| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904630
Identifier: 220904630
GI number: 220904630
Start: 1637679
End: 1638362
Strand: Direct
Name: 220904630
Synonym: Ddes_1362
Alternate gene names: NA
Gene position: 1637679-1638362 (Clockwise)
Preceding gene: 220904629
Following gene: 220904631
Centisome position: 56.99
GC content: 60.09
Gene sequence:
>684_bases ATGAATACTCAAGTGATGAACGAGCAAGCTCTTAAAGATCTTCTGGCTGGCGTGGTCCGCAAGGTGCTGACACAGGAATG CGGCGAATCTGCCGCTACCGCCATGAACGCCGGGCCTATTCCGGTGGAAATTTCAGCCCGTCACGCTCATTTGAGCGTGT CAGACGCGCTTACCCTCTTCGGCGAGGCTCTACGGCCCGACAGGCCGCTTTCCCAGCCGGGGCAGTTTCTGAGCACGGGG CGCGTGCGTCTTATCGGCCCCAAGGGCGTTATGGACAATGTGGCCGTACTCGGCCCCGCCCGCGATGTTTCCCAGGTAGA AATATCCCGGACGGACGCCCGCGCTCTGGGCATCAATCCGCCTGTTCGCCAAAGCGGCGACATTAAAGACACGCCGGGCA TCATTCTGGCTTCGGCCACAGGGATTGTTGGTCTGGACTGCGGCGTCATCGTGGCTTCACGCCACATTCACATGCATACA GACGATGCCCGCCGCTTCGGACTCAAGGACAAGGACATGGTCGACGTGCGGCTTGATACCGAACGCCCCATGATTCTGGA AAACGTGCTGGTGCGCGTCAGCGACAACTTCAAGCTGGCTATGCACATCGATGCCGACGAAGGCAACAGCGCGGGCTGGA AGCCCGGCGCCACCGGCATGATCATCGGACTGAGCAGAGGTTAG
Upstream 100 bases:
>100_bases ATGATCCTGCCCAAGCGCGAAGCCTAACCCATACCCACGACACGAGTCCGGCGGCGATGCGGCATCCCTACCCCGCCCGC CGCCGGACAGTGGAGCCGAG
Downstream 100 bases:
>100_bases CAATGGACTTTACCGCCGCTGACAAGCTTATGGACACCCTGGAAAAATGCCGCAAAAAACCCCGCAAGGTCACTGCCACG GAGCCGCTCTATGTGGGCGT
Product: Propanediol utilization protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNTQVMNEQALKDLLAGVVRKVLTQECGESAATAMNAGPIPVEISARHAHLSVSDALTLFGEALRPDRPLSQPGQFLSTG RVRLIGPKGVMDNVAVLGPARDVSQVEISRTDARALGINPPVRQSGDIKDTPGIILASATGIVGLDCGVIVASRHIHMHT DDARRFGLKDKDMVDVRLDTERPMILENVLVRVSDNFKLAMHIDADEGNSAGWKPGATGMIIGLSRG
Sequences:
>Translated_227_residues MNTQVMNEQALKDLLAGVVRKVLTQECGESAATAMNAGPIPVEISARHAHLSVSDALTLFGEALRPDRPLSQPGQFLSTG RVRLIGPKGVMDNVAVLGPARDVSQVEISRTDARALGINPPVRQSGDIKDTPGIILASATGIVGLDCGVIVASRHIHMHT DDARRFGLKDKDMVDVRLDTERPMILENVLVRVSDNFKLAMHIDADEGNSAGWKPGATGMIIGLSRG >Mature_227_residues MNTQVMNEQALKDLLAGVVRKVLTQECGESAATAMNAGPIPVEISARHAHLSVSDALTLFGEALRPDRPLSQPGQFLSTG RVRLIGPKGVMDNVAVLGPARDVSQVEISRTDARALGINPPVRQSGDIKDTPGIILASATGIVGLDCGVIVASRHIHMHT DDARRFGLKDKDMVDVRLDTERPMILENVLVRVSDNFKLAMHIDADEGNSAGWKPGATGMIIGLSRG
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24198; Mature: 24198
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQVMNEQALKDLLAGVVRKVLTQECGESAATAMNAGPIPVEISARHAHLSVSDALTLF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCEEEEEHHHHHHHH GEALRPDRPLSQPGQFLSTGRVRLIGPKGVMDNVAVLGPARDVSQVEISRTDARALGINP HHHCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEEEECCCCCCCEEEEECCCCEEECCCC PVRQSGDIKDTPGIILASATGIVGLDCGVIVASRHIHMHTDDARRFGLKDKDMVDVRLDT CCCCCCCCCCCCCEEEEECCCEEECCCCEEEEECEEEEECCHHHHCCCCCCCEEEEEECC ERPMILENVLVRVSDNFKLAMHIDADEGNSAGWKPGATGMIIGLSRG CCCHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MNTQVMNEQALKDLLAGVVRKVLTQECGESAATAMNAGPIPVEISARHAHLSVSDALTLF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCEEEEEHHHHHHHH GEALRPDRPLSQPGQFLSTGRVRLIGPKGVMDNVAVLGPARDVSQVEISRTDARALGINP HHHCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEEEECCCCCCCEEEEECCCCEEECCCC PVRQSGDIKDTPGIILASATGIVGLDCGVIVASRHIHMHTDDARRFGLKDKDMVDVRLDT CCCCCCCCCCCCCEEEEECCCEEECCCCEEEEECEEEEECCHHHHCCCCCCCEEEEEECC ERPMILENVLVRVSDNFKLAMHIDADEGNSAGWKPGATGMIIGLSRG CCCHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA