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The map label for this gene is ybhS [H]

Identifier: 220904759

GI number: 220904759

Start: 1780339

End: 1781466

Strand: Reverse

Name: ybhS [H]

Synonym: Ddes_1491

Alternate gene names: 220904759

Gene position: 1781466-1780339 (Counterclockwise)

Preceding gene: 220904760

Following gene: 220904758

Centisome position: 62.0

GC content: 57.8

Gene sequence:

>1128_bases
ATGAAAACAAAACTCTGGCTTCAGCAACTGCTGGCTCTTATCCGTAAGGAATTTCAGCAGATCGTGCGCGATCCTTCCTC
CTATCTGGTGGCCGGGGTATTGCCGCTGATTTTTCTGCTGCTCTTTGGCTACGGCATCACCCTGGATGCGGGGGTGCTGC
GCCTTGCAGTGCTTAATGAGAGCGGTGGCAGGCATTCGCTGGACCTGGCGGCGAATTTTGCCCATTCGCCGTGGTTTTCA
ACCGTTGAAGCCGGCAGCATGGATGAGGCGGCCCGCTTTATGCGGGATTCAAAGGTACAGGGCGTGCTGGTTTTCCGGCA
GGATTTCGATGCGGCACTGGCTCGCGGGGCAGCAGGAGAAATTCAGGTACTGGTCGATGGGGCCGAACCCAATACTGCCC
AGTATATCCAGAGCTACAGCCAGGGGCTGATAAGCAGGTGGCAGGCCACGGCCTTGCCGGGCGGGGCGGCGCTGGAGGCC
CCCATAAACCTGCAACCGCGCTACTGGTACAATCCGGCAGCCAAAAGTGTGCAGTTTCTTGTGCCGGGGGCCATTACCGT
CATCATGACGCTTATCGGCACGCTTCTGACTTCACTGGTTTTTGCCCGTGAGTGGGAGCGCGGGACCATGGAGGCCATGT
TTGCCACACCGGTAAGCCGCATGCAGCTTCTGCTCGGCAAGCTTATTCCCTATTTCTGCATGGGCATGTTCAGCATGGCT
CTCTGCGCCGGGGCTGCGGTACTGCTTTTTTCCGTGCCGTTTCGCGGCTCGTGGTGGGTTTTGCTGGTTATTTCTTCTGT
TTTTATGCTCAGTGCTCTTGGGCAGGGCCTGCTTATTTCCGTCACCCTGCGCGGGCAGCTTGTGGCCGCCGAGGCCGGGC
TGTTTTCAGGCTTTCTGCCGGCCCTGCTGCTGTCGGGATTTGTTTTTGACATCAACAGCATGCCCCCTGTCCTTCAGGCT
CTCACTCGGCTGTTGCCCGCCAGCTACTTCAACACCTGTTTGCGGACGATTTTTCTGACAGGCGATGTGTGGGGAATCTT
CGGCCCGAGCCTGGCCTTTATGGGGCTGCTGGCTGCGGTGCTGCTGGGCCTGGTTTACAAGAAGCTTGTAAAAAGGCTGG
ATGTATAA

Upstream 100 bases:

>100_bases
TACGACAGGCATAATCCCCAATAATATTGTATGTATGGTGCAAAAGCAACGTGATAATGCATACGGGGCCTGCCCGCACG
CTACACGCCTGTGACATAGT

Downstream 100 bases:

>100_bases
CATGGCGCGGCGCTTCACAGGCTTTCATGCAGCCAGGAAAATGGCGGCAGGGGGCATGACCCGGCTGAGCTCTTTTTTCC
CGCGTCTTGACTGGCGGCGT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKTKLWLQQLLALIRKEFQQIVRDPSSYLVAGVLPLIFLLLFGYGITLDAGVLRLAVLNESGGRHSLDLAANFAHSPWFS
TVEAGSMDEAARFMRDSKVQGVLVFRQDFDAALARGAAGEIQVLVDGAEPNTAQYIQSYSQGLISRWQATALPGGAALEA
PINLQPRYWYNPAAKSVQFLVPGAITVIMTLIGTLLTSLVFAREWERGTMEAMFATPVSRMQLLLGKLIPYFCMGMFSMA
LCAGAAVLLFSVPFRGSWWVLLVISSVFMLSALGQGLLISVTLRGQLVAAEAGLFSGFLPALLLSGFVFDINSMPPVLQA
LTRLLPASYFNTCLRTIFLTGDVWGIFGPSLAFMGLLAAVLLGLVYKKLVKRLDV

Sequences:

>Translated_375_residues
MKTKLWLQQLLALIRKEFQQIVRDPSSYLVAGVLPLIFLLLFGYGITLDAGVLRLAVLNESGGRHSLDLAANFAHSPWFS
TVEAGSMDEAARFMRDSKVQGVLVFRQDFDAALARGAAGEIQVLVDGAEPNTAQYIQSYSQGLISRWQATALPGGAALEA
PINLQPRYWYNPAAKSVQFLVPGAITVIMTLIGTLLTSLVFAREWERGTMEAMFATPVSRMQLLLGKLIPYFCMGMFSMA
LCAGAAVLLFSVPFRGSWWVLLVISSVFMLSALGQGLLISVTLRGQLVAAEAGLFSGFLPALLLSGFVFDINSMPPVLQA
LTRLLPASYFNTCLRTIFLTGDVWGIFGPSLAFMGLLAAVLLGLVYKKLVKRLDV
>Mature_375_residues
MKTKLWLQQLLALIRKEFQQIVRDPSSYLVAGVLPLIFLLLFGYGITLDAGVLRLAVLNESGGRHSLDLAANFAHSPWFS
TVEAGSMDEAARFMRDSKVQGVLVFRQDFDAALARGAAGEIQVLVDGAEPNTAQYIQSYSQGLISRWQATALPGGAALEA
PINLQPRYWYNPAAKSVQFLVPGAITVIMTLIGTLLTSLVFAREWERGTMEAMFATPVSRMQLLLGKLIPYFCMGMFSMA
LCAGAAVLLFSVPFRGSWWVLLVISSVFMLSALGQGLLISVTLRGQLVAAEAGLFSGFLPALLLSGFVFDINSMPPVLQA
LTRLLPASYFNTCLRTIFLTGDVWGIFGPSLAFMGLLAAVLLGLVYKKLVKRLDV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=369, Percent_Identity=45.2574525745258, Blast_Score=325, Evalue=3e-90,
Organism=Escherichia coli, GI48994943, Length=370, Percent_Identity=30.2702702702703, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787010, Length=370, Percent_Identity=30, Blast_Score=161, Evalue=6e-41,
Organism=Drosophila melanogaster, GI85725260, Length=396, Percent_Identity=23.2323232323232, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85725262, Length=400, Percent_Identity=23, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24650855, Length=373, Percent_Identity=22.7882037533512, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40797; Mature: 40797

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLWLQQLLALIRKEFQQIVRDPSSYLVAGVLPLIFLLLFGYGITLDAGVLRLAVLNE
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC
SGGRHSLDLAANFAHSPWFSTVEAGSMDEAARFMRDSKVQGVLVFRQDFDAALARGAAGE
CCCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCC
IQVLVDGAEPNTAQYIQSYSQGLISRWQATALPGGAALEAPINLQPRYWYNPAAKSVQFL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEE
VPGAITVIMTLIGTLLTSLVFAREWERGTMEAMFATPVSRMQLLLGKLIPYFCMGMFSMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LCAGAAVLLFSVPFRGSWWVLLVISSVFMLSALGQGLLISVTLRGQLVAAEAGLFSGFLP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHH
ALLLSGFVFDINSMPPVLQALTRLLPASYFNTCLRTIFLTGDVWGIFGPSLAFMGLLAAV
HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGLVYKKLVKRLDV
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTKLWLQQLLALIRKEFQQIVRDPSSYLVAGVLPLIFLLLFGYGITLDAGVLRLAVLNE
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECC
SGGRHSLDLAANFAHSPWFSTVEAGSMDEAARFMRDSKVQGVLVFRQDFDAALARGAAGE
CCCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCC
IQVLVDGAEPNTAQYIQSYSQGLISRWQATALPGGAALEAPINLQPRYWYNPAAKSVQFL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHCCCEEE
VPGAITVIMTLIGTLLTSLVFAREWERGTMEAMFATPVSRMQLLLGKLIPYFCMGMFSMA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LCAGAAVLLFSVPFRGSWWVLLVISSVFMLSALGQGLLISVTLRGQLVAAEAGLFSGFLP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHH
ALLLSGFVFDINSMPPVLQALTRLLPASYFNTCLRTIFLTGDVWGIFGPSLAFMGLLAAV
HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLGLVYKKLVKRLDV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]