Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is aat [H]
Identifier: 220904696
GI number: 220904696
Start: 1709147
End: 1709941
Strand: Reverse
Name: aat [H]
Synonym: Ddes_1428
Alternate gene names: 220904696
Gene position: 1709941-1709147 (Counterclockwise)
Preceding gene: 220904697
Following gene: 220904694
Centisome position: 59.51
GC content: 62.14
Gene sequence:
>795_bases ATGGCCGCCCAGTTTCCACCGCTGGAGGCTGCGCGCAAGGACGGTCTGCTCTGCTTTGGCGGCGACCTGCACCCCGAACG GCTTCTGGCGGCCTACAGCAGGGGCATTTTCCCCTGGTATGAAGCTGGCCTGCCCATACTCTGGTGGTCGCCCGACCCGC GCTGCGTGCTGCCGCTGGATGCATTCCACCTGCCCAGGCGCAGCGCCCGTCATTTGCGCAACAAACCTTTTGAACTGACG CTCAACGCTGCCTTCAGCGAAGTTATCCACGCCTGCGCCGCACCGCGCCATGAGGGCGGGGGAACCTGGATTCTGCCCGA AATGGCAGAAGCCTACCAGTGCCTGCATCACATGGGTTATGCCCACAGTGTGGAGGCATGGCATGAGGGCGAACTGGTCG GCGGATTGTACGGAGTGGGGCTTGGGCGGGCGTTTTTTGGCGAGTCGATGTTTCATGTGCTGCCCGAAGCCTCGCGCGCG GCTCTGGCGGGCCTTGTGGCCCTGCTGCGCCTGCGTGGCGTTACTTTGCTGGACTGCCAGCAGGAAACCCCGCACATCAT GAAGATGGGCGGGGTTCTGCTGCCGCGTGAGCTTTTTGTGCAAAAACTGGATCAGGCACTTGCGCCGGAGCATCCTGCCG GGACTTTGTATCGCCACGGATCTGCCGTGGATCCATTTTCCGGCTCCACATCCACCGATGTGGAGCAGACAGCTGTTTGC GGTGCCATCTGGCAGCCCTGGCATGAACGCTACGACTATTCTTTGTCCAGCGGTTCGTGGGCGCTCAGATCATAG
Upstream 100 bases:
>100_bases ACTTCACCGTCCGCAACCGCAACAAGGCGGCGTGCCCGCTGTTTGTACAAAGCAGGGCAAAGCCGCTGCGAGGGGGCGCC CATTGAGGATTTACACAGCC
Downstream 100 bases:
>100_bases TATCCGTGGGCCGCGAAGGGCAGGTTGTAGTCGCGTACGGCGTCAAAGCGGATGAAGCCGGTGGTCTTGTTTTCGGGAAT GCCCGCCAGCGGGGCCACGC
Product: leucyl/phenylalanyl-tRNA/protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAAQFPPLEAARKDGLLCFGGDLHPERLLAAYSRGIFPWYEAGLPILWWSPDPRCVLPLDAFHLPRRSARHLRNKPFELT LNAAFSEVIHACAAPRHEGGGTWILPEMAEAYQCLHHMGYAHSVEAWHEGELVGGLYGVGLGRAFFGESMFHVLPEASRA ALAGLVALLRLRGVTLLDCQQETPHIMKMGGVLLPRELFVQKLDQALAPEHPAGTLYRHGSAVDPFSGSTSTDVEQTAVC GAIWQPWHERYDYSLSSGSWALRS
Sequences:
>Translated_264_residues MAAQFPPLEAARKDGLLCFGGDLHPERLLAAYSRGIFPWYEAGLPILWWSPDPRCVLPLDAFHLPRRSARHLRNKPFELT LNAAFSEVIHACAAPRHEGGGTWILPEMAEAYQCLHHMGYAHSVEAWHEGELVGGLYGVGLGRAFFGESMFHVLPEASRA ALAGLVALLRLRGVTLLDCQQETPHIMKMGGVLLPRELFVQKLDQALAPEHPAGTLYRHGSAVDPFSGSTSTDVEQTAVC GAIWQPWHERYDYSLSSGSWALRS >Mature_263_residues AAQFPPLEAARKDGLLCFGGDLHPERLLAAYSRGIFPWYEAGLPILWWSPDPRCVLPLDAFHLPRRSARHLRNKPFELTL NAAFSEVIHACAAPRHEGGGTWILPEMAEAYQCLHHMGYAHSVEAWHEGELVGGLYGVGLGRAFFGESMFHVLPEASRAA LAGLVALLRLRGVTLLDCQQETPHIMKMGGVLLPRELFVQKLDQALAPEHPAGTLYRHGSAVDPFSGSTSTDVEQTAVCG AIWQPWHERYDYSLSSGSWALRS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=203, Percent_Identity=47.2906403940887, Blast_Score=184, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 29145; Mature: 29013
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQFPPLEAARKDGLLCFGGDLHPERLLAAYSRGIFPWYEAGLPILWWSPDPRCVLPLD CCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEEECH AFHLPRRSARHLRNKPFELTLNAAFSEVIHACAAPRHEGGGTWILPEMAEAYQCLHHMGY HHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHCCC AHSVEAWHEGELVGGLYGVGLGRAFFGESMFHVLPEASRAALAGLVALLRLRGVTLLDCQ CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC QETPHIMKMGGVLLPRELFVQKLDQALAPEHPAGTLYRHGSAVDPFSGSTSTDVEQTAVC CCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH GAIWQPWHERYDYSLSSGSWALRS HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAQFPPLEAARKDGLLCFGGDLHPERLLAAYSRGIFPWYEAGLPILWWSPDPRCVLPLD CCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEEECH AFHLPRRSARHLRNKPFELTLNAAFSEVIHACAAPRHEGGGTWILPEMAEAYQCLHHMGY HHHCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHCCC AHSVEAWHEGELVGGLYGVGLGRAFFGESMFHVLPEASRAALAGLVALLRLRGVTLLDCQ CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECC QETPHIMKMGGVLLPRELFVQKLDQALAPEHPAGTLYRHGSAVDPFSGSTSTDVEQTAVC CCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH GAIWQPWHERYDYSLSSGSWALRS HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA