Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904410
Identifier: 220904410
GI number: 220904410
Start: 1341670
End: 1342857
Strand: Reverse
Name: 220904410
Synonym: Ddes_1140
Alternate gene names: NA
Gene position: 1342857-1341670 (Counterclockwise)
Preceding gene: 220904411
Following gene: 220904406
Centisome position: 46.73
GC content: 51.85
Gene sequence:
>1188_bases ATGGCGTCAGTAAAAATAACTGTTGCCGACATCGTACCCGGGATGTATCTCGTCAATCCCGGCCTTTCATGGATCAAGGC CCCTCTAGTGTATATGGAAGAAGGGCTTATCACGTCACGTGAAGAGATCGACCATATTATCAGCCAGGGCTACACAGAAG CCTATCACGACCCTTCACGTTTTCGCCAGATGGATGAGCTCGTAACCGCTCAGGAAGAAGATGTCTGGCCTGATCCCAAG GCCCCCCTGGTCTCTCTGGACGAAGAAATCCCCAAAGCCACTGCAATCTATGCAGACTCTTTTGACCATGTGCGCAGCCT CATGCAGGCCGCACAAGGGGGTGCTATTGATGTTGCGGCTTCCCAGCCTTACGTAGAATCCATTGTCAACAGCCTTAACC GCAATGTGGACGCGCTTGTTTCACTGTCCAAGCTCAAAAGTTCTGACGAATATACCTTTACTCATTCGGTCAATGTGACC ATCTTTGCAGTGGCCTATGCGCATTACCTTGGCCTGCCTGAAGAAAAACTTCATCTGGTGGGCATGGCCGGTCTGTTTCA CGATTTTGGCAAGGCGTTCATTCCGCAGGAGATTCTCAATGCTCCGCGCAGGCTTACGCCCAACGAACAAGAGATCATGC AGTCTCATGTGATTCTGGGCTATAATCAGCTGAAAAAGGCAGACAACATGCCTCCGGAGGTTTTGCAGGCTGTTGCGCAG CACCATGAGAAGCATAACGGCACAGGATATCCCTATCGGCTGGCAGGAAAAAAGATCGGCATCTACGGACGCATTCTTTC AGTAAGCGACAACTATGACGCCCTTTCGGCCAAGCGGGTGTACAAAACCCCCATGCCGGCCAATGTTGCCCTGGCTGTCA TGTACAAGATGCGCGGTCAGGCCTGGGCTCCAGGTTATGTGGAGCGCTTCATCAAGATGATGGGCATTTATCCCGTTGGT ACGCCGGTACAGCTATCCAGCGGCGAACAGGGTATTGTTTGCCGCTCAAACCCCAGCTTTCCCGCACAGCCCTGCGTTAT CATAGCCTTTGACCCTCTCGGCAGATCTATCAGTCCGGCATTTCTGGACCTGAGCAAAGAGCACGGACTTGAGATTGAGC GCTCCCTTACTGGGATTGATGCCGAAAAAATGGATATTACAGCGCTTTTGTCTCAGGCTTGGCAATAA
Upstream 100 bases:
>100_bases CCTTCGGGCTTGATTGGGACATTGGCTAATCCCCCTCATATTTGAAAACCCGGCCACGGTAGCATAGTACCGTGGCCGGC CATATAGGGTATTTTTAGCC
Downstream 100 bases:
>100_bases GGCCATGCTCCCCGTCCTGTTTCGGCGGCCGCGCGAGCAGGCGTTCGCCGCAATGGCCGATTGCTTCAGTCCCTGCGGAG TACTTGTGGACGGAGCTTGC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MASVKITVADIVPGMYLVNPGLSWIKAPLVYMEEGLITSREEIDHIISQGYTEAYHDPSRFRQMDELVTAQEEDVWPDPK APLVSLDEEIPKATAIYADSFDHVRSLMQAAQGGAIDVAASQPYVESIVNSLNRNVDALVSLSKLKSSDEYTFTHSVNVT IFAVAYAHYLGLPEEKLHLVGMAGLFHDFGKAFIPQEILNAPRRLTPNEQEIMQSHVILGYNQLKKADNMPPEVLQAVAQ HHEKHNGTGYPYRLAGKKIGIYGRILSVSDNYDALSAKRVYKTPMPANVALAVMYKMRGQAWAPGYVERFIKMMGIYPVG TPVQLSSGEQGIVCRSNPSFPAQPCVIIAFDPLGRSISPAFLDLSKEHGLEIERSLTGIDAEKMDITALLSQAWQ
Sequences:
