| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is fhs
Identifier: 220904565
GI number: 220904565
Start: 1533445
End: 1535220
Strand: Reverse
Name: fhs
Synonym: Ddes_1296
Alternate gene names: 220904565
Gene position: 1535220-1533445 (Counterclockwise)
Preceding gene: 220904568
Following gene: 220904564
Centisome position: 53.43
GC content: 57.32
Gene sequence:
>1776_bases ATGACTTTGGATCCTACCAAGCACCCTGACTGGAAAATCGCTCTTGATGCGGAATCCCGCATGAAAACCGTTGAAACCCT TGCTGCAGAACTGGGCCTTGAAAAGGCTGAACTGCTGCCGTATGGGCATTATATGGGCAAGGTTGAGCAGCAGGCCGTGA TGCAGCGGCTAAAAGACCGCCCCAACGGAAAGTATATTGATGTTACTGCTATCACCCCCACGCCTTTGGGGGAGGGCAAG TCTACAACCACCATCGGCCTTGTGCAGGGTCTTGCACGACGCGGGCGGCGTTCTTCAGCGGCTATCCGTCAACCTTCCGG CGGACCCACCATGGGTATGAAAGGCTCCGCCGCAGGCGGCGGGCTTTCGCAATGCATTCCGCTGACCCCCTATTCTCTCA ATTTTACCGGCGACCTCCATGCCGTGGGCGCGGCCCACAACCTGGGCATGACGGCTTTGACATCGCGCATGCAGCATGAG CGCAATTATGACGATGCCACGCTGGAAAAACTTTCGGGTATGGCGCGTCTGAATATCGACCCCACCAGAATCAATACCGG CTGGGTCATGGATTTTTGTGTTCAGGCCCTGCGCAACATCATTATCGGCATCGAGGGTGATGGGCGACGTAATGATGGTT TCATGATGCGTTCGCACTTTGACATTACCGTTGCCTCTGAAGTTATGTGCATCCTTTCCATTGCCCGCGACCTGCGCGAC CTGCGCGAGCGGATGGGACGGATGGTGCTGGCACATGACCGCAACGGCAAACCTGTGACCACCAGCGACCTGGGCGTTGC CGGGGCCATGACTGCCTGGCTGGTAGAGGCCGCCAAACCCAACCTTATCCAGACCATTGAAGGGCAGCCCGTTTTTGTGC ATACCGGGCCTTTTGCCAATATTGCCCTTGGGCAAAGTTCGGTCATTGCCGACAGGGTGGCGCTCAAACTCAGCGACTAT CATGTGACGGAATCCGGCTTTGCTGCAGAAATGGGCTACGAAAAATTCTGGAACCTCAAATGCCATTATAGCGGCCTTGT GCCTGACGCAGCTGTTGTTGTGGCTACAGTGCGGGCGCTCAAAAATCACGGTGGTGCTCCCCAGCCCAAACCCGGTCAGG CACTGCCAGAGCCCTATACCCGTGAAGACGTGGGCCTTGTGGAAGCCGGATGCGCCAACCTGCTGCATCATCTGGGCATT GTACGGCGTTCGGGCGTACCCGCAGTGGTCTGCATCAATAAGTTCCATACCGATACCAAGGCAGAGGTCGACGCCATCCG TCGCATTTGCGAGCAGGCCGGAGCAAGGGTAGCCCTGTCGGAGCACTGGGAAAAAGGCGGAGAGGGCGCTCTGGAACTTG CTGACGCCGTTACGGACGCCTGCAATGAAAAGAACGAATTCCGGCCGCTCTACAATTGGAATTCGCCTCTTACCGAGCGC ATCACGACCATTGCTCAGGAGGTTTACGGGGCTGACGGAGTGGAGTTTGAGCCGCTTGCAGCCCAGCGCCTCAAAGATTT GCAGGAAAGACCCGATGCTGATGAACTGGGCGTCTGCATGGTGAAGACCCAATATTCCCTGTCTGACAAGCCTGCGCTCA AGGGCGTTCCCAAGGGCTGGAGGCTGCATGTGCGCGATGTGCTTTTCTTTGGCGGCGCGGGGCTTGTTGCCCCGGTGTCC GGCGATATCAGCCTGATGCCGGGGACCGGTTCAAAACCGGCTTTCCGCAACATTGATGTGGACGTGGAGACCGGCAAGGT AACAGGACTCTTCTAG
Upstream 100 bases:
>100_bases CGGCATAGGCGACTGTCCCAAAGCGAAACTGCTCTTACGGGCGGGCAGCCATACCCGCCGGAACGTGCCATAGAACATGC AACAACGATATGGAGCTGCC
Downstream 100 bases:
>100_bases GGTATTTGAGTAGGATATTCCCTTCGGAGCAACAGTATAGACAAACTGCATTGCACCCCGTAAATGTCTGTTCACGAGGA CACCAGGCAACTCAAAACAG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTLDPTKHPDWKIALDAESRMKTVETLAAELGLEKAELLPYGHYMGKVEQQAVMQRLKDRPNGKYIDVTAITPTPLGEGK STTTIGLVQGLARRGRRSSAAIRQPSGGPTMGMKGSAAGGGLSQCIPLTPYSLNFTGDLHAVGAAHNLGMTALTSRMQHE RNYDDATLEKLSGMARLNIDPTRINTGWVMDFCVQALRNIIIGIEGDGRRNDGFMMRSHFDITVASEVMCILSIARDLRD LRERMGRMVLAHDRNGKPVTTSDLGVAGAMTAWLVEAAKPNLIQTIEGQPVFVHTGPFANIALGQSSVIADRVALKLSDY HVTESGFAAEMGYEKFWNLKCHYSGLVPDAAVVVATVRALKNHGGAPQPKPGQALPEPYTREDVGLVEAGCANLLHHLGI VRRSGVPAVVCINKFHTDTKAEVDAIRRICEQAGARVALSEHWEKGGEGALELADAVTDACNEKNEFRPLYNWNSPLTER ITTIAQEVYGADGVEFEPLAAQRLKDLQERPDADELGVCMVKTQYSLSDKPALKGVPKGWRLHVRDVLFFGGAGLVAPVS GDISLMPGTGSKPAFRNIDVDVETGKVTGLF
Sequences:
>Translated_591_residues MTLDPTKHPDWKIALDAESRMKTVETLAAELGLEKAELLPYGHYMGKVEQQAVMQRLKDRPNGKYIDVTAITPTPLGEGK STTTIGLVQGLARRGRRSSAAIRQPSGGPTMGMKGSAAGGGLSQCIPLTPYSLNFTGDLHAVGAAHNLGMTALTSRMQHE RNYDDATLEKLSGMARLNIDPTRINTGWVMDFCVQALRNIIIGIEGDGRRNDGFMMRSHFDITVASEVMCILSIARDLRD LRERMGRMVLAHDRNGKPVTTSDLGVAGAMTAWLVEAAKPNLIQTIEGQPVFVHTGPFANIALGQSSVIADRVALKLSDY HVTESGFAAEMGYEKFWNLKCHYSGLVPDAAVVVATVRALKNHGGAPQPKPGQALPEPYTREDVGLVEAGCANLLHHLGI VRRSGVPAVVCINKFHTDTKAEVDAIRRICEQAGARVALSEHWEKGGEGALELADAVTDACNEKNEFRPLYNWNSPLTER ITTIAQEVYGADGVEFEPLAAQRLKDLQERPDADELGVCMVKTQYSLSDKPALKGVPKGWRLHVRDVLFFGGAGLVAPVS GDISLMPGTGSKPAFRNIDVDVETGKVTGLF >Mature_590_residues TLDPTKHPDWKIALDAESRMKTVETLAAELGLEKAELLPYGHYMGKVEQQAVMQRLKDRPNGKYIDVTAITPTPLGEGKS TTTIGLVQGLARRGRRSSAAIRQPSGGPTMGMKGSAAGGGLSQCIPLTPYSLNFTGDLHAVGAAHNLGMTALTSRMQHER NYDDATLEKLSGMARLNIDPTRINTGWVMDFCVQALRNIIIGIEGDGRRNDGFMMRSHFDITVASEVMCILSIARDLRDL RERMGRMVLAHDRNGKPVTTSDLGVAGAMTAWLVEAAKPNLIQTIEGQPVFVHTGPFANIALGQSSVIADRVALKLSDYH VTESGFAAEMGYEKFWNLKCHYSGLVPDAAVVVATVRALKNHGGAPQPKPGQALPEPYTREDVGLVEAGCANLLHHLGIV RRSGVPAVVCINKFHTDTKAEVDAIRRICEQAGARVALSEHWEKGGEGALELADAVTDACNEKNEFRPLYNWNSPLTERI TTIAQEVYGADGVEFEPLAAQRLKDLQERPDADELGVCMVKTQYSLSDKPALKGVPKGWRLHVRDVLFFGGAGLVAPVSG DISLMPGTGSKPAFRNIDVDVETGKVTGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI36796743, Length=612, Percent_Identity=45.4248366013072, Blast_Score=481, Evalue=1e-136, Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=45.0885668276973, Blast_Score=479, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17568737, Length=625, Percent_Identity=44.32, Blast_Score=469, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=625, Percent_Identity=44.32, Blast_Score=469, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321643, Length=623, Percent_Identity=47.0304975922953, Blast_Score=506, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6319558, Length=625, Percent_Identity=44.48, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI62472483, Length=633, Percent_Identity=40.7582938388626, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI45551871, Length=633, Percent_Identity=40.7582938388626, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI24645718, Length=633, Percent_Identity=40.7582938388626, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI17137370, Length=633, Percent_Identity=40.7582938388626, Blast_Score=443, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_DESDA (B8J0C2)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002479877.1 - GeneID: 7284988 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_1296 - HOGENOM: HBG677721 - ProtClustDB: PRK13507 - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 63965; Mature: 63834
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPTKHPDWKIALDAESRMKTVETLAAELGLEKAELLPYGHYMGKVEQQAVMQRLKDR CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCC PNGKYIDVTAITPTPLGEGKSTTTIGLVQGLARRGRRSSAAIRQPSGGPTMGMKGSAAGG CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GLSQCIPLTPYSLNFTGDLHAVGAAHNLGMTALTSRMQHERNYDDATLEKLSGMARLNID CHHHCCCCCCEEEECCCCCCEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCEEECCC PTRINTGWVMDFCVQALRNIIIGIEGDGRRNDGFMMRSHFDITVASEVMCILSIARDLRD CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHH LRERMGRMVLAHDRNGKPVTTSDLGVAGAMTAWLVEAAKPNLIQTIEGQPVFVHTGPFAN HHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCE IALGQSSVIADRVALKLSDYHVTESGFAAEMGYEKFWNLKCHYSGLVPDAAVVVATVRAL EECCCHHHHHHHHEEEEECEEECCCCCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHHH KNHGGAPQPKPGQALPEPYTREDVGLVEAGCANLLHHLGIVRRSGVPAVVCINKFHTDTK HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH AEVDAIRRICEQAGARVALSEHWEKGGEGALELADAVTDACNEKNEFRPLYNWNSPLTER HHHHHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH ITTIAQEVYGADGVEFEPLAAQRLKDLQERPDADELGVCMVKTQYSLSDKPALKGVPKGW HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCCCCCCCCCC RLHVRDVLFFGGAGLVAPVSGDISLMPGTGSKPAFRNIDVDVETGKVTGLF EEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCEECCC >Mature Secondary Structure TLDPTKHPDWKIALDAESRMKTVETLAAELGLEKAELLPYGHYMGKVEQQAVMQRLKDR CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCC PNGKYIDVTAITPTPLGEGKSTTTIGLVQGLARRGRRSSAAIRQPSGGPTMGMKGSAAGG CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GLSQCIPLTPYSLNFTGDLHAVGAAHNLGMTALTSRMQHERNYDDATLEKLSGMARLNID CHHHCCCCCCEEEECCCCCCEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCEEECCC PTRINTGWVMDFCVQALRNIIIGIEGDGRRNDGFMMRSHFDITVASEVMCILSIARDLRD CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHH LRERMGRMVLAHDRNGKPVTTSDLGVAGAMTAWLVEAAKPNLIQTIEGQPVFVHTGPFAN HHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCE IALGQSSVIADRVALKLSDYHVTESGFAAEMGYEKFWNLKCHYSGLVPDAAVVVATVRAL EECCCHHHHHHHHEEEEECEEECCCCCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHHH KNHGGAPQPKPGQALPEPYTREDVGLVEAGCANLLHHLGIVRRSGVPAVVCINKFHTDTK HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH AEVDAIRRICEQAGARVALSEHWEKGGEGALELADAVTDACNEKNEFRPLYNWNSPLTER HHHHHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH ITTIAQEVYGADGVEFEPLAAQRLKDLQERPDADELGVCMVKTQYSLSDKPALKGVPKGW HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHCCEEEEEEECCCCCCCCCCCCCCCC RLHVRDVLFFGGAGLVAPVSGDISLMPGTGSKPAFRNIDVDVETGKVTGLF EEEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA