDHRLGANEAPPAIMSI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FLGDMLTEVFEAFRAGRVDDAVNGKKRGALNLGVDTLPPLPADPGDRNRTSPVAFTGNRF HHHHHHHHHHHHHHCCCCCHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCE EFRALGSSQSAAGSITALNVMMADSLGFAADWLEKELAQGRDFRTALESFISHVIEEHSA EEEECCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCE VIFNGDGYSEIWHKEAVRRGLPNLRTTPEALPELTRPEVVEIYEKAEVLNRAELKARQDI EEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLEQYCKTVRTEANLTIRIARTVIFPAAMRYQGELASTAASMQAIGMEPKIFTLEEVTGQ HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHHH LRQMQAATMTLESVLTEVDAQGLGMEAARRYCNEVLPCMNEVRRHADMLETRVADDLWAL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNYQEILFGK CCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]