>Translated_395_residues MASVKITVADIVPGMYLVNPGLSWIKAPLVYMEEGLITSREEIDHIISQGYTEAYHDPSRFRQMDELVTAQEEDVWPDPK APLVSLDEEIPKATAIYADSFDHVRSLMQAAQGGAIDVAASQPYVESIVNSLNRNVDALVSLSKLKSSDEYTFTHSVNVT IFAVAYAHYLGLPEEKLHLVGMAGLFHDFGKAFIPQEILNAPRRLTPNEQEIMQSHVILGYNQLKKADNMPPEVLQAVAQ HHEKHNGTGYPYRLAGKKIGIYGRILSVSDNYDALSAKRVYKTPMPANVALAVMYKMRGQAWAPGYVERFIKMMGIYPVG TPVQLSSGEQGIVCRSNPSFPAQPCVIIAFDPLGRSISPAFLDLSKEHGLEIERSLTGIDAEKMDITALLSQAWQ >Mature_394_residues ASVKITVADIVPGMYLVNPGLSWIKAPLVYMEEGLITSREEIDHIISQGYTEAYHDPSRFRQMDELVTAQEEDVWPDPKA PLVSLDEEIPKATAIYADSFDHVRSLMQAAQGGAIDVAASQPYVESIVNSLNRNVDALVSLSKLKSSDEYTFTHSVNVTI FAVAYAHYLGLPEEKLHLVGMAGLFHDFGKAFIPQEILNAPRRLTPNEQEIMQSHVILGYNQLKKADNMPPEVLQAVAQH HEKHNGTGYPYRLAGKKIGIYGRILSVSDNYDALSAKRVYKTPMPANVALAVMYKMRGQAWAPGYVERFIKMMGIYPVGT PVQLSSGEQGIVCRSNPSFPAQPCVIIAFDPLGRSISPAFLDLSKEHGLEIERSLTGIDAEKMDITALLSQAWQ
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43689; Mature: 43557
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVKITVADIVPGMYLVNPGLSWIKAPLVYMEEGLITSREEIDHIISQGYTEAYHDPSR CCEEEEEHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCHHH FRQMDELVTAQEEDVWPDPKAPLVSLDEEIPKATAIYADSFDHVRSLMQAAQGGAIDVAA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEEC SQPYVESIVNSLNRNVDALVSLSKLKSSDEYTFTHSVNVTIFAVAYAHYLGLPEEKLHLV CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHCCCHHHHHHH GMAGLFHDFGKAFIPQEILNAPRRLTPNEQEIMQSHVILGYNQLKKADNMPPEVLQAVAQ HHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH HHEKHNGTGYPYRLAGKKIGIYGRILSVSDNYDALSAKRVYKTPMPANVALAVMYKMRGQ HHHHCCCCCCCEEECCCEEEEEEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCC AWAPGYVERFIKMMGIYPVGTPVQLSSGEQGIVCRSNPSFPAQPCVIIAFDPLGRSISPA CCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHH FLDLSKEHGLEIERSLTGIDAEKMDITALLSQAWQ HHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ASVKITVADIVPGMYLVNPGLSWIKAPLVYMEEGLITSREEIDHIISQGYTEAYHDPSR CEEEEEHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCCCHHH FRQMDELVTAQEEDVWPDPKAPLVSLDEEIPKATAIYADSFDHVRSLMQAAQGGAIDVAA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEEC SQPYVESIVNSLNRNVDALVSLSKLKSSDEYTFTHSVNVTIFAVAYAHYLGLPEEKLHLV CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEHHHHHHHHHCCCHHHHHHH GMAGLFHDFGKAFIPQEILNAPRRLTPNEQEIMQSHVILGYNQLKKADNMPPEVLQAVAQ HHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHH HHEKHNGTGYPYRLAGKKIGIYGRILSVSDNYDALSAKRVYKTPMPANVALAVMYKMRGQ HHHHCCCCCCCEEECCCEEEEEEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCC AWAPGYVERFIKMMGIYPVGTPVQLSSGEQGIVCRSNPSFPAQPCVIIAFDPLGRSISPA CCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHH FLDLSKEHGLEIERSLTGIDAEKMDITALLSQAWQ HHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]