| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904680
Identifier: 220904680
GI number: 220904680
Start: 1688027
End: 1689475
Strand: Direct
Name: 220904680
Synonym: Ddes_1412
Alternate gene names: NA
Gene position: 1688027-1689475 (Clockwise)
Preceding gene: 220904678
Following gene: 220904682
Centisome position: 58.75
GC content: 58.11
Gene sequence:
>1449_bases ATGGGCCACCCGACTATCTACCCTACCGGTGTCACGGTTTACAACCCTGAAAAAGCCTGGAGCGGCTTTACGATCATTCA GGCTCCCGACAACGGCGCGCTGCTGCTGGGCATGAACGGCCACGAAATCCGCATGTGGAAAGACGTGCACGGTTTCCCCA ACAAAATGTTCCCCGGCGGCATGCTTATGGGCAGCACCGGCACCCGCCACCCCAAGCATGGCCTCCAGGACCAGCTTGAC CTCGTGCAGATCGACTGGGACGGCAATATAGTATGGAAATTTGACCGCGCAGAATTCATCGAAGATCCGGGCATGGAAGG GCGATGGATGGCCCGCCAGCACCACGACTTCCAGCGCGAAGGCAGCTCCACCGGCTATTACGCGCCCGGGCAGGAACCCA AGATTGACTCCGGCAATACGCTGGTCCTTTGCCATAAAAACACCGTCAATCCCTACATCAGCGACAAAATGCTGGTTGAT GACGTCATCTATGAAGTAACATGGGACGGCGACATTGTATGGGAATGGAACTGCGCCGACCACGTTGAAGAAATGGGCTT TACCGAAGCCGCCCGCAACGCCATGTGCCGTGACCCCAACTTCCGCGGTGGAACCATTATGGAAAACGCCCCCGGCGTGG GTGACTGGATGCATGTCAACTCCATGTCCACCCTTGGCCCCAACAAATGGTTTGATGCCGGTGATGCGCGCTTCCACCCC GACAATATCATCATTGACGGCCGTGAAACCAATATCATCCTGATTCTTGACAAAAAGACCGGTAAAATCGTCTGGCAGCT CGGCCCGGACTACGACCGCACCCCCGAAGAAAAAGCCATCGGCTGGATTATCGGCCAGCACCATGCCCACATGATCCCCC GGGGACTGCCGGGCGAGGGCAATATCCTTGTATATGACAATGGCGGATGGGGCGGTTACGGCAATCCCAACCCCGGTGCC CCCCGTGGCGTCAAGGCCGCCCAGCGCGACTATTCCCGCGTGCTCGAGATCGACCCCGTGGCCATGAAGATTGTGTGGCA GTACACGCCGCATGAAGCGGGCTTTCTTGTTCCCCTGGACGCCTACCGCTTTTACAGCCCCTTCATCAGTTCGGCCCAGC GCCTGCCCAACGGCAACACCCTCATCTGCGAAGGTTCCGATGGACGCGTATTTGAAGTGACGGCCGAACACGAAATAGTG TGGGAATACATCTGCCCCTACAAGGGGCACATCAGCCTGCCCATGAACTGGGTGTACCGCGCCTATCGGTTGCCCTATTC CTGGGTTCCCCAGGCTGAGGTGCCAGAAGAAAAAGCTATTGAACCTCTGGCGGTTAAAGACTTCCGCGTGCCTGGGGCTG CCCCCTTCGGTCCTATGTCTACCGTCAAGGTTGAAGGCACTGTCGGCTACTACAGCGGCGCTGGACACTGCGTGGCCGCC ACCGAATAA
Upstream 100 bases:
>100_bases CTCCAAGGGCTACCATGCATTTTACCGACTCTCTGTCCGCATCAGCCAAGGCAATACGGCCAGATTGTGCAAAAAAACGC CCGACCAAAAGGAGGTTCTT
Downstream 100 bases:
>100_bases ACAGCATCGTTTCGCCACCCTCTCCATGACCATGAGGCCCCGGAATCTGCCGCCGGGGCCTCATGGCTTTTCTGCGGCAT GCCGCAATACTCCCTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MGHPTIYPTGVTVYNPEKAWSGFTIIQAPDNGALLLGMNGHEIRMWKDVHGFPNKMFPGGMLMGSTGTRHPKHGLQDQLD LVQIDWDGNIVWKFDRAEFIEDPGMEGRWMARQHHDFQREGSSTGYYAPGQEPKIDSGNTLVLCHKNTVNPYISDKMLVD DVIYEVTWDGDIVWEWNCADHVEEMGFTEAARNAMCRDPNFRGGTIMENAPGVGDWMHVNSMSTLGPNKWFDAGDARFHP DNIIIDGRETNIILILDKKTGKIVWQLGPDYDRTPEEKAIGWIIGQHHAHMIPRGLPGEGNILVYDNGGWGGYGNPNPGA PRGVKAAQRDYSRVLEIDPVAMKIVWQYTPHEAGFLVPLDAYRFYSPFISSAQRLPNGNTLICEGSDGRVFEVTAEHEIV WEYICPYKGHISLPMNWVYRAYRLPYSWVPQAEVPEEKAIEPLAVKDFRVPGAAPFGPMSTVKVEGTVGYYSGAGHCVAA TE
Sequences:
