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The map label for this gene is yiaO [C]

Identifier: 220904793

GI number: 220904793

Start: 1822224

End: 1823228

Strand: Reverse

Name: yiaO [C]

Synonym: Ddes_1525

Alternate gene names: 220904793

Gene position: 1823228-1822224 (Counterclockwise)

Preceding gene: 220904794

Following gene: 220904792

Centisome position: 63.45

GC content: 54.63

Gene sequence:

>1005_bases
ATGAAACGTCTTGTTGCGCTTTTTGTCGCCGTGGGTCTGATCTGTGGGCTTGCTCTCAGCACGGCTCCCACTGCGGGGGC
GGCTACTGTCATCAAAATGGCCGGTATGAAGCCGGAAGGTGAACCGGAAACCATAGGCATGCACCTGTTTGGCAAGTATC
TGAAAGAACTTTCCAACGGCAAATATGAAGTGCAGGTTTTCCCCAACAGCCAGCTTGGCAAGGAAGACGCCTACATTGCC
GCGACCCGCAAGGGCATTATTCAGATGTGCGCCACCGGCACCCAGACCTCGGCGCTGCATCCGGCCATGGCCATGCTTGA
AACCCCCATGCTGTTCGACAATCTTGACCATGCCCGCCGCGCCATGGAAGGCAAGACGTTTGATCTGATCAATGAGGGTT
TTACCGAAAAGTCCGGTCTGCGTACCCTTAACGCCTTTCCTTTGGGCTTCCGCCACTTCTATTCCAAAAAGCCCATCAAG
GACGTGAAGGATCTTGAAGGCATGCGCATGCGTGTACCCAATATTCCCCTGTACACCAACTTTGCCAAGGAATGCGGCAT
CAGCGGGCAGCCCATGCCCTTCGCCGAAGTCCCTGGCGCCCTTGACCAGGGTGTGATTGACGGCGGCGACAGCCCCCTTG
CGGACATCGTCAGCCTCAAGATGTACGAAATCACTCCCGAGATCAGCCTTTCCGGCCATATCCTGGTCATCCATTCCCTC
TACATCAACGACAAATTCTTCAAGTCCCTGCCTGAACAGGACCAGAAGTGGATTGAAGAGGCCGCCAAACGTTCCGCCGA
TGACGTGTGGGCTATGGTTGCGGACGGCGATGAAAAGGCCAAGGCCACCATTCTTGCCAACAAGGGCAATATTCATGAGC
CGAGCAAGGAACTTCATGAGCATCTGGTGAATGCCGGCAAGCGCAGCTGGAAGCTTTTTTACGACACTGTACCCAATGCC
CAGGCTATTCTTGATAGCGCCGACAGCTATCGTGAATCCAAATAA

Upstream 100 bases:

>100_bases
GTATATGTGTGCGCTGCGGGGGACGGGGTTGTCGCCCGTGCGTTCACTGGTGGGCGGTTCTGCCGTTCACGCTGAACATA
AAAAATTTGGAGGATTTGTA

Downstream 100 bases:

>100_bases
GACACAGTATGTTGCTACAAAGGGCCAGAAAGCATTTTCCGGTCCTTTGTAGCAAGCAAGCCAGACAGGCCGTGCCGCAT
GACAGGCGGCTGCGTGCCGT

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRLVALFVAVGLICGLALSTAPTAGAATVIKMAGMKPEGEPETIGMHLFGKYLKELSNGKYEVQVFPNSQLGKEDAYIA
ATRKGIIQMCATGTQTSALHPAMAMLETPMLFDNLDHARRAMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIK
DVKDLEGMRMRVPNIPLYTNFAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIHSL
YINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHEHLVNAGKRSWKLFYDTVPNA
QAILDSADSYRESK

Sequences:

>Translated_334_residues
MKRLVALFVAVGLICGLALSTAPTAGAATVIKMAGMKPEGEPETIGMHLFGKYLKELSNGKYEVQVFPNSQLGKEDAYIA
ATRKGIIQMCATGTQTSALHPAMAMLETPMLFDNLDHARRAMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIK
DVKDLEGMRMRVPNIPLYTNFAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIHSL
YINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHEHLVNAGKRSWKLFYDTVPNA
QAILDSADSYRESK
>Mature_334_residues
MKRLVALFVAVGLICGLALSTAPTAGAATVIKMAGMKPEGEPETIGMHLFGKYLKELSNGKYEVQVFPNSQLGKEDAYIA
ATRKGIIQMCATGTQTSALHPAMAMLETPMLFDNLDHARRAMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIK
DVKDLEGMRMRVPNIPLYTNFAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIHSL
YINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHEHLVNAGKRSWKLFYDTVPNA
QAILDSADSYRESK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=269, Percent_Identity=29.368029739777, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36735; Mature: 36735

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVALFVAVGLICGLALSTAPTAGAATVIKMAGMKPEGEPETIGMHLFGKYLKELSNG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
KYEVQVFPNSQLGKEDAYIAATRKGIIQMCATGTQTSALHPAMAMLETPMLFDNLDHARR
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCHHHHHH
AMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIKDVKDLEGMRMRVPNIPLYTN
HHCCCHHHHHHCCCCCCCCCEEECCCCCHHHHHHCCCCCHHHHHCCCCEEECCCCCEEEC
FAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIHSL
HHHHCCCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEE
YINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHE
HHCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHH
HLVNAGKRSWKLFYDTVPNAQAILDSADSYRESK
HHHHCCCCCEEEEEECCCCHHHHHHCHHHHCCCC
>Mature Secondary Structure
MKRLVALFVAVGLICGLALSTAPTAGAATVIKMAGMKPEGEPETIGMHLFGKYLKELSNG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
KYEVQVFPNSQLGKEDAYIAATRKGIIQMCATGTQTSALHPAMAMLETPMLFDNLDHARR
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCHHHHHH
AMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIKDVKDLEGMRMRVPNIPLYTN
HHCCCHHHHHHCCCCCCCCCEEECCCCCHHHHHHCCCCCHHHHHCCCCEEECCCCCEEEC
FAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIHSL
HHHHCCCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEE
YINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHE
HHCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHH
HLVNAGKRSWKLFYDTVPNAQAILDSADSYRESK
HHHHCCCCCEEEEEECCCCHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]