| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904540
Identifier: 220904540
GI number: 220904540
Start: 1499254
End: 1499850
Strand: Reverse
Name: 220904540
Synonym: Ddes_1271
Alternate gene names: NA
Gene position: 1499850-1499254 (Counterclockwise)
Preceding gene: 220904546
Following gene: 220904538
Centisome position: 52.2
GC content: 56.95
Gene sequence:
>597_bases GTGAGCGAGGTTAACAGTGCGGGCAACGAGGCCAGTGTAAAGACACACGACATCCAGCCCTATTTTGACATGGAAGGCTT CATGGTCATGAGCCAGGAAAAACGGCTCGGGGGGGCGGTGCTGGAGCGCCTGGTCGAATTGTGGGGCCAGTGGCTGCCGC AGTTGAAGGTATGTGAAATCTCTACAGGCAAGATATCATATCTTGCGGTCTGGCTGCCGGAATCCATCGAGGTCGATGTG GACGAGGCTTGGGAAAAATCAGCATCTGACGGGTTTATGATCAACAATCTCGCCCAGTTTATGTGCATGAGCGCTGTGCA GGCTATGCTGCCTCAGGTGGAAGATGCCGGCTGTGCTCCATCGCCCCGGCCCACGGAAGCACTGCGCGCGGCTCTGGAAA AAATGGGCCTTGAATACAGGCCCGGTTCGTCGGTGCTTATGCGCCGCTATGCAGTTGTTACGCATTTTCCTTTCCGCGGC GGCTGCGAAATCTGCCACCTTCAGTCCGAATGTCCCAAAGGGCAGGGACAGGCCGAAAGTGCCAGTATTCTGTTGCCCGG CTATGAACGCGGCTCGGACGGCGGAATCAGCCAGTAA
Upstream 100 bases:
>100_bases GGTTAAACTATCAGTCGGGGAGTACGCGCGTCTGGTTGACGGATGTGGGCGTATTGCTTTGGCGGCGTGTTGCCGCGTAT TTTTCTTCCAAGGAGCGCAT
Downstream 100 bases:
>100_bases GGTTCGGGGGGGGGCGGCCTGAACGGCCGCTTCCCGCCTGTTTTTTACCGGCCTTCCATTACAAGGGTACGGGTTGCCCC CGCGGAGGTTCGTACCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSEVNSAGNEASVKTHDIQPYFDMEGFMVMSQEKRLGGAVLERLVELWGQWLPQLKVCEISTGKISYLAVWLPESIEVDV DEAWEKSASDGFMINNLAQFMCMSAVQAMLPQVEDAGCAPSPRPTEALRAALEKMGLEYRPGSSVLMRRYAVVTHFPFRG GCEICHLQSECPKGQGQAESASILLPGYERGSDGGISQ
Sequences:
>Translated_198_residues MSEVNSAGNEASVKTHDIQPYFDMEGFMVMSQEKRLGGAVLERLVELWGQWLPQLKVCEISTGKISYLAVWLPESIEVDV DEAWEKSASDGFMINNLAQFMCMSAVQAMLPQVEDAGCAPSPRPTEALRAALEKMGLEYRPGSSVLMRRYAVVTHFPFRG GCEICHLQSECPKGQGQAESASILLPGYERGSDGGISQ >Mature_197_residues SEVNSAGNEASVKTHDIQPYFDMEGFMVMSQEKRLGGAVLERLVELWGQWLPQLKVCEISTGKISYLAVWLPESIEVDVD EAWEKSASDGFMINNLAQFMCMSAVQAMLPQVEDAGCAPSPRPTEALRAALEKMGLEYRPGSSVLMRRYAVVTHFPFRGG CEICHLQSECPKGQGQAESASILLPGYERGSDGGISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21724; Mature: 21593
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVNSAGNEASVKTHDIQPYFDMEGFMVMSQEKRLGGAVLERLVELWGQWLPQLKVCEI CCCCCCCCCCCCEEECCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEE STGKISYLAVWLPESIEVDVDEAWEKSASDGFMINNLAQFMCMSAVQAMLPQVEDAGCAP CCCCEEEEEEECCCCEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPRPTEALRAALEKMGLEYRPGSSVLMRRYAVVTHFPFRGGCEICHLQSECPKGQGQAES CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCC ASILLPGYERGSDGGISQ CEEEECCCCCCCCCCCCC >Mature Secondary Structure SEVNSAGNEASVKTHDIQPYFDMEGFMVMSQEKRLGGAVLERLVELWGQWLPQLKVCEI CCCCCCCCCCCEEECCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEE STGKISYLAVWLPESIEVDVDEAWEKSASDGFMINNLAQFMCMSAVQAMLPQVEDAGCAP CCCCEEEEEEECCCCEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SPRPTEALRAALEKMGLEYRPGSSVLMRRYAVVTHFPFRGGCEICHLQSECPKGQGQAES CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCC ASILLPGYERGSDGGISQ CEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA