Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220904566

Identifier: 220904566

GI number: 220904566

Start: 1535726

End: 1536109

Strand: Direct

Name: 220904566

Synonym: Ddes_1297

Alternate gene names: NA

Gene position: 1535726-1536109 (Clockwise)

Preceding gene: 220904561

Following gene: 220904567

Centisome position: 53.45

GC content: 58.07

Gene sequence:

>384_bases
ATGAGACTTACTGCCAGACACGGCAGACTTGCCCTGACTTTACGCGTATTGCACCTGGGGCGTGACCTGCAGGTCATATG
CAGCGGAGGCCAGGCCCACATCGGCGCTGTGGCTGTGGCAAGCCCCCAGTCCACACGGGAAACAGGAAGTCATGTCCAAA
ACCTGATAAGCCTGCCCGGACACCGCGAAGATATCCTGGCAGCCCGGATGGCGCGCCACTTGGCCGATGCGCTGGACTGC
ACGGTGTGTGTGAGCGCCGGCATTCATTTTGATTGTATCACCAAAGAAGAAATAGAGCGAGTGCTCAACCTGGCCGCGAC
CCTGACAGGCCGCTGTATAACCAGGTTGAGACAACCCGCGAAGGACTGCCATGTTGACTGTTAA

Upstream 100 bases:

>100_bases
TTCAGACGCCATCCGCACTGTCCGCCCTATCCTTGCGGGACACGCCGCCGTGCGCTATGCTGTCCGCGCCTTCAACGGCA
CTTCATCGACAGGAGGATAC

Downstream 100 bases:

>100_bases
CGATTTGGAAAAGCTTGAAAAATACATCAAATCCGGCCAACTGGAGCAAGATTTTAAAGACGGCTGCGAAAATGACCGTT
TTTATCTTCTTGAACTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRLTARHGRLALTLRVLHLGRDLQVICSGGQAHIGAVAVASPQSTRETGSHVQNLISLPGHREDILAARMARHLADALDC
TVCVSAGIHFDCITKEEIERVLNLAATLTGRCITRLRQPAKDCHVDC

Sequences:

>Translated_127_residues
MRLTARHGRLALTLRVLHLGRDLQVICSGGQAHIGAVAVASPQSTRETGSHVQNLISLPGHREDILAARMARHLADALDC
TVCVSAGIHFDCITKEEIERVLNLAATLTGRCITRLRQPAKDCHVDC
>Mature_127_residues
MRLTARHGRLALTLRVLHLGRDLQVICSGGQAHIGAVAVASPQSTRETGSHVQNLISLPGHREDILAARMARHLADALDC
TVCVSAGIHFDCITKEEIERVLNLAATLTGRCITRLRQPAKDCHVDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13765; Mature: 13765

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTARHGRLALTLRVLHLGRDLQVICSGGQAHIGAVAVASPQSTRETGSHVQNLISLPG
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
HREDILAARMARHLADALDCTVCVSAGIHFDCITKEEIERVLNLAATLTGRCITRLRQPA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCH
KDCHVDC
HHCCCCC
>Mature Secondary Structure
MRLTARHGRLALTLRVLHLGRDLQVICSGGQAHIGAVAVASPQSTRETGSHVQNLISLPG
CCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
HREDILAARMARHLADALDCTVCVSAGIHFDCITKEEIERVLNLAATLTGRCITRLRQPA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCH
KDCHVDC
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA