| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is trpE [H]
Identifier: 220904858
GI number: 220904858
Start: 1913162
End: 1914616
Strand: Reverse
Name: trpE [H]
Synonym: Ddes_1592
Alternate gene names: 220904858
Gene position: 1914616-1913162 (Counterclockwise)
Preceding gene: 220904859
Following gene: 220904857
Centisome position: 66.63
GC content: 60.82
Gene sequence:
>1455_bases ATGAAAGAGAACGGTGACAGGTTGCATTTGCTCACGTTGCGACAGTCCGCCCGGTGGCTGCCGGCGGACATGGATACCCC CATCAGCCTGTTTATGGGCATGGTGGGCGCCGGTAACGGCATTTTGCTGGAAAGCGCCGAGGTGGACGGCCGCTGGGGGC GCTACAGTATTCTTGCCTGCGATCCGGCTCTTTTCATCGCCTGCCGCGAAGGCAGGCTGGCCCTGGGTGTGAAAGACCAG AGGCTTGCCGCGCTTATGGTTTTTGAAGGCCGCCCTTTTGTGGAGGGCCTGCGTGCGCTCATGGCAGCCCTGGAGGTGCA GCCGCCTGAAAATGCCGCAAATCTGCCGCCCATTACCCGCGCCCTGTACGGGTATCTGGGGTTTGGCATGGCGGGGCTGT TCAATCCGGTGCTGGCATCCACCATGCCGGAAAACGAAGCAGACTGCCTGCTCATCCTGCCTGCCACCGTGCTGGTTTTC GATCACCTGTACAACCGGCTGTGCCAGGTGAGTCTTGGCGACCACCGGCCCCTGAACAGCGGCCGCCAGCCCTTGGAGGT GAACGCGGCCAGGGCTTCCGGTCCGGCTATTGATCCCGGTATGGTGCGGTCCGAACCTGATGAAGAGGGGTACAAGAGCT TTGTGCGCCGCATCAAGGAAATGCTGCGTCAGGGCGAGGCCATACAAGTCGTGCCCTCGGTGCGTTTTTCCACGCCGTTT ATGGGCAATCCTTTTGAACTGTACCGGCGTATGCGGCGCTTTAACGCGTCTCCCTACATGTTTTACATGCGCTTTCCGGA GCTGACGCTCTTCGGCTCTTCGCCTGAAGTGATGGTGCGCTGCACCGCGGGCTGCCTGCAGCTCTCGCCCATCGCGGGTA CACGCAAGCGCGGGGCCGATGATCTGGAGGACGCACGTCTGGCGGCCGAACTGCGGGACGACCCCAAGGAACGCGCCGAG CATGTCATGCTGGTAGATCTTGGCCGCAACGATCTTGGCCGCGTGGCACGGCCCGGCACGGTAACGCTTGAACGCTATAT GGAAGTGGAGCGTTACTCCCACGTCATGCATCTTACAAGCCGGGTTACAGCCCGTCTGGATGTGGGGCTGGACGCCCTGG ATGTGCTGGCCGCCACTTTTCCGGCGGGCACGGTATCGGGCGCGCCCAAAATACGGGCCATGCAGATCATCCGCGAGCTT GAGGGGCGCAGCCGCGGTCCCTACGCGGGATGCATCGGCTGGCTCGGACTGGACAGGGACAGTGTGAACCTGGATATGGG CATTACCATTCGCAGCATGTGGCTGCGTGACAACAGGCTCTTCTGGCAGGCGGGCGGAGGAATCGTTCATGATTCGGACC CGGATATGGAATGGAAAGAAGTTTGCAATAAGTCAGCCATTATGCGCCTTGCCCTGCGAACGGAGGACGAAGAGTATGTT TCTTCTTATAGATAA
Upstream 100 bases:
>100_bases GGGCTAAATAGTTCCGGTACGTAGGTATAGCTGTATGCAGGCGCCGTCTCCCTTGGGAGGCGGCGCTTTTTTTTTGTTCT ACAACTCGAGGATACGGCAG
Downstream 100 bases:
>100_bases TTACGATTCTTTTACATATAATCTGGTACAGGCCTTTCACGCCCTGGGGCACAAGCCTGTAGTTATGACCAACGACGACC CCGCAGTGCTTGGCATGGCT
Product: Anthranilate synthase
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MKENGDRLHLLTLRQSARWLPADMDTPISLFMGMVGAGNGILLESAEVDGRWGRYSILACDPALFIACREGRLALGVKDQ RLAALMVFEGRPFVEGLRALMAALEVQPPENAANLPPITRALYGYLGFGMAGLFNPVLASTMPENEADCLLILPATVLVF DHLYNRLCQVSLGDHRPLNSGRQPLEVNAARASGPAIDPGMVRSEPDEEGYKSFVRRIKEMLRQGEAIQVVPSVRFSTPF MGNPFELYRRMRRFNASPYMFYMRFPELTLFGSSPEVMVRCTAGCLQLSPIAGTRKRGADDLEDARLAAELRDDPKERAE HVMLVDLGRNDLGRVARPGTVTLERYMEVERYSHVMHLTSRVTARLDVGLDALDVLAATFPAGTVSGAPKIRAMQIIREL EGRSRGPYAGCIGWLGLDRDSVNLDMGITIRSMWLRDNRLFWQAGGGIVHDSDPDMEWKEVCNKSAIMRLALRTEDEEYV SSYR
Sequences:
>Translated_484_residues MKENGDRLHLLTLRQSARWLPADMDTPISLFMGMVGAGNGILLESAEVDGRWGRYSILACDPALFIACREGRLALGVKDQ RLAALMVFEGRPFVEGLRALMAALEVQPPENAANLPPITRALYGYLGFGMAGLFNPVLASTMPENEADCLLILPATVLVF DHLYNRLCQVSLGDHRPLNSGRQPLEVNAARASGPAIDPGMVRSEPDEEGYKSFVRRIKEMLRQGEAIQVVPSVRFSTPF MGNPFELYRRMRRFNASPYMFYMRFPELTLFGSSPEVMVRCTAGCLQLSPIAGTRKRGADDLEDARLAAELRDDPKERAE HVMLVDLGRNDLGRVARPGTVTLERYMEVERYSHVMHLTSRVTARLDVGLDALDVLAATFPAGTVSGAPKIRAMQIIREL EGRSRGPYAGCIGWLGLDRDSVNLDMGITIRSMWLRDNRLFWQAGGGIVHDSDPDMEWKEVCNKSAIMRLALRTEDEEYV SSYR >Mature_484_residues MKENGDRLHLLTLRQSARWLPADMDTPISLFMGMVGAGNGILLESAEVDGRWGRYSILACDPALFIACREGRLALGVKDQ RLAALMVFEGRPFVEGLRALMAALEVQPPENAANLPPITRALYGYLGFGMAGLFNPVLASTMPENEADCLLILPATVLVF DHLYNRLCQVSLGDHRPLNSGRQPLEVNAARASGPAIDPGMVRSEPDEEGYKSFVRRIKEMLRQGEAIQVVPSVRFSTPF MGNPFELYRRMRRFNASPYMFYMRFPELTLFGSSPEVMVRCTAGCLQLSPIAGTRKRGADDLEDARLAAELRDDPKERAE HVMLVDLGRNDLGRVARPGTVTLERYMEVERYSHVMHLTSRVTARLDVGLDALDVLAATFPAGTVSGAPKIRAMQIIREL EGRSRGPYAGCIGWLGLDRDSVNLDMGITIRSMWLRDNRLFWQAGGGIVHDSDPDMEWKEVCNKSAIMRLALRTEDEEYV SSYR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=532, Percent_Identity=33.6466165413534, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1788114, Length=435, Percent_Identity=31.264367816092, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI87082077, Length=276, Percent_Identity=30.4347826086957, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1786809, Length=266, Percent_Identity=25.5639097744361, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=478, Percent_Identity=33.2635983263598, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6324361, Length=399, Percent_Identity=25.8145363408521, Blast_Score=106, Evalue=8e-24,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 53956; Mature: 53956
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENGDRLHLLTLRQSARWLPADMDTPISLFMGMVGAGNGILLESAEVDGRWGRYSILAC CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE DPALFIACREGRLALGVKDQRLAALMVFEGRPFVEGLRALMAALEVQPPENAANLPPITR CCEEEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALYGYLGFGMAGLFNPVLASTMPENEADCLLILPATVLVFDHLYNRLCQVSLGDHRPLNS HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRQPLEVNAARASGPAIDPGMVRSEPDEEGYKSFVRRIKEMLRQGEAIQVVPSVRFSTPF CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCC MGNPFELYRRMRRFNASPYMFYMRFPELTLFGSSPEVMVRCTAGCLQLSPIAGTRKRGAD CCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEECCCEEECCCCCCCCCCCC DLEDARLAAELRDDPKERAEHVMLVDLGRNDLGRVARPGTVTLERYMEVERYSHVMHLTS CHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RVTARLDVGLDALDVLAATFPAGTVSGAPKIRAMQIIRELEGRSRGPYAGCIGWLGLDRD HHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEECCCCC SVNLDMGITIRSMWLRDNRLFWQAGGGIVHDSDPDMEWKEVCNKSAIMRLALRTEDEEYV CCEEEECEEEEEEEEECCEEEEEECCCEEECCCCCCHHHHHCCHHHHHHHHHCCCCHHHH SSYR HCCC >Mature Secondary Structure MKENGDRLHLLTLRQSARWLPADMDTPISLFMGMVGAGNGILLESAEVDGRWGRYSILAC CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE DPALFIACREGRLALGVKDQRLAALMVFEGRPFVEGLRALMAALEVQPPENAANLPPITR CCEEEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALYGYLGFGMAGLFNPVLASTMPENEADCLLILPATVLVFDHLYNRLCQVSLGDHRPLNS HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC GRQPLEVNAARASGPAIDPGMVRSEPDEEGYKSFVRRIKEMLRQGEAIQVVPSVRFSTPF CCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCC MGNPFELYRRMRRFNASPYMFYMRFPELTLFGSSPEVMVRCTAGCLQLSPIAGTRKRGAD CCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEECCCEEECCCCCCCCCCCC DLEDARLAAELRDDPKERAEHVMLVDLGRNDLGRVARPGTVTLERYMEVERYSHVMHLTS CHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RVTARLDVGLDALDVLAATFPAGTVSGAPKIRAMQIIRELEGRSRGPYAGCIGWLGLDRD HHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHEEECCCCC SVNLDMGITIRSMWLRDNRLFWQAGGGIVHDSDPDMEWKEVCNKSAIMRLALRTEDEEYV CCEEEECEEEEEEEEECCEEEEEECCCEEECCCCCCHHHHHCCHHHHHHHHHCCCCHHHH SSYR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]