>Translated_482_residues MGHPTIYPTGVTVYNPEKAWSGFTIIQAPDNGALLLGMNGHEIRMWKDVHGFPNKMFPGGMLMGSTGTRHPKHGLQDQLD LVQIDWDGNIVWKFDRAEFIEDPGMEGRWMARQHHDFQREGSSTGYYAPGQEPKIDSGNTLVLCHKNTVNPYISDKMLVD DVIYEVTWDGDIVWEWNCADHVEEMGFTEAARNAMCRDPNFRGGTIMENAPGVGDWMHVNSMSTLGPNKWFDAGDARFHP DNIIIDGRETNIILILDKKTGKIVWQLGPDYDRTPEEKAIGWIIGQHHAHMIPRGLPGEGNILVYDNGGWGGYGNPNPGA PRGVKAAQRDYSRVLEIDPVAMKIVWQYTPHEAGFLVPLDAYRFYSPFISSAQRLPNGNTLICEGSDGRVFEVTAEHEIV WEYICPYKGHISLPMNWVYRAYRLPYSWVPQAEVPEEKAIEPLAVKDFRVPGAAPFGPMSTVKVEGTVGYYSGAGHCVAA TE >Mature_481_residues GHPTIYPTGVTVYNPEKAWSGFTIIQAPDNGALLLGMNGHEIRMWKDVHGFPNKMFPGGMLMGSTGTRHPKHGLQDQLDL VQIDWDGNIVWKFDRAEFIEDPGMEGRWMARQHHDFQREGSSTGYYAPGQEPKIDSGNTLVLCHKNTVNPYISDKMLVDD VIYEVTWDGDIVWEWNCADHVEEMGFTEAARNAMCRDPNFRGGTIMENAPGVGDWMHVNSMSTLGPNKWFDAGDARFHPD NIIIDGRETNIILILDKKTGKIVWQLGPDYDRTPEEKAIGWIIGQHHAHMIPRGLPGEGNILVYDNGGWGGYGNPNPGAP RGVKAAQRDYSRVLEIDPVAMKIVWQYTPHEAGFLVPLDAYRFYSPFISSAQRLPNGNTLICEGSDGRVFEVTAEHEIVW EYICPYKGHISLPMNWVYRAYRLPYSWVPQAEVPEEKAIEPLAVKDFRVPGAAPFGPMSTVKVEGTVGYYSGAGHCVAAT E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53962; Mature: 53830
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHPTIYPTGVTVYNPEKAWSGFTIIQAPDNGALLLGMNGHEIRMWKDVHGFPNKMFPGG CCCCCEEECCEEEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCC MLMGSTGTRHPKHGLQDQLDLVQIDWDGNIVWKFDRAEFIEDPGMEGRWMARQHHDFQRE EEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHCCCCCCCEEEHHHHCHHHHC GSSTGYYAPGQEPKIDSGNTLVLCHKNTVNPYISDKMLVDDVIYEVTWDGDIVWEWNCAD CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEEECHHH HVEEMGFTEAARNAMCRDPNFRGGTIMENAPGVGDWMHVNSMSTLGPNKWFDAGDARFHP HHHHCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECC DNIIIDGRETNIILILDKKTGKIVWQLGPDYDRTPEEKAIGWIIGQHHAHMIPRGLPGEG CCEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHEEEEEEECCCHHCCCCCCCCCC NILVYDNGGWGGYGNPNPGAPRGVKAAQRDYSRVLEIDPVAMKIVWQYTPHEAGFLVPLD CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEEEH AYRFYSPFISSAQRLPNGNTLICEGSDGRVFEVTAEHEIVWEYICPYKGHISLPMNWVYR HHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCEEECCHHHHHH AYRLPYSWVPQAEVPEEKAIEPLAVKDFRVPGAAPFGPMSTVKVEGTVGYYSGAGHCVAA HHCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEEE TE CC >Mature Secondary Structure GHPTIYPTGVTVYNPEKAWSGFTIIQAPDNGALLLGMNGHEIRMWKDVHGFPNKMFPGG CCCCEEECCEEEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCC MLMGSTGTRHPKHGLQDQLDLVQIDWDGNIVWKFDRAEFIEDPGMEGRWMARQHHDFQRE EEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHCCCCCCCEEEHHHHCHHHHC GSSTGYYAPGQEPKIDSGNTLVLCHKNTVNPYISDKMLVDDVIYEVTWDGDIVWEWNCAD CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEEECHHH HVEEMGFTEAARNAMCRDPNFRGGTIMENAPGVGDWMHVNSMSTLGPNKWFDAGDARFHP HHHHCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECC DNIIIDGRETNIILILDKKTGKIVWQLGPDYDRTPEEKAIGWIIGQHHAHMIPRGLPGEG CCEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHEEEEEEECCCHHCCCCCCCCCC NILVYDNGGWGGYGNPNPGAPRGVKAAQRDYSRVLEIDPVAMKIVWQYTPHEAGFLVPLD CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEEEEECCCCCCEEEEEH AYRFYSPFISSAQRLPNGNTLICEGSDGRVFEVTAEHEIVWEYICPYKGHISLPMNWVYR HHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCEEECCHHHHHH AYRLPYSWVPQAEVPEEKAIEPLAVKDFRVPGAAPFGPMSTVKVEGTVGYYSGAGHCVAA HHCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEEE TE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA