| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904701
Identifier: 220904701
GI number: 220904701
Start: 1715454
End: 1716344
Strand: Reverse
Name: 220904701
Synonym: Ddes_1433
Alternate gene names: NA
Gene position: 1716344-1715454 (Counterclockwise)
Preceding gene: 220904702
Following gene: 220904700
Centisome position: 59.73
GC content: 63.3
Gene sequence:
>891_bases ATGACCCGTCATGGCAGTGCGGGCGGGATGTTTCGCACGGTTTTGCTCACGGCTGTATGCATGACATTTTTTGCGGCAAA CTCGCTGCTATGTCGCATGGCGCTCTTCGGTACGGGCATGGACGCTGTCAGCTATACCGTTTTGCGGGCAGTTTCGGCAG CCGTTGTTTTGTGGCTGTTCATGGCACTGCGGGGGCAGCGCGTTTTGCAGCACGGAAACCGGCGAGCCGCCCTGGCCCTC TTCGCTTATATGGCCTGCTTTTCCTGGGCCTATGTAAACCTGCCCGCCGCAGCGGGAGCGCTTATTATTGCCGTGGCCGT GCAGGTAACCATGGTGGGCGTGGGCGTGATGCTGGGGCAACGCCCCAGCCGGGCGCAGACGCTGGGCATCAGCCTGGCCC TGGCGGGTCTTGTATATCTGCTTTTACCCGGTCTGGACGCGCCGCCCCTGTGGCCTTCGGCCATCATTTTTCTTTCGGGC GCTTCATGGGCGGTCTATACACTGTGCGGGCGCAACAACAGTGCTCCTGTGGCCGCCACGGCAGGCAATTTTGTGCGTTG CCTGCCCCTGGCGCTTGTGCTGCTGCTTCCTTCCTGGCTGTATCCCGACGGAATGTGGGCGGGCGGCGGCCTCTCTCTGC CTCCGGCGGGCGTTGCCTGCGCGCTGGCTGCCGGAGCCGTTGCTTCGGCGCTTGGCTATGTGCTGTGGTATTCCGTCCTG CCATGCCTCAGCGTACCAAGCGCTGCCGTGGTGCAACTGAGCGTGCCGCTTATTACCGCCCTTGGCGGTGCGGCCTTTAT GGGCGAGGCCGTCACACTGCGCCTCGGCGTAAGCGCGGCGGCCATTCTTGGCGGCATTTTCTGCGCTACCGTGCTTGCTG TGCGGCGTTAG
Upstream 100 bases:
>100_bases AGGCCATAGAGGTGCATGGCTCGGTGCAGCGTGTTGCGGAACTTTTTCAGGTTAACCGCAGCACCATCTTCAGGAAGCTG CAAGGTACAAGGCAGACACG
Downstream 100 bases:
>100_bases GCAATCTCACTTCGACATTGCCCTGACGAATGCGCGAGCAGCTATGGGGCATAACGGGCGTGTCTCAAATTTTGAGCATA TACATTCTCAAAGTTAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTRHGSAGGMFRTVLLTAVCMTFFAANSLLCRMALFGTGMDAVSYTVLRAVSAAVVLWLFMALRGQRVLQHGNRRAALAL FAYMACFSWAYVNLPAAAGALIIAVAVQVTMVGVGVMLGQRPSRAQTLGISLALAGLVYLLLPGLDAPPLWPSAIIFLSG ASWAVYTLCGRNNSAPVAATAGNFVRCLPLALVLLLPSWLYPDGMWAGGGLSLPPAGVACALAAGAVASALGYVLWYSVL PCLSVPSAAVVQLSVPLITALGGAAFMGEAVTLRLGVSAAAILGGIFCATVLAVRR
Sequences:
>Translated_296_residues MTRHGSAGGMFRTVLLTAVCMTFFAANSLLCRMALFGTGMDAVSYTVLRAVSAAVVLWLFMALRGQRVLQHGNRRAALAL FAYMACFSWAYVNLPAAAGALIIAVAVQVTMVGVGVMLGQRPSRAQTLGISLALAGLVYLLLPGLDAPPLWPSAIIFLSG ASWAVYTLCGRNNSAPVAATAGNFVRCLPLALVLLLPSWLYPDGMWAGGGLSLPPAGVACALAAGAVASALGYVLWYSVL PCLSVPSAAVVQLSVPLITALGGAAFMGEAVTLRLGVSAAAILGGIFCATVLAVRR >Mature_295_residues TRHGSAGGMFRTVLLTAVCMTFFAANSLLCRMALFGTGMDAVSYTVLRAVSAAVVLWLFMALRGQRVLQHGNRRAALALF AYMACFSWAYVNLPAAAGALIIAVAVQVTMVGVGVMLGQRPSRAQTLGISLALAGLVYLLLPGLDAPPLWPSAIIFLSGA SWAVYTLCGRNNSAPVAATAGNFVRCLPLALVLLLPSWLYPDGMWAGGGLSLPPAGVACALAAGAVASALGYVLWYSVLP CLSVPSAAVVQLSVPLITALGGAAFMGEAVTLRLGVSAAAILGGIFCATVLAVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30431; Mature: 30300
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHGSAGGMFRTVLLTAVCMTFFAANSLLCRMALFGTGMDAVSYTVLRAVSAAVVLWLF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MALRGQRVLQHGNRRAALALFAYMACFSWAYVNLPAAAGALIIAVAVQVTMVGVGVMLGQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC RPSRAQTLGISLALAGLVYLLLPGLDAPPLWPSAIIFLSGASWAVYTLCGRNNSAPVAAT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCEEEC AGNFVRCLPLALVLLLPSWLYPDGMWAGGGLSLPPAGVACALAAGAVASALGYVLWYSVL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PCLSVPSAAVVQLSVPLITALGGAAFMGEAVTLRLGVSAAAILGGIFCATVLAVRR HHHCCCCHHHHEEHHHHHHHHCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRHGSAGGMFRTVLLTAVCMTFFAANSLLCRMALFGTGMDAVSYTVLRAVSAAVVLWLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MALRGQRVLQHGNRRAALALFAYMACFSWAYVNLPAAAGALIIAVAVQVTMVGVGVMLGQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC RPSRAQTLGISLALAGLVYLLLPGLDAPPLWPSAIIFLSGASWAVYTLCGRNNSAPVAAT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCEEEC AGNFVRCLPLALVLLLPSWLYPDGMWAGGGLSLPPAGVACALAAGAVASALGYVLWYSVL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PCLSVPSAAVVQLSVPLITALGGAAFMGEAVTLRLGVSAAAILGGIFCATVLAVRR HHHCCCCHHHHEEHHHHHHHHCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043; 1938886 [H]