| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904545
Identifier: 220904545
GI number: 220904545
Start: 1503157
End: 1504656
Strand: Direct
Name: 220904545
Synonym: Ddes_1276
Alternate gene names: NA
Gene position: 1503157-1504656 (Clockwise)
Preceding gene: 220904544
Following gene: 220904548
Centisome position: 52.31
GC content: 59.73
Gene sequence:
>1500_bases ATGACCCGCCCCGCCGGCCTGAACATACTCCTTCTCTGCGAAAGTGAATCGCTGTCAAGCCTTGACCGTCGTGCCCTGCG AGAGGCCGGAGCCAGCCGGGTTGAATGCATGACCTCAGGCATAGAGGCTGCCCGAATGCTGGCAGGCCTCGATGCTTCCG GCCCTGGTTTCACGCCTGACATCGTAGTTTGCTCCCAAAAACTGGCTGATATGGATGGCGAACAGTTTTGTGCCATCCTG CGGCTGCACCCCCTGCTTCTCGGACTGCCCATTCTTCTTCTGCTGCCCAATGACAGTGAGGCCGAGCAACTCAGAACCCT GGGATGTGGAGCCAGCGCCCTTCTTGCGCGCCCCTACTCCATCAATGTGCTGAAAACGCACCTGGATTCACTTGCCGCCA CGGCATCAGGCACGCAGCAGCTGCAGGCTGCCCGGCAATACACGGATACCAGTGCTTTTGATCAGGCCCTTGATACCTAT GGCATGCTGCTCAAGCCAGTGCGCCAGCCCGAGGATTATTTTCGCGTAGGCATGCAGTGCCTGCAACAGCGGCAGTGGAA TACGGCCATCAACGCTTTTCAGCGTGCTTTGGGCGGCGCCCTTATCCAGGGACAGGCTCAGCTCGGCATGGCCGTGGCGT GGAAGGGCAAGGGCGATATGGCCCGCTATCGTCACTACCTTGGCCTTGCCGCAGCGACCTTTGTGCGGGCTAAAAACTGG CATCGCGCGCGGGCAGTCTATGCGGGTCTGCTCAGGGAAGACCCCGAAGCAAAAAACCCTTTTCTGTCCGAATCTTTTCA GCTCATACGGCAGGAAAGATACGATGAGGCCGCAGAAGTACTATCCCACGGGCATGAGCTTATCCCCCGCCGTCAGATGA CTGAACGTCTGGCCCAGACCTGCCTGAGCGCCGACCAGCCACAGCACATGCTGGAAAAGCTGGAAGACAGCCTTGGCCGC ATCATGGGAGCCGCCGCCGGAACACTGGCTGACGACATACGGGCCAATCTGGAAGGTCTGGCCCGCCAGCAGGAAGAAAA ACGCCGACAGGAAGCGGCGGAAACACAGTGGCGCGCCACACGTCAGGCGGCCCGGCAACGTGAAAATGCCGAACAGGCTG AAGCCGCCAGGGCAATGGAAAATTCGCAACCAGCTGGAACCGTTACAGGCCGGTCCGGCAGCGCGGCATCAGACGCCGTT TCCCGGTCAAATTCCGCGGACGCAGTGCCGCGCGAAACGAGTTCCCATCCGTTACCTGTCCCGCCGTGGGGGCACGATCA GGATCAGGTTGGAGCGGCGCGTTTCGTGCAAACACCTTCAGACGCCCGGCAGCATGCACAGGGCAGGAACACGCTTGAAG AAATCAGTGAGGAGCCGGTTCTGGAACCACTGAGTGAAGCCGAGGGAACAAGCGGCCTGTTCAACAGCAAACCAGGACTC AACGAACTGTTGTCCGTCATGAAATATACTTGGAAAATGGCCCGCCGCCGCAAACAGTGA
Upstream 100 bases:
>100_bases CCTTGCCTATACGCCATCATCCCTGTAGCATTCAGTACAGGAGCACGGCGGCAACAGCCCCTTCGCCTCCAGGAACTCTC CCTGTCCGCCAAGGAATGAC
Downstream 100 bases:
>100_bases CCTTTCCATGCCAGCCCGACGCGCCTGTCGAAGGATTGTCGCGCAGGCGGCCTGCCTCATCGCCTTATGCGGCTGAACAC CACCTGCGGTGCAAGACTGT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver; CheY-Like Receiver
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTRPAGLNILLLCESESLSSLDRRALREAGASRVECMTSGIEAARMLAGLDASGPGFTPDIVVCSQKLADMDGEQFCAIL RLHPLLLGLPILLLLPNDSEAEQLRTLGCGASALLARPYSINVLKTHLDSLAATASGTQQLQAARQYTDTSAFDQALDTY GMLLKPVRQPEDYFRVGMQCLQQRQWNTAINAFQRALGGALIQGQAQLGMAVAWKGKGDMARYRHYLGLAAATFVRAKNW HRARAVYAGLLREDPEAKNPFLSESFQLIRQERYDEAAEVLSHGHELIPRRQMTERLAQTCLSADQPQHMLEKLEDSLGR IMGAAAGTLADDIRANLEGLARQQEEKRRQEAAETQWRATRQAARQRENAEQAEAARAMENSQPAGTVTGRSGSAASDAV SRSNSADAVPRETSSHPLPVPPWGHDQDQVGAARFVQTPSDARQHAQGRNTLEEISEEPVLEPLSEAEGTSGLFNSKPGL NELLSVMKYTWKMARRRKQ
Sequences:
>Translated_499_residues MTRPAGLNILLLCESESLSSLDRRALREAGASRVECMTSGIEAARMLAGLDASGPGFTPDIVVCSQKLADMDGEQFCAIL RLHPLLLGLPILLLLPNDSEAEQLRTLGCGASALLARPYSINVLKTHLDSLAATASGTQQLQAARQYTDTSAFDQALDTY GMLLKPVRQPEDYFRVGMQCLQQRQWNTAINAFQRALGGALIQGQAQLGMAVAWKGKGDMARYRHYLGLAAATFVRAKNW HRARAVYAGLLREDPEAKNPFLSESFQLIRQERYDEAAEVLSHGHELIPRRQMTERLAQTCLSADQPQHMLEKLEDSLGR IMGAAAGTLADDIRANLEGLARQQEEKRRQEAAETQWRATRQAARQRENAEQAEAARAMENSQPAGTVTGRSGSAASDAV SRSNSADAVPRETSSHPLPVPPWGHDQDQVGAARFVQTPSDARQHAQGRNTLEEISEEPVLEPLSEAEGTSGLFNSKPGL NELLSVMKYTWKMARRRKQ >Mature_498_residues TRPAGLNILLLCESESLSSLDRRALREAGASRVECMTSGIEAARMLAGLDASGPGFTPDIVVCSQKLADMDGEQFCAILR LHPLLLGLPILLLLPNDSEAEQLRTLGCGASALLARPYSINVLKTHLDSLAATASGTQQLQAARQYTDTSAFDQALDTYG MLLKPVRQPEDYFRVGMQCLQQRQWNTAINAFQRALGGALIQGQAQLGMAVAWKGKGDMARYRHYLGLAAATFVRAKNWH RARAVYAGLLREDPEAKNPFLSESFQLIRQERYDEAAEVLSHGHELIPRRQMTERLAQTCLSADQPQHMLEKLEDSLGRI MGAAAGTLADDIRANLEGLARQQEEKRRQEAAETQWRATRQAARQRENAEQAEAARAMENSQPAGTVTGRSGSAASDAVS RSNSADAVPRETSSHPLPVPPWGHDQDQVGAARFVQTPSDARQHAQGRNTLEEISEEPVLEPLSEAEGTSGLFNSKPGLN ELLSVMKYTWKMARRRKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54761; Mature: 54630
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPAGLNILLLCESESLSSLDRRALREAGASRVECMTSGIEAARMLAGLDASGPGFTPD CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IVVCSQKLADMDGEQFCAILRLHPLLLGLPILLLLPNDSEAEQLRTLGCGASALLARPYS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCHHHHHCCCCC INVLKTHLDSLAATASGTQQLQAARQYTDTSAFDQALDTYGMLLKPVRQPEDYFRVGMQC HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LQQRQWNTAINAFQRALGGALIQGQAQLGMAVAWKGKGDMARYRHYLGLAAATFVRAKNW HHHHHHHHHHHHHHHHHCCHHEECHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCH HRARAVYAGLLREDPEAKNPFLSESFQLIRQERYDEAAEVLSHGHELIPRRQMTERLAQT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH CLSADQPQHMLEKLEDSLGRIMGAAAGTLADDIRANLEGLARQQEEKRRQEAAETQWRAT HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAARQRENAEQAEAARAMENSQPAGTVTGRSGSAASDAVSRSNSADAVPRETSSHPLPV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC PPWGHDQDQVGAARFVQTPSDARQHAQGRNTLEEISEEPVLEPLSEAEGTSGLFNSKPGL CCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCH NELLSVMKYTWKMARRRKQ HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRPAGLNILLLCESESLSSLDRRALREAGASRVECMTSGIEAARMLAGLDASGPGFTPD CCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IVVCSQKLADMDGEQFCAILRLHPLLLGLPILLLLPNDSEAEQLRTLGCGASALLARPYS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCHHHHHCCCCC INVLKTHLDSLAATASGTQQLQAARQYTDTSAFDQALDTYGMLLKPVRQPEDYFRVGMQC HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LQQRQWNTAINAFQRALGGALIQGQAQLGMAVAWKGKGDMARYRHYLGLAAATFVRAKNW HHHHHHHHHHHHHHHHHCCHHEECHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCH HRARAVYAGLLREDPEAKNPFLSESFQLIRQERYDEAAEVLSHGHELIPRRQMTERLAQT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH CLSADQPQHMLEKLEDSLGRIMGAAAGTLADDIRANLEGLARQQEEKRRQEAAETQWRAT HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAARQRENAEQAEAARAMENSQPAGTVTGRSGSAASDAVSRSNSADAVPRETSSHPLPV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC PPWGHDQDQVGAARFVQTPSDARQHAQGRNTLEEISEEPVLEPLSEAEGTSGLFNSKPGL CCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCH NELLSVMKYTWKMARRRKQ HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA