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The map label for this gene is dcrA [H]

Identifier: 220904846

GI number: 220904846

Start: 1900318

End: 1902378

Strand: Reverse

Name: dcrA [H]

Synonym: Ddes_1580

Alternate gene names: 220904846

Gene position: 1902378-1900318 (Counterclockwise)

Preceding gene: 220904848

Following gene: 220904845

Centisome position: 66.21

GC content: 57.35

Gene sequence:

>2061_bases
ATGAAATTGCGCTTGTTGCCCAAAATGCTGCTGCTGATCTTGCTGCCGACGCTTCTGGGCCTTTGCACCGTAACCTGGTT
CAGCTACACGCGCGGGGAGAGGGCGCTGGCCGTACAGATAGACGATGAACTTGCCGCGGTGACACGCAGCCAGGCCGGGC
AGCTTGGCAGTGTGGCCGGGTTGCTGCATAAAGTGCTGGATAATGCCGGGCATACATCCCGCATCAGCAATTTCCTCAAA
GCCGGATCCGAATGGGAAAAAGATGCCCTGCGCCCTGCCATGCAGGCAAGCCTGAAAAGCATTGCCGAAGATTTTCCCTT
GCTGGCTGCAGTGGGTCTGCTTTCACCCGAGGGGGTGGTCGTGGGGCACAGCAATCCTGCTGGAATTAATACCAATCTTT
CTGAACGTCCGTATTTCAAGGCGGCCATGCAGGGTAAAAGCAGCGTGCTGAATGCGCGCAGCAAGGTTTCAGGCGCGGTC
ACCACAGTGATGGCTGCGCCGGTCATGAATGACGGCAAGGTTCTGGGAGTGGTCTACGGCACGGTCGACCTCACTATGTT
CAGCGCTGAAACAGTGGATGCCGTCAGGCTGGGGCAGACCGGCACAAGTTTTGTCTATGACGGCAGCGGTCTGTTACTGA
TGCATCCCAACAAGGACTATGTTGGCGACGAAGACGGCAACCTGGACTGGGTCCGGCAGATACTTGAAAAGCGTAATGGC
AATCTGTCCTACACTTGGGATGGAAAAGAAAAACTGGCGTATTTTCAGGAAATTCCTGACATGGATTGGCTTGTCGTGCT
GAGTATGGAGCGTAGCGAGGTTCTTGCGCCCGCCGCTGTGCTGTTGCGCGGCAATCTGATGCTCATGCTAGCTATTGTCC
TGGTGGTGGGGCTGATAGTTTTTACTGTGGCGCGAAGCATCACCACGGCTCTGAAAAATGAAGAGGCCTTTGTGGGGCGT
GTTGCCGAGGGGCAATTTGAGATGAGCGACCAGCAACGGGCTGTTCATGAAAAATGCGTTGCCCGTACTGACGAAATCGG
GGGGCTGTCCAGGGGCGTGGGCATCATGACGGAGAATCTGCAAAAATTTCTTTCAGAAAGCGAACAACGGGCGCAGGAAG
CCCAAAAGGCCACTGAAGAGGCGCGCCAGGCCATGCACGAGGCCGAAGAAGCCCGCAGAGCCGCCGAAGGAGCCCGGCGT
GACGGCATGCTGGCTGCCGCGGAGCAGCTGGAAGAAGTGGCTTCTGTGCTTTCTTCAGCTTCTACGGAGCTTTCGGCCCA
GATTGAGCAGTCTGACCGCGGCGCGGCAGAATCTGCCCAGCGTTTGTCCGAGGCGGCTACTGCCATGAACGAAATGAACG
CCACCGTGCAGGAGGTTGCCCGTAACGCCGGGGCGGCTTCCATTGCTTCTGCCGAAACCAGAGAAAAAGCTCAGCACGGC
TCCAGTATTGTTGCGCAGTCATTGCAGAGCATTGAAGGCGTGCGGCATATTTCCGGACAGCTCAAGGAAGATATGACGCA
ACTTAACGAACACACCCGCGATATCACACGTATTATGGGCGTCATTTCGGATATTGCTGACCAGACCAACCTGCTGGCCC
TGAATGCCGCCATTGAAGCCGCCCGCGCGGGCGAAGCCGGGCGCGGCTTTGCTGTGGTGGCTGACGAGGTGCGCAAGCTG
GCGGAAAAGACAATGGCTTCCACCCTGGACGTGAGCAGCGTCATCAAGGCCATTCAGGACAGCACGCAAAAAAGCACAGC
CAGTGCGGAAAACGCTGTGGAGCAGATCAATCGGACGACGGAACTGGCCGATATGTCCGGCCAGGCCCTTCAGGAAATCG
TGGCTACTGTGGACGCCACAGCGGATCAGGTGCATGCCATTGCCACAGCCAGCGAGGAGCAGTCCGCCGCCAGCGAGGAA
ATCAACCTGTCCATAGTTCAGGTCAACGACATGGCACGGCAGACCGCCGATGCTATGGGCGAAGCTGCCAGAGCCGTGTC
TGACCTGGCAGCCCAGGCCCAGAACCTCAATACGCTGATTCAGAATATGAAACGGGCGTAA

Upstream 100 bases:

>100_bases
GCATTGCTGTACAGCTTTTCAGAACAGCCTCTCTGACTTTTTCCATACCTGGTATGCAGAAAATCAGACAGGAGTTTTTT
AAGGAAAAGAGAGGAATAGT

Downstream 100 bases:

>100_bases
CGCCTGAAAGTGCGTTGTGCAGATGGAGGCAGCCCTTCCATCTGCACAACGTGCGGGTGCTGGGCGCCCGCGTATCTCAT
GTCTTCCCTTCCTCCTGCCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKLRLLPKMLLLILLPTLLGLCTVTWFSYTRGERALAVQIDDELAAVTRSQAGQLGSVAGLLHKVLDNAGHTSRISNFLK
AGSEWEKDALRPAMQASLKSIAEDFPLLAAVGLLSPEGVVVGHSNPAGINTNLSERPYFKAAMQGKSSVLNARSKVSGAV
TTVMAAPVMNDGKVLGVVYGTVDLTMFSAETVDAVRLGQTGTSFVYDGSGLLLMHPNKDYVGDEDGNLDWVRQILEKRNG
NLSYTWDGKEKLAYFQEIPDMDWLVVLSMERSEVLAPAAVLLRGNLMLMLAIVLVVGLIVFTVARSITTALKNEEAFVGR
VAEGQFEMSDQQRAVHEKCVARTDEIGGLSRGVGIMTENLQKFLSESEQRAQEAQKATEEARQAMHEAEEARRAAEGARR
DGMLAAAEQLEEVASVLSSASTELSAQIEQSDRGAAESAQRLSEAATAMNEMNATVQEVARNAGAASIASAETREKAQHG
SSIVAQSLQSIEGVRHISGQLKEDMTQLNEHTRDITRIMGVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKL
AEKTMASTLDVSSVIKAIQDSTQKSTASAENAVEQINRTTELADMSGQALQEIVATVDATADQVHAIATASEEQSAASEE
INLSIVQVNDMARQTADAMGEAARAVSDLAAQAQNLNTLIQNMKRA

Sequences:

>Translated_686_residues
MKLRLLPKMLLLILLPTLLGLCTVTWFSYTRGERALAVQIDDELAAVTRSQAGQLGSVAGLLHKVLDNAGHTSRISNFLK
AGSEWEKDALRPAMQASLKSIAEDFPLLAAVGLLSPEGVVVGHSNPAGINTNLSERPYFKAAMQGKSSVLNARSKVSGAV
TTVMAAPVMNDGKVLGVVYGTVDLTMFSAETVDAVRLGQTGTSFVYDGSGLLLMHPNKDYVGDEDGNLDWVRQILEKRNG
NLSYTWDGKEKLAYFQEIPDMDWLVVLSMERSEVLAPAAVLLRGNLMLMLAIVLVVGLIVFTVARSITTALKNEEAFVGR
VAEGQFEMSDQQRAVHEKCVARTDEIGGLSRGVGIMTENLQKFLSESEQRAQEAQKATEEARQAMHEAEEARRAAEGARR
DGMLAAAEQLEEVASVLSSASTELSAQIEQSDRGAAESAQRLSEAATAMNEMNATVQEVARNAGAASIASAETREKAQHG
SSIVAQSLQSIEGVRHISGQLKEDMTQLNEHTRDITRIMGVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKL
AEKTMASTLDVSSVIKAIQDSTQKSTASAENAVEQINRTTELADMSGQALQEIVATVDATADQVHAIATASEEQSAASEE
INLSIVQVNDMARQTADAMGEAARAVSDLAAQAQNLNTLIQNMKRA
>Mature_686_residues
MKLRLLPKMLLLILLPTLLGLCTVTWFSYTRGERALAVQIDDELAAVTRSQAGQLGSVAGLLHKVLDNAGHTSRISNFLK
AGSEWEKDALRPAMQASLKSIAEDFPLLAAVGLLSPEGVVVGHSNPAGINTNLSERPYFKAAMQGKSSVLNARSKVSGAV
TTVMAAPVMNDGKVLGVVYGTVDLTMFSAETVDAVRLGQTGTSFVYDGSGLLLMHPNKDYVGDEDGNLDWVRQILEKRNG
NLSYTWDGKEKLAYFQEIPDMDWLVVLSMERSEVLAPAAVLLRGNLMLMLAIVLVVGLIVFTVARSITTALKNEEAFVGR
VAEGQFEMSDQQRAVHEKCVARTDEIGGLSRGVGIMTENLQKFLSESEQRAQEAQKATEEARQAMHEAEEARRAAEGARR
DGMLAAAEQLEEVASVLSSASTELSAQIEQSDRGAAESAQRLSEAATAMNEMNATVQEVARNAGAASIASAETREKAQHG
SSIVAQSLQSIEGVRHISGQLKEDMTQLNEHTRDITRIMGVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKL
AEKTMASTLDVSSVIKAIQDSTQKSTASAENAVEQINRTTELADMSGQALQEIVATVDATADQVHAIATASEEQSAASEE
INLSIVQVNDMARQTADAMGEAARAVSDLAAQAQNLNTLIQNMKRA

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=241, Percent_Identity=33.6099585062241, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787690, Length=398, Percent_Identity=28.391959798995, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=33.1967213114754, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789453, Length=258, Percent_Identity=27.5193798449612, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 73406; Mature: 73406

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRLLPKMLLLILLPTLLGLCTVTWFSYTRGERALAVQIDDELAAVTRSQAGQLGSVAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHH
LLHKVLDNAGHTSRISNFLKAGSEWEKDALRPAMQASLKSIAEDFPLLAAVGLLSPEGVV
HHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VGHSNPAGINTNLSERPYFKAAMQGKSSVLNARSKVSGAVTTVMAAPVMNDGKVLGVVYG
EECCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TVDLTMFSAETVDAVRLGQTGTSFVYDGSGLLLMHPNKDYVGDEDGNLDWVRQILEKRNG
HHHEEEECHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
NLSYTWDGKEKLAYFQEIPDMDWLVVLSMERSEVLAPAAVLLRGNLMLMLAIVLVVGLIV
CEEEEECCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FTVARSITTALKNEEAFVGRVAEGQFEMSDQQRAVHEKCVARTDEIGGLSRGVGIMTENL
HHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHH
QKFLSESEQRAQEAQKATEEARQAMHEAEEARRAAEGARRDGMLAAAEQLEEVASVLSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHH
STELSAQIEQSDRGAAESAQRLSEAATAMNEMNATVQEVARNAGAASIASAETREKAQHG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SSIVAQSLQSIEGVRHISGQLKEDMTQLNEHTRDITRIMGVISDIADQTNLLALNAAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHH
ARAGEAGRGFAVVADEVRKLAEKTMASTLDVSSVIKAIQDSTQKSTASAENAVEQINRTT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELADMSGQALQEIVATVDATADQVHAIATASEEQSAASEEINLSIVQVNDMARQTADAMG
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHCCEEEEEEHHHHHHHHHHHH
EAARAVSDLAAQAQNLNTLIQNMKRA
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLRLLPKMLLLILLPTLLGLCTVTWFSYTRGERALAVQIDDELAAVTRSQAGQLGSVAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHH
LLHKVLDNAGHTSRISNFLKAGSEWEKDALRPAMQASLKSIAEDFPLLAAVGLLSPEGVV
HHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
VGHSNPAGINTNLSERPYFKAAMQGKSSVLNARSKVSGAVTTVMAAPVMNDGKVLGVVYG
EECCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TVDLTMFSAETVDAVRLGQTGTSFVYDGSGLLLMHPNKDYVGDEDGNLDWVRQILEKRNG
HHHEEEECHHHHHHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
NLSYTWDGKEKLAYFQEIPDMDWLVVLSMERSEVLAPAAVLLRGNLMLMLAIVLVVGLIV
CEEEEECCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FTVARSITTALKNEEAFVGRVAEGQFEMSDQQRAVHEKCVARTDEIGGLSRGVGIMTENL
HHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHH
QKFLSESEQRAQEAQKATEEARQAMHEAEEARRAAEGARRDGMLAAAEQLEEVASVLSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHH
STELSAQIEQSDRGAAESAQRLSEAATAMNEMNATVQEVARNAGAASIASAETREKAQHG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SSIVAQSLQSIEGVRHISGQLKEDMTQLNEHTRDITRIMGVISDIADQTNLLALNAAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHH
ARAGEAGRGFAVVADEVRKLAEKTMASTLDVSSVIKAIQDSTQKSTASAENAVEQINRTT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELADMSGQALQEIVATVDATADQVHAIATASEEQSAASEEINLSIVQVNDMARQTADAMG
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHCCEEEEEEHHHHHHHHHHHH
EAARAVSDLAAQAQNLNTLIQNMKRA
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]