Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904541
Identifier: 220904541
GI number: 220904541
Start: 1500151
End: 1500522
Strand: Direct
Name: 220904541
Synonym: Ddes_1272
Alternate gene names: NA
Gene position: 1500151-1500522 (Clockwise)
Preceding gene: 220904539
Following gene: 220904542
Centisome position: 52.21
GC content: 58.06
Gene sequence:
>372_bases ATGAACAAAGCCAACGCACACCCCGCCAAAATCCGCTACAGGTACAAAATGGACGAAGACGCCCGCCTGCAAACGGCCCA CGGCGTATGGGGGGGCATCAACCCCCAGGGCGAAATAGAAATGAATTTTTATCATGAAAGCGACTCACTGCCCGCTTTTT CCGAGCAGCTTGTGGCTCCTGACGGCTCCATCGGGCACGAAATGATCCCGGGCGAAGAAGATGCGCGTGAAGTTACCCGC TGCATCCACAGCCGCATCCTGCTCAATTACCATACCGCCCGCGCCGTGCTGGACTGGCTGGAAGACCGCGTGGCCGCCCT GGAAGAAGAGGCCTCCGGCATGTACGAGGCAGACCTGGACATTGAACAATAG
Upstream 100 bases:
>100_bases TTACGCGCTCCTGACCGTCATGCCCGGCTTTACTTGGCAGGACAGCTTTTTTATCATATGCCTTTGCCCCATACGTCATG AACGAAGAAAAGGAATCCGT
Downstream 100 bases:
>100_bases TAGTCATGATCGAAAAATCTTATCATATCATTACGTTCGGCTGCCAGATGAACGTGCACGACTCCCAGTGGCTGGGCCGT GCCCTCACAGCTCGCGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNKANAHPAKIRYRYKMDEDARLQTAHGVWGGINPQGEIEMNFYHESDSLPAFSEQLVAPDGSIGHEMIPGEEDAREVTR CIHSRILLNYHTARAVLDWLEDRVAALEEEASGMYEADLDIEQ
Sequences:
>Translated_123_residues MNKANAHPAKIRYRYKMDEDARLQTAHGVWGGINPQGEIEMNFYHESDSLPAFSEQLVAPDGSIGHEMIPGEEDAREVTR CIHSRILLNYHTARAVLDWLEDRVAALEEEASGMYEADLDIEQ >Mature_123_residues MNKANAHPAKIRYRYKMDEDARLQTAHGVWGGINPQGEIEMNFYHESDSLPAFSEQLVAPDGSIGHEMIPGEEDAREVTR CIHSRILLNYHTARAVLDWLEDRVAALEEEASGMYEADLDIEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13955; Mature: 13955
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKANAHPAKIRYRYKMDEDARLQTAHGVWGGINPQGEIEMNFYHESDSLPAFSEQLVAP CCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHCCC DGSIGHEMIPGEEDAREVTRCIHSRILLNYHTARAVLDWLEDRVAALEEEASGMYEADLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC IEQ CCC >Mature Secondary Structure MNKANAHPAKIRYRYKMDEDARLQTAHGVWGGINPQGEIEMNFYHESDSLPAFSEQLVAP CCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHCCC DGSIGHEMIPGEEDAREVTRCIHSRILLNYHTARAVLDWLEDRVAALEEEASGMYEADLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC IEQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA