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The map label for this gene is degQ [C]

Identifier: 220904579

GI number: 220904579

Start: 1554501

End: 1555661

Strand: Direct

Name: degQ [C]

Synonym: Ddes_1311

Alternate gene names: 220904579

Gene position: 1554501-1555661 (Clockwise)

Preceding gene: 220904578

Following gene: 220904580

Centisome position: 54.1

GC content: 62.02

Gene sequence:

>1161_bases
ATGAGTCAAACGCCCAATCCAGCCCCACCGGGGCAGTCCGCGCCATCGGAAGCTCCGGAGGCCCCCCCGCAGCCCTGGTT
CCGGCGTCCCTTTTTCTGGGGACTGCTGCTCTTTCTGGCTCTGCTGCTTCTCGCCGCATGGCTTTTTGGGAAGCAGTGGC
AGGAAGCTGAAAGCCGCAAGGCAGAGGCGGCAGCGCAACTTGCCGAACTGCAACTGCAAAACCAGGCCCGACAGGATTTT
ATTGAAAAGCTGCGCCTGCTTCTCAAGGAAGAGCCGTGTGAGGTGCAGCGCCGCCTTCCTCTTTTGCCCCCCCCCGCCGG
TGTGGCCTGGCCGCCTCTGCCCGATTCCGCCACAGGAGCCGGAGGCGTAGCCGCCCCCCCCAACGCTGCACCAGCACAGT
CGCGGAGCACTCGTCCGGTGTCGCCGCCCCAAGACTTTGCCGCCCTTATGGAACAGGCCACGGTACTTGTTCTGGCCATG
CAGCCCGAGGGGCTTTCTATGGGATCGGGCTTTTTTGTAACTTCGGGACATGTGGTAACCAACGCGCACGTGGTTGGCCC
TGCGGGCAAGGCCGTCATTGTCAGCAAAGCCACAGGCGCGCCCCTTGCTGCCCGTGTTCTGCAGGCAACGCAAAGCGCGG
GACGTGACTTTGCGGTGCTTGCCGTCGAAAATGGCCCGGGCATCACGCCACTCCCGCTAACCACTGAAGTCTGGCGCACG
GAAAAAGTCAGCGCATGGGGCTTTCCCGGGGCCGTGACCAACGATGACCCCAAATTTCTGGCCCTGCTCAAGGGTAATGA
CGCGGCAGCGCCCGAGGTGGTTTATACCGAAGGTGTGGTCAGCGTCATACTTGAACGCAACCCGCCCCTCATTGTGCATA
CGGCTACCGTGTCACAGGGCAACAGCGGCGGACCGCTGGTCAACGACAAGGGCGAAGTGGTCGGAATCAATACGTTCATC
AAGCTGGACGACGGATCTTACAGGCAGTCCAGCCTGGCTATTGTAAGTGCCAGCCTTGCGGATTTTCTGCGTGCTGCGGG
AGTTCCCTTTACTCTTGCTGCGCCCACGGCATCAGGTCAGGAGAAATCCTCCGTGCCGGAACAGACGGCACAAAAAGGCG
CCGCCCAGGCCGCCGGAAACGAGCAGGGAGGCAAGCCATGA

Upstream 100 bases:

>100_bases
TGTAAATAACCTGCTTGGATAATTTCATGTTTGCGCTGCCTCTTGATTTGCTCCAGAGGCAGCGCAAACATTTCCCTGCG
GTTTTTTCCGCGGAGTTGCC

Downstream 100 bases:

>100_bases
GCATACGTATAGCTGTAAGCATGCGTGGCCCCATGCGGGCGCTTGCCAGTCAGGGCATACTCGCCACAGATTGCCACGCC
CAACTCAAAGCCATACTGCT

Product: peptidase S1 and S6 chymotrypsin/Hap

Products: NA

Alternate protein names: Serine Protease; Periplasmic Serine Proteinase; Trypsin-Like Serine Protease; Protease/Peptidase; S1/S6 Family Peptidase; Protease

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSQTPNPAPPGQSAPSEAPEAPPQPWFRRPFFWGLLLFLALLLLAAWLFGKQWQEAESRKAEAAAQLAELQLQNQARQDF
IEKLRLLLKEEPCEVQRRLPLLPPPAGVAWPPLPDSATGAGGVAAPPNAAPAQSRSTRPVSPPQDFAALMEQATVLVLAM
QPEGLSMGSGFFVTSGHVVTNAHVVGPAGKAVIVSKATGAPLAARVLQATQSAGRDFAVLAVENGPGITPLPLTTEVWRT
EKVSAWGFPGAVTNDDPKFLALLKGNDAAAPEVVYTEGVVSVILERNPPLIVHTATVSQGNSGGPLVNDKGEVVGINTFI
KLDDGSYRQSSLAIVSASLADFLRAAGVPFTLAAPTASGQEKSSVPEQTAQKGAAQAAGNEQGGKP

Sequences:

>Translated_386_residues
MSQTPNPAPPGQSAPSEAPEAPPQPWFRRPFFWGLLLFLALLLLAAWLFGKQWQEAESRKAEAAAQLAELQLQNQARQDF
IEKLRLLLKEEPCEVQRRLPLLPPPAGVAWPPLPDSATGAGGVAAPPNAAPAQSRSTRPVSPPQDFAALMEQATVLVLAM
QPEGLSMGSGFFVTSGHVVTNAHVVGPAGKAVIVSKATGAPLAARVLQATQSAGRDFAVLAVENGPGITPLPLTTEVWRT
EKVSAWGFPGAVTNDDPKFLALLKGNDAAAPEVVYTEGVVSVILERNPPLIVHTATVSQGNSGGPLVNDKGEVVGINTFI
KLDDGSYRQSSLAIVSASLADFLRAAGVPFTLAAPTASGQEKSSVPEQTAQKGAAQAAGNEQGGKP
>Mature_385_residues
SQTPNPAPPGQSAPSEAPEAPPQPWFRRPFFWGLLLFLALLLLAAWLFGKQWQEAESRKAEAAAQLAELQLQNQARQDFI
EKLRLLLKEEPCEVQRRLPLLPPPAGVAWPPLPDSATGAGGVAAPPNAAPAQSRSTRPVSPPQDFAALMEQATVLVLAMQ
PEGLSMGSGFFVTSGHVVTNAHVVGPAGKAVIVSKATGAPLAARVLQATQSAGRDFAVLAVENGPGITPLPLTTEVWRTE
KVSAWGFPGAVTNDDPKFLALLKGNDAAAPEVVYTEGVVSVILERNPPLIVHTATVSQGNSGGPLVNDKGEVVGINTFIK
LDDGSYRQSSLAIVSASLADFLRAAGVPFTLAAPTASGQEKSSVPEQTAQKGAAQAAGNEQGGKP

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40276; Mature: 40145

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTPNPAPPGQSAPSEAPEAPPQPWFRRPFFWGLLLFLALLLLAAWLFGKQWQEAESRK
CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AEAAAQLAELQLQNQARQDFIEKLRLLLKEEPCEVQRRLPLLPPPAGVAWPPLPDSATGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GGVAAPPNAAPAQSRSTRPVSPPQDFAALMEQATVLVLAMQPEGLSMGSGFFVTSGHVVT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCEEEE
NAHVVGPAGKAVIVSKATGAPLAARVLQATQSAGRDFAVLAVENGPGITPLPLTTEVWRT
EEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCC
EKVSAWGFPGAVTNDDPKFLALLKGNDAAAPEVVYTEGVVSVILERNPPLIVHTATVSQG
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHEECCCCCEEEEEEEECCC
NSGGPLVNDKGEVVGINTFIKLDDGSYRQSSLAIVSASLADFLRAAGVPFTLAAPTASGQ
CCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
EKSSVPEQTAQKGAAQAAGNEQGGKP
CHHCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SQTPNPAPPGQSAPSEAPEAPPQPWFRRPFFWGLLLFLALLLLAAWLFGKQWQEAESRK
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AEAAAQLAELQLQNQARQDFIEKLRLLLKEEPCEVQRRLPLLPPPAGVAWPPLPDSATGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GGVAAPPNAAPAQSRSTRPVSPPQDFAALMEQATVLVLAMQPEGLSMGSGFFVTSGHVVT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCEEEE
NAHVVGPAGKAVIVSKATGAPLAARVLQATQSAGRDFAVLAVENGPGITPLPLTTEVWRT
EEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCC
EKVSAWGFPGAVTNDDPKFLALLKGNDAAAPEVVYTEGVVSVILERNPPLIVHTATVSQG
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHEECCCCCEEEEEEEECCC
NSGGPLVNDKGEVVGINTFIKLDDGSYRQSSLAIVSASLADFLRAAGVPFTLAAPTASGQ
CCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
EKSSVPEQTAQKGAAQAAGNEQGGKP
CHHCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA