| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is katA [H]
Identifier: 220904762
GI number: 220904762
Start: 1784948
End: 1786405
Strand: Reverse
Name: katA [H]
Synonym: Ddes_1494
Alternate gene names: 220904762
Gene position: 1786405-1784948 (Counterclockwise)
Preceding gene: 220904763
Following gene: 220904761
Centisome position: 62.17
GC content: 55.28
Gene sequence:
>1458_bases ATGTCGAACGACCAGAACAAACTTACCAATAATGCCGGTGCGCCAGTGGCTGACAACAACAGGGTGCTTACTGCAGGGCC GCGTGGCCCCATGTTGTTGCAGGACGTATGGTTTCTTGAAAAGCTGGCCCATTTCGACCGTGAAGTTATCCCGGAACGGC GCATGCACGCCAAAGGGTCGGGCGCTTACGGCACTTTTACTGTCACGCACGATATCACCCGTTTTACTAAAGCTTCCCTC TTTTCTCAGATAGGCAAAAAAACAGATCTTTTTGTGCGCTTTTCCACAGTGGCGGGTGAACGCGGCGCGGCCGATGCCGA GCGTGACATCCGCGGATTTGCTATCAAGTTCTATACAGATGAAGGCAATTTTGACCTTGTGGGTAATAACACTCCCGTTT TTTTCCTGCGGGATCCTTTAAAATTTCCCGACCTCAACCATGTGGTCAAACGCAATCCGCGCACCAACATGCACAGCGCC CAGGACAACTGGGATTTCTGGTCTCTCTTGCCCGAAGCCCTGCATCAGGTCACCGTGGTCATGAGCGATCGCGGTATTCC GGCCTCGTATCGCCACATGCACGGCTTCGGCAGCCATACTTTCAGTTTTATCAATGCGGACAATGAGCGCTTCTGGGTCA AGTTTCACTTTAAAACCCAGCAGGGAATCAAAAATCTTACCGATGCCGAGGCTCAGGATCTTGTGGGCCGCGACCGCGAC AGTCATCAGCGCGATCTGTTTGAGCATATTGAAAAAGGCGACTTTCCTCGCTGGAAGCTTTTTGTGCAGGTCATGCCCGA AACTGACGCTGAAAAACTGCCTTACCATCCCTTTGACCTCACCAAGGTCTGGTACCATAAAGACGTACCCATGTACGAAG TGGGTGTGCTGGAACTGAACCGCAATCCTGAAAACTATTTTGCAGAGGTGGAGCAGGCTGCGTTCAACCCCGCCAATATC GTGCCCGGTATCGGTTTTTCGCCGGACAAGATGCTTCAGGGCCGCCTGTTCTCCTACGGCGATGCACAGCGCTACCGCCT GGGCGTGAATCACCACCTTATCCCCGTGAATACGGCGCGCTGCCCCTTCCACAGCTATCATCGCGATGGTCAGATGCGCG TGGACGGCAACTATGGCGGCCATACCAACTATGAGCCCAACAGTTACGGCGCCTGGCAGGAACAGCCTGAAACTGCGGAA CCGCCCCTGAAAATCAATGGCGACGCCGACCACTGGTCCTACCCTTGCGATGACGCGGACTACTTCGAGCAGCCGGGCAA ACTGTTCCGCCTGATGACGCCGGAACAGCAGGAGGCACTGTTTGGCAATACGGCCCGCAACCTTGGTGATGCCCCCAGGG AAATAAAGCTGCGGCACATCCGCAACTGCGCCAAGGCCGATGCGGCCTACGGCGCGGGAGTGGCCAGGGCCTGCGGCATT GACCCCGCAGAAATATAG
Upstream 100 bases:
>100_bases CATATGGGCCTATCCATGTCATCTTCCTGCAAGAGGCGGTCACTGAGTCCGGGGCCGCAATTTTCCTGGACTGCACAGAC AAACCAAGGAGACGACCACT
Downstream 100 bases:
>100_bases AGTCCCGGGCTGTCAGGTCTTACTGATCTGCAGCCCGGCAGTCTGACCCTGGCTTTCTTCTGACACTTCCCGTCCGGCAG CCTTCCTGTCGGCATGTGCC
Product: Catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MSNDQNKLTNNAGAPVADNNRVLTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITRFTKASL FSQIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTDEGNFDLVGNNTPVFFLRDPLKFPDLNHVVKRNPRTNMHSA QDNWDFWSLLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFINADNERFWVKFHFKTQQGIKNLTDAEAQDLVGRDRD SHQRDLFEHIEKGDFPRWKLFVQVMPETDAEKLPYHPFDLTKVWYHKDVPMYEVGVLELNRNPENYFAEVEQAAFNPANI VPGIGFSPDKMLQGRLFSYGDAQRYRLGVNHHLIPVNTARCPFHSYHRDGQMRVDGNYGGHTNYEPNSYGAWQEQPETAE PPLKINGDADHWSYPCDDADYFEQPGKLFRLMTPEQQEALFGNTARNLGDAPREIKLRHIRNCAKADAAYGAGVARACGI DPAEI
Sequences:
>Translated_485_residues MSNDQNKLTNNAGAPVADNNRVLTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITRFTKASL FSQIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTDEGNFDLVGNNTPVFFLRDPLKFPDLNHVVKRNPRTNMHSA QDNWDFWSLLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFINADNERFWVKFHFKTQQGIKNLTDAEAQDLVGRDRD SHQRDLFEHIEKGDFPRWKLFVQVMPETDAEKLPYHPFDLTKVWYHKDVPMYEVGVLELNRNPENYFAEVEQAAFNPANI VPGIGFSPDKMLQGRLFSYGDAQRYRLGVNHHLIPVNTARCPFHSYHRDGQMRVDGNYGGHTNYEPNSYGAWQEQPETAE PPLKINGDADHWSYPCDDADYFEQPGKLFRLMTPEQQEALFGNTARNLGDAPREIKLRHIRNCAKADAAYGAGVARACGI DPAEI >Mature_484_residues SNDQNKLTNNAGAPVADNNRVLTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITRFTKASLF SQIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTDEGNFDLVGNNTPVFFLRDPLKFPDLNHVVKRNPRTNMHSAQ DNWDFWSLLPEALHQVTVVMSDRGIPASYRHMHGFGSHTFSFINADNERFWVKFHFKTQQGIKNLTDAEAQDLVGRDRDS HQRDLFEHIEKGDFPRWKLFVQVMPETDAEKLPYHPFDLTKVWYHKDVPMYEVGVLELNRNPENYFAEVEQAAFNPANIV PGIGFSPDKMLQGRLFSYGDAQRYRLGVNHHLIPVNTARCPFHSYHRDGQMRVDGNYGGHTNYEPNSYGAWQEQPETAEP PLKINGDADHWSYPCDDADYFEQPGKLFRLMTPEQQEALFGNTARNLGDAPREIKLRHIRNCAKADAAYGAGVARACGID PAEI
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=471, Percent_Identity=52.4416135881104, Blast_Score=493, Evalue=1e-139, Organism=Escherichia coli, GI48994891, Length=491, Percent_Identity=45.4175152749491, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI71998444, Length=472, Percent_Identity=51.4830508474576, Blast_Score=473, Evalue=1e-133, Organism=Caenorhabditis elegans, GI25147792, Length=472, Percent_Identity=49.7881355932203, Blast_Score=465, Evalue=1e-131, Organism=Caenorhabditis elegans, GI25151141, Length=472, Percent_Identity=49.7881355932203, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6320462, Length=485, Percent_Identity=46.1855670103093, Blast_Score=404, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6321525, Length=381, Percent_Identity=42.7821522309711, Blast_Score=310, Evalue=4e-85, Organism=Drosophila melanogaster, GI17981717, Length=471, Percent_Identity=48.8322717622081, Blast_Score=448, Evalue=1e-126, Organism=Drosophila melanogaster, GI19920968, Length=399, Percent_Identity=51.3784461152882, Blast_Score=429, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 55261; Mature: 55130
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDQNKLTNNAGAPVADNNRVLTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGS CCCCCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC GAYGTFTVTHDITRFTKASLFSQIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTD CCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHCCCEEEEEEEEC EGNFDLVGNNTPVFFLRDPLKFPDLNHVVKRNPRTNMHSAQDNWDFWSLLPEALHQVTVV CCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE MSDRGIPASYRHMHGFGSHTFSFINADNERFWVKFHFKTQQGIKNLTDAEAQDLVGRDRD EECCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEEEEECHHHHHHHCCHHHHHHHCCCCC SHQRDLFEHIEKGDFPRWKLFVQVMPETDAEKLPYHPFDLTKVWYHKDVPMYEVGVLELN HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC RNPENYFAEVEQAAFNPANIVPGIGFSPDKMLQGRLFSYGDAQRYRLGVNHHLIPVNTAR CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCEEECCCCEEEECCCCC CPFHSYHRDGQMRVDGNYGGHTNYEPNSYGAWQEQPETAEPPLKINGDADHWSYPCDDAD CCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCH YFEQPGKLFRLMTPEQQEALFGNTARNLGDAPREIKLRHIRNCAKADAAYGAGVARACGI HHHCCCCEEEECCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC DPAEI CCCCC >Mature Secondary Structure SNDQNKLTNNAGAPVADNNRVLTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGS CCCCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC GAYGTFTVTHDITRFTKASLFSQIGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTD CCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHCCCEEEEEEEEC EGNFDLVGNNTPVFFLRDPLKFPDLNHVVKRNPRTNMHSAQDNWDFWSLLPEALHQVTVV CCCEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE MSDRGIPASYRHMHGFGSHTFSFINADNERFWVKFHFKTQQGIKNLTDAEAQDLVGRDRD EECCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEEEEECHHHHHHHCCHHHHHHHCCCCC SHQRDLFEHIEKGDFPRWKLFVQVMPETDAEKLPYHPFDLTKVWYHKDVPMYEVGVLELN HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC RNPENYFAEVEQAAFNPANIVPGIGFSPDKMLQGRLFSYGDAQRYRLGVNHHLIPVNTAR CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCEEECCCCEEEECCCCC CPFHSYHRDGQMRVDGNYGGHTNYEPNSYGAWQEQPETAEPPLKINGDADHWSYPCDDAD CCCHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCH YFEQPGKLFRLMTPEQQEALFGNTARNLGDAPREIKLRHIRNCAKADAAYGAGVARACGI HHHCCCCEEEECCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC DPAEI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA