| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is fieF [H]
Identifier: 220904472
GI number: 220904472
Start: 1413186
End: 1414652
Strand: Direct
Name: fieF [H]
Synonym: Ddes_1202
Alternate gene names: 220904472
Gene position: 1413186-1414652 (Clockwise)
Preceding gene: 220904471
Following gene: 220904474
Centisome position: 49.18
GC content: 56.1
Gene sequence:
>1467_bases ATGTCCAGTTCGCTGGAAGCCAGTGCTGAAAAAAATCGTGCGGCGCTTACATCATTGTGGGCGGCCTTTGCCCTTACTGC CGTCAAGCTTGCTGTAGGGCTGCACACAAACAGCCTGGGCATTTTGTCTGAAGCACTTCACAGTGGCCTTGATTTGCTGG CGGCAGCCATGACTCTTGCTGCCGTGCGTGTGGCATCCAGACCCGCAGACGCGCGACATCCCTACGGTCACGGCAAGATA GAAAACCTTTCGGCGCTGGCCCAGACGCTGTTGCTGTTTTTGACCTGTTTTTGGGTCGTCCACGAAGGCGTGCAGCGCCT CTTGGCTGGTGCAAGCCCCGTAACGCCTTCTTTGTGGGGCGTTGGGGTTATGGCTCTTTCTATCGTTATTGATGTCAACA GGGTCCGCGTGCTGCGCCGTGTGGCAAAAAAATATAAAAGCCAAGCGCTTGAGGCTGATGCATTACACTTTTCCACTGAT ATTCTTTCTTCAGCGGTGGTTCTTGTTGGTGTTCTTGCCGTATGGCTGGCTTCTGCCCTCAATGTTCCGGGGCCGATGCA TGCGGTACTGGTTCAGGCTGATACGGTAGCCGCCCTGCTTGTCGCCGTTATCATTTTTCGCGCCAGCATTCGCATGGCTC GTCAGGCTGTCGATATCCTTATGGACTCCGGCTCCATGCGCGAGCAGCAGGCCATTATAAAGGTTGTCGGCCGGGTGCCT GGCATTACGAATGTTCGCGATGTGCGCCTGCGCACCAGCGGTCCCACCAGTTTTGTGGATCTGACTGTAGGGGTAGAGCC GGGCATACAGGTCAGCGAAGGGCATAAGCTGGCCCATGAGGCGGAAGAGGCCGTGGCTTCAGTGCTGGAAGGCGCGGACG TGACCGTCCATGTAGAGCCGCATAGTGCCGAGGATGACAGACACTGTGATCCATTCGTGCAGGTGCAGCACACCGCCTGG AAGCATGCCCTGGCTGTGCATAACGTGCACATCCTGCGTTCGGCTGGTAACTGTTTTGTTGAATTGCATGTAGAGCTTCC CGGCAAGATGCCCTTTGTGCAGGCATATGGCCGGGTGGTGGATTTTGAAGACGATCTGCGCAAAACCATGCCCGGCAGCG AGGTTGTGAGTCATCTTGAGCCGGTGGGCACTGCTTACGCGCTGGCGTATGGGGCTTCTGTATCGGTACCGTATGCCGAG ATGGTTTGGCGTGAAATAGAAGCTGTGCTTGCAAAAGAGCCGTTGGCCTGTAACCCGCACAAGTTTTCGACCTACGAATT GCCGGAGCAGGGCGTTTGCATTTCTTTCCACTGCGATGTGGACGCCACGTTGAGCGTTGAAGAGGCGCATACCGTATGCA TGCGCCTGGAAAAACAATTACGTCTGAGCGCCCCGCAGTTGGGCCGTATCATTATTCATATGGAGCCGGGAGCACGCCCC CAAAGGGAGCAGGGTAGCGTCATATAG
Upstream 100 bases:
>100_bases GGCAGAAACGTCAAGGGTCCTGGCGTGAATGGTTCAAATGGCTATAGGAACTTAAAGATAAAAGCCCCTCCGGGGGCTTT TTTTACTCGTGGGGTCTGTT
Downstream 100 bases:
>100_bases GGCGACCATCTGCCTACTGTGCATTTTCTGCCGATGGTATTATGGTAACTCCGGCGGCCCGGGCCAGTTCCTGCCACAGG CGATCAATGCCCAGACGGCT
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSSSLEASAEKNRAALTSLWAAFALTAVKLAVGLHTNSLGILSEALHSGLDLLAAAMTLAAVRVASRPADARHPYGHGKI ENLSALAQTLLLFLTCFWVVHEGVQRLLAGASPVTPSLWGVGVMALSIVIDVNRVRVLRRVAKKYKSQALEADALHFSTD ILSSAVVLVGVLAVWLASALNVPGPMHAVLVQADTVAALLVAVIIFRASIRMARQAVDILMDSGSMREQQAIIKVVGRVP GITNVRDVRLRTSGPTSFVDLTVGVEPGIQVSEGHKLAHEAEEAVASVLEGADVTVHVEPHSAEDDRHCDPFVQVQHTAW KHALAVHNVHILRSAGNCFVELHVELPGKMPFVQAYGRVVDFEDDLRKTMPGSEVVSHLEPVGTAYALAYGASVSVPYAE MVWREIEAVLAKEPLACNPHKFSTYELPEQGVCISFHCDVDATLSVEEAHTVCMRLEKQLRLSAPQLGRIIIHMEPGARP QREQGSVI
Sequences:
>Translated_488_residues MSSSLEASAEKNRAALTSLWAAFALTAVKLAVGLHTNSLGILSEALHSGLDLLAAAMTLAAVRVASRPADARHPYGHGKI ENLSALAQTLLLFLTCFWVVHEGVQRLLAGASPVTPSLWGVGVMALSIVIDVNRVRVLRRVAKKYKSQALEADALHFSTD ILSSAVVLVGVLAVWLASALNVPGPMHAVLVQADTVAALLVAVIIFRASIRMARQAVDILMDSGSMREQQAIIKVVGRVP GITNVRDVRLRTSGPTSFVDLTVGVEPGIQVSEGHKLAHEAEEAVASVLEGADVTVHVEPHSAEDDRHCDPFVQVQHTAW KHALAVHNVHILRSAGNCFVELHVELPGKMPFVQAYGRVVDFEDDLRKTMPGSEVVSHLEPVGTAYALAYGASVSVPYAE MVWREIEAVLAKEPLACNPHKFSTYELPEQGVCISFHCDVDATLSVEEAHTVCMRLEKQLRLSAPQLGRIIIHMEPGARP QREQGSVI >Mature_487_residues SSSLEASAEKNRAALTSLWAAFALTAVKLAVGLHTNSLGILSEALHSGLDLLAAAMTLAAVRVASRPADARHPYGHGKIE NLSALAQTLLLFLTCFWVVHEGVQRLLAGASPVTPSLWGVGVMALSIVIDVNRVRVLRRVAKKYKSQALEADALHFSTDI LSSAVVLVGVLAVWLASALNVPGPMHAVLVQADTVAALLVAVIIFRASIRMARQAVDILMDSGSMREQQAIIKVVGRVPG ITNVRDVRLRTSGPTSFVDLTVGVEPGIQVSEGHKLAHEAEEAVASVLEGADVTVHVEPHSAEDDRHCDPFVQVQHTAWK HALAVHNVHILRSAGNCFVELHVELPGKMPFVQAYGRVVDFEDDLRKTMPGSEVVSHLEPVGTAYALAYGASVSVPYAEM VWREIEAVLAKEPLACNPHKFSTYELPEQGVCISFHCDVDATLSVEEAHTVCMRLEKQLRLSAPQLGRIIIHMEPGARPQ REQGSVI
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=279, Percent_Identity=30.4659498207885, Blast_Score=141, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 52581; Mature: 52450
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLEASAEKNRAALTSLWAAFALTAVKLAVGLHTNSLGILSEALHSGLDLLAAAMTLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AVRVASRPADARHPYGHGKIENLSALAQTLLLFLTCFWVVHEGVQRLLAGASPVTPSLWG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VGVMALSIVIDVNRVRVLRRVAKKYKSQALEADALHFSTDILSSAVVLVGVLAVWLASAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVPGPMHAVLVQADTVAALLVAVIIFRASIRMARQAVDILMDSGSMREQQAIIKVVGRVP CCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC GITNVRDVRLRTSGPTSFVDLTVGVEPGIQVSEGHKLAHEAEEAVASVLEGADVTVHVEP CCCCCEEEEEECCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECC HSAEDDRHCDPFVQVQHTAWKHALAVHNVHILRSAGNCFVELHVELPGKMPFVQAYGRVV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCHHHHHHCCCC DFEDDLRKTMPGSEVVSHLEPVGTAYALAYGASVSVPYAEMVWREIEAVLAKEPLACNPH CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC KFSTYELPEQGVCISFHCDVDATLSVEEAHTVCMRLEKQLRLSAPQLGRIIIHMEPGARP CCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC QREQGSVI CCCCCCCC >Mature Secondary Structure SSSLEASAEKNRAALTSLWAAFALTAVKLAVGLHTNSLGILSEALHSGLDLLAAAMTLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AVRVASRPADARHPYGHGKIENLSALAQTLLLFLTCFWVVHEGVQRLLAGASPVTPSLWG HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH VGVMALSIVIDVNRVRVLRRVAKKYKSQALEADALHFSTDILSSAVVLVGVLAVWLASAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVPGPMHAVLVQADTVAALLVAVIIFRASIRMARQAVDILMDSGSMREQQAIIKVVGRVP CCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC GITNVRDVRLRTSGPTSFVDLTVGVEPGIQVSEGHKLAHEAEEAVASVLEGADVTVHVEP CCCCCEEEEEECCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECC HSAEDDRHCDPFVQVQHTAWKHALAVHNVHILRSAGNCFVELHVELPGKMPFVQAYGRVV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCHHHHHHCCCC DFEDDLRKTMPGSEVVSHLEPVGTAYALAYGASVSVPYAEMVWREIEAVLAKEPLACNPH CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC KFSTYELPEQGVCISFHCDVDATLSVEEAHTVCMRLEKQLRLSAPQLGRIIIHMEPGARP CCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC QREQGSVI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA