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The map label for this gene is 220904425

Identifier: 220904425

GI number: 220904425

Start: 1363153

End: 1364259

Strand: Direct

Name: 220904425

Synonym: Ddes_1155

Alternate gene names: NA

Gene position: 1363153-1364259 (Clockwise)

Preceding gene: 220904424

Following gene: 220904426

Centisome position: 47.44

GC content: 50.86

Gene sequence:

>1107_bases
ATGTGCAGAATCGGTGCTATCAAGAGCAGCATGCCGGTATCGCCCTCAGTGGCGCTCAATCTTATGTTGCCACAGCAGGA
AGGGCACGACAATTCCGGCTTTGCCATGATCATGCAGGACCTGGAGGGGGTGTTCAGCCATTATAAAGACAAGCCCCTGC
TTTCTCTGGCCTGCACACCTCAAGGTGTACAGCTTGTCAATGATTTTATGGAAAAAAAAGGTTTTGTGCAGGTCGCCCAG
TGGGTTCCTGATGTAGACAGGCAGCCGGGCCTCAAGGTAGAGGCCATGCCCCGTTATATCTTTAGAAATTACGATTATCC
GGAAATATATCGCTATCGGATGCAACAAGACCGTGATGATCTGCTGCTTGATACGCGGCTTGCGCTACGGGCCTTGCTGG
CAAAGAACAATGACGGCTTTGTCTATTCCTTCTGGCCCGATACGTTGACGCTGAAAGAAATAGGCGACCCGGCAGATATC
GCCACCTACTTTCGCCTCTGGAATGATGATGAGCGTCTGACCGCCAAAAATATTGTTGTCCAGTGCCGCCAGAACACCAA
TTATGACATTGTGCGGTATGCGGCTCATCCTTTTTTTATTCAGGGCTATACCGTTTGCGCCAATGGAGAGAATACTTTTT
TTACCAGAAACAAAGAACTTCAGAGTGCACTGCACAGGGGTTATGTCGGCTTTGAGTCTGATTCGCAAACCTTGCTGTAC
ACACTGCACTATGTGCTGCATGAGCTTGAGTGGCCCGTAAAATATTTCAAGCATGTCATCACGCCCCTGCCATTTACGGA
GGCAGAGCAGCGCGCTGACGGCAAGGTGCTTGCCCTTATACGGGAATCACTGGCGCATCTGGAAATCAATGGCCCCAACG
CCATCATCGCTCTTTTGCCTGATGGGAACATGATGACCTGCTGTGACTCAAAAAAATTGCGCCCCGTCGTTGTCGGCCGT
CACAAGCACATGGTGGTCATTGCTTCCGAGGTGTGCGGGCTTAACGCAATTTTGCCCGACCGCGATGTGGCGGAAGATAT
TTACCCGCATGAGCGGGAGATGGTGATAATCGGCAATGATCTGGCGGTGCAGAGATGGAATCAGTAA

Upstream 100 bases:

>100_bases
CTTTCATCCTGACCATCCATTTGTATGTATATACCAGTGTTGCGGTTGCCGCGTATTGCGGACCGGTCTTCTCGCGGCAC
TTTCTATCGAGGTTACGACG

Downstream 100 bases:

>100_bases
AAACTCAGGATGTCAGCGTCAATGATCTGTGCTGGAAGATAGATTACCGGCCGGACCTGTGTACCAGATGCGGTTCCTGT
GTGGCTGCCTGCACTTTTGC

Product: putative glutamate synthase, large subunit (domain 1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MCRIGAIKSSMPVSPSVALNLMLPQQEGHDNSGFAMIMQDLEGVFSHYKDKPLLSLACTPQGVQLVNDFMEKKGFVQVAQ
WVPDVDRQPGLKVEAMPRYIFRNYDYPEIYRYRMQQDRDDLLLDTRLALRALLAKNNDGFVYSFWPDTLTLKEIGDPADI
ATYFRLWNDDERLTAKNIVVQCRQNTNYDIVRYAAHPFFIQGYTVCANGENTFFTRNKELQSALHRGYVGFESDSQTLLY
TLHYVLHELEWPVKYFKHVITPLPFTEAEQRADGKVLALIRESLAHLEINGPNAIIALLPDGNMMTCCDSKKLRPVVVGR
HKHMVVIASEVCGLNAILPDRDVAEDIYPHEREMVIIGNDLAVQRWNQ

Sequences:

>Translated_368_residues
MCRIGAIKSSMPVSPSVALNLMLPQQEGHDNSGFAMIMQDLEGVFSHYKDKPLLSLACTPQGVQLVNDFMEKKGFVQVAQ
WVPDVDRQPGLKVEAMPRYIFRNYDYPEIYRYRMQQDRDDLLLDTRLALRALLAKNNDGFVYSFWPDTLTLKEIGDPADI
ATYFRLWNDDERLTAKNIVVQCRQNTNYDIVRYAAHPFFIQGYTVCANGENTFFTRNKELQSALHRGYVGFESDSQTLLY
TLHYVLHELEWPVKYFKHVITPLPFTEAEQRADGKVLALIRESLAHLEINGPNAIIALLPDGNMMTCCDSKKLRPVVVGR
HKHMVVIASEVCGLNAILPDRDVAEDIYPHEREMVIIGNDLAVQRWNQ
>Mature_368_residues
MCRIGAIKSSMPVSPSVALNLMLPQQEGHDNSGFAMIMQDLEGVFSHYKDKPLLSLACTPQGVQLVNDFMEKKGFVQVAQ
WVPDVDRQPGLKVEAMPRYIFRNYDYPEIYRYRMQQDRDDLLLDTRLALRALLAKNNDGFVYSFWPDTLTLKEIGDPADI
ATYFRLWNDDERLTAKNIVVQCRQNTNYDIVRYAAHPFFIQGYTVCANGENTFFTRNKELQSALHRGYVGFESDSQTLLY
TLHYVLHELEWPVKYFKHVITPLPFTEAEQRADGKVLALIRESLAHLEINGPNAIIALLPDGNMMTCCDSKKLRPVVVGR
HKHMVVIASEVCGLNAILPDRDVAEDIYPHEREMVIIGNDLAVQRWNQ

Specific function: Unknown

COG id: COG0067

COG function: function code E; Glutamate synthase domain 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000583
- InterPro:   IPR017932
- InterPro:   IPR012375 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 42157; Mature: 42157

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRIGAIKSSMPVSPSVALNLMLPQQEGHDNSGFAMIMQDLEGVFSHYKDKPLLSLACTP
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC
QGVQLVNDFMEKKGFVQVAQWVPDVDRQPGLKVEAMPRYIFRNYDYPEIYRYRMQQDRDD
CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCHHHHCCCCCHHHHHHHHHCCCCH
LLLDTRLALRALLAKNNDGFVYSFWPDTLTLKEIGDPADIATYFRLWNDDERLTAKNIVV
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCHHHHHHHHHCCCCCCEEHEEEEE
QCRQNTNYDIVRYAAHPFFIQGYTVCANGENTFFTRNKELQSALHRGYVGFESDSQTLLY
EECCCCCCCEEEEECCCEEEEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHH
TLHYVLHELEWPVKYFKHVITPLPFTEAEQRADGKVLALIRESLAHLEINGPNAIIALLP
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHEEEECCCCEEEEEEC
DGNMMTCCDSKKLRPVVVGRHKHMVVIASEVCGLNAILPDRDVAEDIYPHEREMVIIGND
CCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEECC
LAVQRWNQ
EEECCCCC
>Mature Secondary Structure
MCRIGAIKSSMPVSPSVALNLMLPQQEGHDNSGFAMIMQDLEGVFSHYKDKPLLSLACTP
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC
QGVQLVNDFMEKKGFVQVAQWVPDVDRQPGLKVEAMPRYIFRNYDYPEIYRYRMQQDRDD
CHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEECCCHHHHCCCCCHHHHHHHHHCCCCH
LLLDTRLALRALLAKNNDGFVYSFWPDTLTLKEIGDPADIATYFRLWNDDERLTAKNIVV
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHCCCCHHHHHHHHHCCCCCCEEHEEEEE
QCRQNTNYDIVRYAAHPFFIQGYTVCANGENTFFTRNKELQSALHRGYVGFESDSQTLLY
EECCCCCCCEEEEECCCEEEEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHH
TLHYVLHELEWPVKYFKHVITPLPFTEAEQRADGKVLALIRESLAHLEINGPNAIIALLP
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHEEEECCCCEEEEEEC
DGNMMTCCDSKKLRPVVVGRHKHMVVIASEVCGLNAILPDRDVAEDIYPHEREMVIIGND
CCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEECC
LAVQRWNQ
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]