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The map label for this gene is ybhR [H]

Identifier: 220904758

GI number: 220904758

Start: 1779129

End: 1780283

Strand: Reverse

Name: ybhR [H]

Synonym: Ddes_1490

Alternate gene names: 220904758

Gene position: 1780283-1779129 (Counterclockwise)

Preceding gene: 220904759

Following gene: 220904756

Centisome position: 61.96

GC content: 55.93

Gene sequence:

>1155_bases
ATGACCCGGCTGAGCTCTTTTTTCCCGCGTCTTGACTGGCGGCGTATGGCGACCATCGTGCGCAAGGAATTGCTGGTGCT
TTTGTGCAACCGCATTTCGCGCATTCTTATTATCGTGCCGCCGCTCATGCAAATCGTCATTTTTGGCTGGGCCGCCACAA
TGGAGGTGCGCAATGTGGATGTGGCCGTGCTCAATTATGACAGTGGCCGCTGGAGCCGAGACATCATCCATTCCATAGAA
GGCTCGCCCACGTTTCGCCGTATTGCGCATATAGAAGGGCAGGGGCAGATCCGTCCCACACTGGAGCAGCAGAAAGCTCT
TTTTGTACTGGTTTTTGACGAAGAGTTTTCGCGCCGCATCGATAAGGGCGAACCAGCGGAAGCACAGGTCATTCTGGACG
GGCGGCGGTCCAATGCGGCGCAGATCGCGGCCTATTACCTGGAGCGCATGACAGCACAGGTGGCGGCGGCCACCCCCCGT
GCGCAGGCGGCGCAAAATGTGGCGGCTGAAGTCCCGCAACTGGACATACGCATGCGCTGCTGGTTCAATCCCAATCTTGA
GTTTCAGTGGTTTTTTCTGCCCAACCTTATAGGCATGTTGAGTTTCATGCTGGGGCTGGTCGTGACGGGGCTTTCCGTAG
CGCGGGAGCGTGAGGTGGGGACTTTCGACCAGTTGCTGGTTTCTCCCGCCATACCTACGGAAATTGCTTTGGCAAAGCTG
GTGCCGGGCTGTCTTGTGGGCATGGTACACGGAACCATATTCCTGCTTATTTCCGTACTGGGCTTCGGTGTGCCGTTCAC
AGGTTCCGTGTTGCTGCTCTATGCGGCAATGCTTGTATTTGCGGCAGCCTCGGGCGGGGTCGGGCTTATGGTGTCTTCTC
TTTCGGCTACGCAACAGCAGGCGTTTCTTGGCGCATTTACTGTGGGTGTTCCCTGCATTCTTATTTCCGGAGCGGTCACT
CCGGTCATGAATATGCCGGTTTTTTTGCAATACGCCAGCCAGCTGAATCCGTTGCGGCATTTTACAACCATCACACAGGG
TGTTTTTCTGAAAGACATTACGGTGGCGGCCGCTGCGGTAAGTCTGGGCAAAATCACCTGTATCAGCATTGTTACCGTGG
CCGTGGCGGTATGGATGTTCAGGCGCAAGGCATAG

Upstream 100 bases:

>100_bases
CTGGGCCTGGTTTACAAGAAGCTTGTAAAAAGGCTGGATGTATAACATGGCGCGGCGCTTCACAGGCTTTCATGCAGCCA
GGAAAATGGCGGCAGGGGGC

Downstream 100 bases:

>100_bases
GGCTTTATGGGAGGCCTTTTGTCCACACGCTATCAACATCCAGCAAGGGCTTGCACCGGCAGTTTGGCAGATGCAGTCTC
AGCCGTAAACCCTTTTGAAA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTRLSSFFPRLDWRRMATIVRKELLVLLCNRISRILIIVPPLMQIVIFGWAATMEVRNVDVAVLNYDSGRWSRDIIHSIE
GSPTFRRIAHIEGQGQIRPTLEQQKALFVLVFDEEFSRRIDKGEPAEAQVILDGRRSNAAQIAAYYLERMTAQVAAATPR
AQAAQNVAAEVPQLDIRMRCWFNPNLEFQWFFLPNLIGMLSFMLGLVVTGLSVAREREVGTFDQLLVSPAIPTEIALAKL
VPGCLVGMVHGTIFLLISVLGFGVPFTGSVLLLYAAMLVFAAASGGVGLMVSSLSATQQQAFLGAFTVGVPCILISGAVT
PVMNMPVFLQYASQLNPLRHFTTITQGVFLKDITVAAAAVSLGKITCISIVTVAVAVWMFRRKA

Sequences:

>Translated_384_residues
MTRLSSFFPRLDWRRMATIVRKELLVLLCNRISRILIIVPPLMQIVIFGWAATMEVRNVDVAVLNYDSGRWSRDIIHSIE
GSPTFRRIAHIEGQGQIRPTLEQQKALFVLVFDEEFSRRIDKGEPAEAQVILDGRRSNAAQIAAYYLERMTAQVAAATPR
AQAAQNVAAEVPQLDIRMRCWFNPNLEFQWFFLPNLIGMLSFMLGLVVTGLSVAREREVGTFDQLLVSPAIPTEIALAKL
VPGCLVGMVHGTIFLLISVLGFGVPFTGSVLLLYAAMLVFAAASGGVGLMVSSLSATQQQAFLGAFTVGVPCILISGAVT
PVMNMPVFLQYASQLNPLRHFTTITQGVFLKDITVAAAAVSLGKITCISIVTVAVAVWMFRRKA
>Mature_383_residues
TRLSSFFPRLDWRRMATIVRKELLVLLCNRISRILIIVPPLMQIVIFGWAATMEVRNVDVAVLNYDSGRWSRDIIHSIEG
SPTFRRIAHIEGQGQIRPTLEQQKALFVLVFDEEFSRRIDKGEPAEAQVILDGRRSNAAQIAAYYLERMTAQVAAATPRA
QAAQNVAAEVPQLDIRMRCWFNPNLEFQWFFLPNLIGMLSFMLGLVVTGLSVAREREVGTFDQLLVSPAIPTEIALAKLV
PGCLVGMVHGTIFLLISVLGFGVPFTGSVLLLYAAMLVFAAASGGVGLMVSSLSATQQQAFLGAFTVGVPCILISGAVTP
VMNMPVFLQYASQLNPLRHFTTITQGVFLKDITVAAAAVSLGKITCISIVTVAVAVWMFRRKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=370, Percent_Identity=40.8108108108108, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1787011, Length=349, Percent_Identity=28.3667621776504, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI48994943, Length=350, Percent_Identity=27.4285714285714, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI226510979, Length=339, Percent_Identity=27.1386430678466, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42170; Mature: 42039

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLSSFFPRLDWRRMATIVRKELLVLLCNRISRILIIVPPLMQIVIFGWAATMEVRNVD
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHEEEEECCE
VAVLNYDSGRWSRDIIHSIEGSPTFRRIAHIEGQGQIRPTLEQQKALFVLVFDEEFSRRI
EEEEECCCCCHHHHHHHHCCCCCHHHHHHEECCCCCCCCCHHCCCEEEEEEECCHHHHHC
DKGEPAEAQVILDGRRSNAAQIAAYYLERMTAQVAAATPRAQAAQNVAAEVPQLDIRMRC
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEE
WFNPNLEFQWFFLPNLIGMLSFMLGLVVTGLSVAREREVGTFDQLLVSPAIPTEIALAKL
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH
VPGCLVGMVHGTIFLLISVLGFGVPFTGSVLLLYAAMLVFAAASGGVGLMVSSLSATQQQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFLGAFTVGVPCILISGAVTPVMNMPVFLQYASQLNPLRHFTTITQGVFLKDITVAAAAV
HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGKITCISIVTVAVAVWMFRRKA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLSSFFPRLDWRRMATIVRKELLVLLCNRISRILIIVPPLMQIVIFGWAATMEVRNVD
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHEEEEECCE
VAVLNYDSGRWSRDIIHSIEGSPTFRRIAHIEGQGQIRPTLEQQKALFVLVFDEEFSRRI
EEEEECCCCCHHHHHHHHCCCCCHHHHHHEECCCCCCCCCHHCCCEEEEEEECCHHHHHC
DKGEPAEAQVILDGRRSNAAQIAAYYLERMTAQVAAATPRAQAAQNVAAEVPQLDIRMRC
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEE
WFNPNLEFQWFFLPNLIGMLSFMLGLVVTGLSVAREREVGTFDQLLVSPAIPTEIALAKL
EECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH
VPGCLVGMVHGTIFLLISVLGFGVPFTGSVLLLYAAMLVFAAASGGVGLMVSSLSATQQQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AFLGAFTVGVPCILISGAVTPVMNMPVFLQYASQLNPLRHFTTITQGVFLKDITVAAAAV
HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLGKITCISIVTVAVAVWMFRRKA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]