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The map label for this gene is ybdN [H]

Identifier: 220904845

GI number: 220904845

Start: 1898567

End: 1899757

Strand: Reverse

Name: ybdN [H]

Synonym: Ddes_1579

Alternate gene names: 220904845

Gene position: 1899757-1898567 (Counterclockwise)

Preceding gene: 220904846

Following gene: 220904844

Centisome position: 66.11

GC content: 53.57

Gene sequence:

>1191_bases
ATGAAGAAAAAATATCGCGATATCGATGTGTTTACTGCTGCCGTCCAGAGGATCGAAGCGATATTTGAAAATTTTGAGCG
GGTATATGTATCATTTTCAGGCGGTAAAGATTCGGGCTGCCTTGTTCATCTGGCTCTGGAAGTGGCGCGAAGAAAAAAAA
GGCTTCCGCTTGATGTGCTGCACATAGATCTTGAGGCCTGGTATAGGCACACTGCCGATTTTGTCGCCAGAATCATGACC
CGGCCGGAAATCAGGCCACACTGGATTTGCCTGCCCCTGCATCTGCGCAATGCCGTAAGCCAGACCCAGCCGCACTGGCT
CTGCTGGGATCCCGAAGCCCGTGCGGAATGGATACGTGAACTTCCCCGGCATCCGGGAGTTATCAGTGATGAAAAACATT
TTTCATGGTTCCGGCGCGGGATGGAGTTTGAAGAGTTTGTGCCTTTGTTCGGGCAGCATTTTTCTCAGGAAAATCCCTGC
GCCTGCCTTGTGGGCATTCGAAGTGATGAAAGCCTGAATCGTTTTCGCACCATCAAGTCGTGGACCAAGCGGCGCTGGAA
TCGTCATGGGTGGACTACGGTTTCTGGAACCGGGCTTGTCAACGCCTATCCGATATATGACTGGCGGACAGAAGATATCT
GGACGGCTCACGGGCGGATGCAGTGGGACTATAACCATATCTACGACCTTATGCATATGGCGGGGCTTAGTCTTGCACAA
ATGCGCCTTTGCCAGCCATTTGGCGATGACCAGCGAAAGAGCCTCTGGCTTTTCAAGATTCTGGAGCCGGAGACGTGGGC
GCGGCTTGTCAGCCGGGTGCAGGGGGCGAACTTCGGCAACCGGCACGCCGCAACTTCCGGCAATGTGATGGGCAATTATC
ACATAAGCCTTCCGGAAGGCCATACATGGCAAAGCTACTGCGAATTTCTTCTGTCTTCCATGCCTGACAGTACGGCGGAT
CATTACCGCAACAAGATTCACAGTTTTGTGCGCTGGTGGCGCGAACACGGTGTTGCGGTTATCCCGGATGAAGCGGAGCC
GCGGCTGGAGGCCGCCCGCAAAGCGCCGAGCTGGCGGCGGATCTGCAAGGTGCTTTTAAAAAATGACTACTGGTGCAAAG
GCCTTTCTTTCAGTCAGACAAAAAGGGAAATGGAAAAGCAGTTGGAGTGGGTGCTGCGTGTGGGGAGGTAG

Upstream 100 bases:

>100_bases
TTTATGCGATGCCAGATGTAATGCCGTCAAAAACTGGAGAAACTATGAGCATTATGAACTCAAATTTGTTTCATTACGGC
AAGGTAGAAGCTTTTTTATC

Downstream 100 bases:

>100_bases
GGCGGTTATGCGCATCGAAAAGTTTGTTCATGAGAGCGAGCCTGAAAAAAATGCACAGCTGTTTGGCAGGATAGGAGAGT
TTTGCGCCTGCGCCACCACA

Product: phosphoadenosine phosphosulfate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKKKYRDIDVFTAAVQRIEAIFENFERVYVSFSGGKDSGCLVHLALEVARRKKRLPLDVLHIDLEAWYRHTADFVARIMT
RPEIRPHWICLPLHLRNAVSQTQPHWLCWDPEARAEWIRELPRHPGVISDEKHFSWFRRGMEFEEFVPLFGQHFSQENPC
ACLVGIRSDESLNRFRTIKSWTKRRWNRHGWTTVSGTGLVNAYPIYDWRTEDIWTAHGRMQWDYNHIYDLMHMAGLSLAQ
MRLCQPFGDDQRKSLWLFKILEPETWARLVSRVQGANFGNRHAATSGNVMGNYHISLPEGHTWQSYCEFLLSSMPDSTAD
HYRNKIHSFVRWWREHGVAVIPDEAEPRLEAARKAPSWRRICKVLLKNDYWCKGLSFSQTKREMEKQLEWVLRVGR

Sequences:

>Translated_396_residues
MKKKYRDIDVFTAAVQRIEAIFENFERVYVSFSGGKDSGCLVHLALEVARRKKRLPLDVLHIDLEAWYRHTADFVARIMT
RPEIRPHWICLPLHLRNAVSQTQPHWLCWDPEARAEWIRELPRHPGVISDEKHFSWFRRGMEFEEFVPLFGQHFSQENPC
ACLVGIRSDESLNRFRTIKSWTKRRWNRHGWTTVSGTGLVNAYPIYDWRTEDIWTAHGRMQWDYNHIYDLMHMAGLSLAQ
MRLCQPFGDDQRKSLWLFKILEPETWARLVSRVQGANFGNRHAATSGNVMGNYHISLPEGHTWQSYCEFLLSSMPDSTAD
HYRNKIHSFVRWWREHGVAVIPDEAEPRLEAARKAPSWRRICKVLLKNDYWCKGLSFSQTKREMEKQLEWVLRVGR
>Mature_396_residues
MKKKYRDIDVFTAAVQRIEAIFENFERVYVSFSGGKDSGCLVHLALEVARRKKRLPLDVLHIDLEAWYRHTADFVARIMT
RPEIRPHWICLPLHLRNAVSQTQPHWLCWDPEARAEWIRELPRHPGVISDEKHFSWFRRGMEFEEFVPLFGQHFSQENPC
ACLVGIRSDESLNRFRTIKSWTKRRWNRHGWTTVSGTGLVNAYPIYDWRTEDIWTAHGRMQWDYNHIYDLMHMAGLSLAQ
MRLCQPFGDDQRKSLWLFKILEPETWARLVSRVQGANFGNRHAATSGNVMGNYHISLPEGHTWQSYCEFLLSSMPDSTAD
HYRNKIHSFVRWWREHGVAVIPDEAEPRLEAARKAPSWRRICKVLLKNDYWCKGLSFSQTKREMEKQLEWVLRVGR

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=381, Percent_Identity=43.0446194225722, Blast_Score=308, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 46919; Mature: 46919

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYRDIDVFTAAVQRIEAIFENFERVYVSFSGGKDSGCLVHLALEVARRKKRLPLDVL
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHE
HIDLEAWYRHTADFVARIMTRPEIRPHWICLPLHLRNAVSQTQPHWLCWDPEARAEWIRE
EEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCHHHHHHHHH
LPRHPGVISDEKHFSWFRRGMEFEEFVPLFGQHFSQENPCACLVGIRSDESLNRFRTIKS
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
WTKRRWNRHGWTTVSGTGLVNAYPIYDWRTEDIWTAHGRMQWDYNHIYDLMHMAGLSLAQ
HHHHHHCCCCCEEECCCCCEEEEECCCCCCCCEEEECCEEEECHHHHHHHHHHHCCHHHH
MRLCQPFGDDQRKSLWLFKILEPETWARLVSRVQGANFGNRHAATSGNVMGNYHISLPEG
HHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC
HTWQSYCEFLLSSMPDSTADHYRNKIHSFVRWWREHGVAVIPDEAEPRLEAARKAPSWRR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCHHH
ICKVLLKNDYWCKGLSFSQTKREMEKQLEWVLRVGR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKYRDIDVFTAAVQRIEAIFENFERVYVSFSGGKDSGCLVHLALEVARRKKRLPLDVL
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHE
HIDLEAWYRHTADFVARIMTRPEIRPHWICLPLHLRNAVSQTQPHWLCWDPEARAEWIRE
EEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCHHHHHHHHH
LPRHPGVISDEKHFSWFRRGMEFEEFVPLFGQHFSQENPCACLVGIRSDESLNRFRTIKS
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
WTKRRWNRHGWTTVSGTGLVNAYPIYDWRTEDIWTAHGRMQWDYNHIYDLMHMAGLSLAQ
HHHHHHCCCCCEEECCCCCEEEEECCCCCCCCEEEECCEEEECHHHHHHHHHHHCCHHHH
MRLCQPFGDDQRKSLWLFKILEPETWARLVSRVQGANFGNRHAATSGNVMGNYHISLPEG
HHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC
HTWQSYCEFLLSSMPDSTADHYRNKIHSFVRWWREHGVAVIPDEAEPRLEAARKAPSWRR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCHHH
ICKVLLKNDYWCKGLSFSQTKREMEKQLEWVLRVGR
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]