| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904580
Identifier: 220904580
GI number: 220904580
Start: 1555658
End: 1556968
Strand: Direct
Name: 220904580
Synonym: Ddes_1312
Alternate gene names: NA
Gene position: 1555658-1556968 (Clockwise)
Preceding gene: 220904579
Following gene: 220904581
Centisome position: 54.14
GC content: 59.88
Gene sequence:
>1311_bases ATGAGCATACGTATAGCTGTAAGCATGCGTGGCCCCATGCGGGCGCTTGCCAGTCAGGGCATACTCGCCACAGATTGCCA CGCCCAACTCAAAGCCATACTGCTGCAAAAGCTGGGTCCGGAACATGCCGCCCTGCTGGCTGAGCCGCAACATGATGCCG AAGGCAGCAGCGTGGACTGGTATGCTGAAGGGCAAGGCCCCGCGATTGCCCTTAAAGATCTTCCGGAAGAAGATGCCAAT ACCCTGCGCGCCAGGGCGACCTCTCTGGCCAATGATATCGCCGCTCTCTCAGGTACGCTTACTTCTGATGCACAGGCCCG CCAAGCGCTCTCGGGCCAGTTGCTGCGTCTTGCCCTGCAACACCCATCGGATGGTGATATCTGGTCTGTGAACGGGCAGC CTGTACTTGTCAACTGGGGCTTTGCCCCAGGCAGTGCAGGAGCCTTGCCTCAGGACCTGACCCGACTGGGCGCTGCACTG CCCCCGCCGCCAGTGCCACCTGTTCCCGCCCCGGCAGCCGGAGCGGGCTGCCTGCCCTGGCTCTTGCCCCTGCTTCTGCT TTTGCTTTTACTCTGGCTTCTCGGTGCGGCACTGGGTCTTTTCCCCTCCCCCCTGCCTGCGGGCTGCCTGCCTGTGGACC GCAAAAATCTTGTGGCCGAAGAACAGCGAGCTGCGGCTCTGGATGACGAACTGGCGCTCTTGTGGAGCCAGCTTTTGGAG CGGGCAGCGCTGTGCAAACCCGTAAAACCTGCTCCCGTCCAGGAAGAAAAGGAAGAGCCGGTGGCCCCCCTGCCGGAACC TGAAATAGTAGAGCCATTCCTGGGTGAGACCCCACCGGCACCCAAGCCTGTGCCGCAGCCCAAACCGGAAAAACCCAAGG AACAGCCCAAACCTGTGGAGCCTCCCAGGCAACCGGAAAAACCCAAGAAAAAAAACGAGGACCTGACCATCCCGCAGGAT GCCGCCAAAAAGAACGATCTGAGTTTTCTTGAAGGCTGCTGGACCAGCGAAACCGGCCTGTATTCGCACCCGTCCAACGA GCCTATTGTGGCGGAGTACTGCTTTGATAAAAAAGGCAAGGGCCGCCGCTTTGTGCGCGAGCGCAACGGGCAGGTCTGCA GCGGGTCCGCAAATGCCCGTTTTCAGGGCAACAGGCTGAATTTTGAATCCGACCAGGCCAGATGCCCCCGTGGCGGCACA TATGTTCCCCAAAAGGTGGAATGCACCGGCAGTGAAAACACAACCCAGTGCAAGGGCAGAGAACTGGGCGCGGGCAATAA TAAATGGGACGCCCGCTTCAGAAGGAAATAA
Upstream 100 bases:
>100_bases CTGCGCCCACGGCATCAGGTCAGGAGAAATCCTCCGTGCCGGAACAGACGGCACAAAAAGGCGCCGCCCAGGCCGCCGGA AACGAGCAGGGAGGCAAGCC
Downstream 100 bases:
>100_bases GCATGAACGTCATACCCCGTTATCTTTCCCCTGTGAGCATCATTCCCGGTGGTTGCCCACAGTTTCTGGATTTTGCCCTG CAGGAGGAATCCATACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSIRIAVSMRGPMRALASQGILATDCHAQLKAILLQKLGPEHAALLAEPQHDAEGSSVDWYAEGQGPAIALKDLPEEDAN TLRARATSLANDIAALSGTLTSDAQARQALSGQLLRLALQHPSDGDIWSVNGQPVLVNWGFAPGSAGALPQDLTRLGAAL PPPPVPPVPAPAAGAGCLPWLLPLLLLLLLLWLLGAALGLFPSPLPAGCLPVDRKNLVAEEQRAAALDDELALLWSQLLE RAALCKPVKPAPVQEEKEEPVAPLPEPEIVEPFLGETPPAPKPVPQPKPEKPKEQPKPVEPPRQPEKPKKKNEDLTIPQD AAKKNDLSFLEGCWTSETGLYSHPSNEPIVAEYCFDKKGKGRRFVRERNGQVCSGSANARFQGNRLNFESDQARCPRGGT YVPQKVECTGSENTTQCKGRELGAGNNKWDARFRRK
Sequences:
>Translated_436_residues MSIRIAVSMRGPMRALASQGILATDCHAQLKAILLQKLGPEHAALLAEPQHDAEGSSVDWYAEGQGPAIALKDLPEEDAN TLRARATSLANDIAALSGTLTSDAQARQALSGQLLRLALQHPSDGDIWSVNGQPVLVNWGFAPGSAGALPQDLTRLGAAL PPPPVPPVPAPAAGAGCLPWLLPLLLLLLLLWLLGAALGLFPSPLPAGCLPVDRKNLVAEEQRAAALDDELALLWSQLLE RAALCKPVKPAPVQEEKEEPVAPLPEPEIVEPFLGETPPAPKPVPQPKPEKPKEQPKPVEPPRQPEKPKKKNEDLTIPQD AAKKNDLSFLEGCWTSETGLYSHPSNEPIVAEYCFDKKGKGRRFVRERNGQVCSGSANARFQGNRLNFESDQARCPRGGT YVPQKVECTGSENTTQCKGRELGAGNNKWDARFRRK >Mature_435_residues SIRIAVSMRGPMRALASQGILATDCHAQLKAILLQKLGPEHAALLAEPQHDAEGSSVDWYAEGQGPAIALKDLPEEDANT LRARATSLANDIAALSGTLTSDAQARQALSGQLLRLALQHPSDGDIWSVNGQPVLVNWGFAPGSAGALPQDLTRLGAALP PPPVPPVPAPAAGAGCLPWLLPLLLLLLLLWLLGAALGLFPSPLPAGCLPVDRKNLVAEEQRAAALDDELALLWSQLLER AALCKPVKPAPVQEEKEEPVAPLPEPEIVEPFLGETPPAPKPVPQPKPEKPKEQPKPVEPPRQPEKPKKKNEDLTIPQDA AKKNDLSFLEGCWTSETGLYSHPSNEPIVAEYCFDKKGKGRRFVRERNGQVCSGSANARFQGNRLNFESDQARCPRGGTY VPQKVECTGSENTTQCKGRELGAGNNKWDARFRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46927; Mature: 46796
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRIAVSMRGPMRALASQGILATDCHAQLKAILLQKLGPEHAALLAEPQHDAEGSSVDW CEEEEEEECCCHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCEEE YAEGQGPAIALKDLPEEDANTLRARATSLANDIAALSGTLTSDAQARQALSGQLLRLALQ EECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC HPSDGDIWSVNGQPVLVNWGFAPGSAGALPQDLTRLGAALPPPPVPPVPAPAAGAGCLPW CCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LLPLLLLLLLLWLLGAALGLFPSPLPAGCLPVDRKNLVAEEQRAAALDDELALLWSQLLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAALCKPVKPAPVQEEKEEPVAPLPEPEIVEPFLGETPPAPKPVPQPKPEKPKEQPKPVE HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PPRQPEKPKKKNEDLTIPQDAAKKNDLSFLEGCWTSETGLYSHPSNEPIVAEYCFDKKGK CCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC GRRFVRERNGQVCSGSANARFQGNRLNFESDQARCPRGGTYVPQKVECTGSENTTQCKGR CHHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ELGAGNNKWDARFRRK CCCCCCCCCCCCCCCC >Mature Secondary Structure SIRIAVSMRGPMRALASQGILATDCHAQLKAILLQKLGPEHAALLAEPQHDAEGSSVDW EEEEEEECCCHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCEEE YAEGQGPAIALKDLPEEDANTLRARATSLANDIAALSGTLTSDAQARQALSGQLLRLALQ EECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC HPSDGDIWSVNGQPVLVNWGFAPGSAGALPQDLTRLGAALPPPPVPPVPAPAAGAGCLPW CCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LLPLLLLLLLLWLLGAALGLFPSPLPAGCLPVDRKNLVAEEQRAAALDDELALLWSQLLE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RAALCKPVKPAPVQEEKEEPVAPLPEPEIVEPFLGETPPAPKPVPQPKPEKPKEQPKPVE HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PPRQPEKPKKKNEDLTIPQDAAKKNDLSFLEGCWTSETGLYSHPSNEPIVAEYCFDKKGK CCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC GRRFVRERNGQVCSGSANARFQGNRLNFESDQARCPRGGTYVPQKVECTGSENTTQCKGR CHHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC ELGAGNNKWDARFRRK CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA