| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904683
Identifier: 220904683
GI number: 220904683
Start: 1693222
End: 1694046
Strand: Direct
Name: 220904683
Synonym: Ddes_1415
Alternate gene names: NA
Gene position: 1693222-1694046 (Clockwise)
Preceding gene: 220904682
Following gene: 220904684
Centisome position: 58.93
GC content: 57.21
Gene sequence:
>825_bases ATGAGCATAACCCTTTACACCGCACCCGACTGCATCCGCTGCAGGATCGTCAAAAGCTTTCTTGCGGAACGCGGGCTGGA GTATGCCACAGTAGACTTCAAAGCCGATGCGCAAACCTTCAACGCCTTCTACCGCGCCAACCGCAAGGCCATTTACCGCA ATCCTGAAGGTGTGGAATTTCCTCTGTTTGACGACGGCAAAGTCATTAAACAAGGCTCCGGTGAAATTATTGCCTATCTG CTTTCCGGCCATGACATGGAATGCTGCGTGACCAGAAGCGATATGCTTCACGGTAAAATTGCGGGAATTTATCCCTCCCT TTGCCCTGACGGGCAGGAGGAAAACCTGCTCATACTCGTTGACCGCCTTGCCAAGGGCGGCCTGCAGGTCTGGCTGCAGG TGGATGGACGCAAGCCGGCTCTGCTGGAAAAGCTGCTGCACATCAAGGATGTTCATGTCATCCTTAATGTTGTGGGCGGA GCCGATGCCGCTGGCCGTATCTTCGGCGGCGCCCCCTCGAAAGAAGACCTGGCGAAAACCATAGCTCTCGTGCAGGCATC TCCGGACGGCATCATCCGTTTTCTGGCGGTTCCCCACCCTGCTGATGGCGGCCAGTGGGCATGGCCTCAACGGGCCGATG CAGCAGCAGCAGCGCAAATGGTGGCCGAAGCCTGCGGCCAGCCCACCCTGCCCTATGTCATCACCGCCATCACGCCCGAT ATGGCTTGGGACATGCGTGGTCTGGACGCCCTGCCCGAGCAGAACATGCTCGTCTACCGTTCCGCCTCACGGCAGTTTCT TTTCAAAGCTGATATCGCGAAATAG
Upstream 100 bases:
>100_bases AACAATTGCATAAACCTTCCTGAGGCCGCGGCGCGAGCAGATGCGTAAAGCCTGCCCGCGCCGCGCGGCCTTTAACGGTA AACCGCCAAGGAGTATTGCC
Downstream 100 bases:
>100_bases GGGGCAGACGTGCAGTCTTTTGACGTGATCATCATAGGTGGAGGCCCGGGCGGAACCACGGCAGCCCGCATTCTGGCACA GGGCGGGAAAAAAGTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSITLYTAPDCIRCRIVKSFLAERGLEYATVDFKADAQTFNAFYRANRKAIYRNPEGVEFPLFDDGKVIKQGSGEIIAYL LSGHDMECCVTRSDMLHGKIAGIYPSLCPDGQEENLLILVDRLAKGGLQVWLQVDGRKPALLEKLLHIKDVHVILNVVGG ADAAGRIFGGAPSKEDLAKTIALVQASPDGIIRFLAVPHPADGGQWAWPQRADAAAAAQMVAEACGQPTLPYVITAITPD MAWDMRGLDALPEQNMLVYRSASRQFLFKADIAK
Sequences:
>Translated_274_residues MSITLYTAPDCIRCRIVKSFLAERGLEYATVDFKADAQTFNAFYRANRKAIYRNPEGVEFPLFDDGKVIKQGSGEIIAYL LSGHDMECCVTRSDMLHGKIAGIYPSLCPDGQEENLLILVDRLAKGGLQVWLQVDGRKPALLEKLLHIKDVHVILNVVGG ADAAGRIFGGAPSKEDLAKTIALVQASPDGIIRFLAVPHPADGGQWAWPQRADAAAAAQMVAEACGQPTLPYVITAITPD MAWDMRGLDALPEQNMLVYRSASRQFLFKADIAK >Mature_273_residues SITLYTAPDCIRCRIVKSFLAERGLEYATVDFKADAQTFNAFYRANRKAIYRNPEGVEFPLFDDGKVIKQGSGEIIAYLL SGHDMECCVTRSDMLHGKIAGIYPSLCPDGQEENLLILVDRLAKGGLQVWLQVDGRKPALLEKLLHIKDVHVILNVVGGA DAAGRIFGGAPSKEDLAKTIALVQASPDGIIRFLAVPHPADGGQWAWPQRADAAAAAQMVAEACGQPTLPYVITAITPDM AWDMRGLDALPEQNMLVYRSASRQFLFKADIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29916; Mature: 29785
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITLYTAPDCIRCRIVKSFLAERGLEYATVDFKADAQTFNAFYRANRKAIYRNPEGVEF CEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCEEEEECCCCCCC PLFDDGKVIKQGSGEIIAYLLSGHDMECCVTRSDMLHGKIAGIYPSLCPDGQEENLLILV CCCCCCCEEECCCCEEEEEEECCCCCEEEEEHHHHHCCCHHCCCCCCCCCCCCCCEEEEE DRLAKGGLQVWLQVDGRKPALLEKLLHIKDVHVILNVVGGADAAGRIFGGAPSKEDLAKT EHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEHHCCCCCCCCEECCCCCHHHHHHH IALVQASPDGIIRFLAVPHPADGGQWAWPQRADAAAAAQMVAEACGQPTLPYVITAITPD HHHEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC MAWDMRGLDALPEQNMLVYRSASRQFLFKADIAK HHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCC >Mature Secondary Structure SITLYTAPDCIRCRIVKSFLAERGLEYATVDFKADAQTFNAFYRANRKAIYRNPEGVEF EEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCEEEEECCCCCCC PLFDDGKVIKQGSGEIIAYLLSGHDMECCVTRSDMLHGKIAGIYPSLCPDGQEENLLILV CCCCCCCEEECCCCEEEEEEECCCCCEEEEEHHHHHCCCHHCCCCCCCCCCCCCCEEEEE DRLAKGGLQVWLQVDGRKPALLEKLLHIKDVHVILNVVGGADAAGRIFGGAPSKEDLAKT EHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEHHCCCCCCCCEECCCCCHHHHHHH IALVQASPDGIIRFLAVPHPADGGQWAWPQRADAAAAAQMVAEACGQPTLPYVITAITPD HHHEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC MAWDMRGLDALPEQNMLVYRSASRQFLFKADIAK HHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA