| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904408
Identifier: 220904408
GI number: 220904408
Start: 1338965
End: 1340575
Strand: Direct
Name: 220904408
Synonym: Ddes_1138
Alternate gene names: NA
Gene position: 1338965-1340575 (Clockwise)
Preceding gene: 220904407
Following gene: 220904409
Centisome position: 46.6
GC content: 57.73
Gene sequence:
>1611_bases ATGCATACAAGGGAAAAAACACAAAGCAGAATTCGTACACATGCAGCCGCTTCAGGCATAAGGGCTGCCCTGCTGGCCTT GCTGCTGGCAGTGATGGCAACCGGCAGCGCCTTGGCTGCCCAGGAAAAATCCTCTTCCGCCCCCATTGTCCCGGCATCTC CTGCCAGCCCGGTAGCAGCTATCCTTTCCCCCTCGGGCGGGCTGGTGCAGGTTGAAGAAACCCTGCCCGTCGTTATGAAT GACGATATGGGGATCCTGAGCTTTGTGCTGCCTGGTGGTGCGGAAAATCTTCAGATCAGCGTTCCCGGTCATACCATTGC CCGCTGGACCTCCACCCCCCAGGCGTTGGAGCGTAAAGGGCATCTGGCCCATCTGCGGGCTGAATTGAGCACCGAAATAA ATCAGGTCAACGGCAAGCTGGCCGCAGTCAAGGCTCAACTGGCCCTGTGGGAAACCCCGCCCGGCAGCAGCTCGTATCAG GACCTGACACAAAGAGAAAAAAAGCAGAGCAGCGCCATTCCCGAGCTGATCATTGAACAGGCTAACCTTGAAAGCCTGGT CGCAGTGCTCCGCCAGCAGTTGGATCAGATGCCGCTAAGCCCTGAAATGGGACAGCGTATCACCATCGCCCTGCGCAAAC CCGTAACCGGCAAACAGTTGAAGGTGGCGTACAGCTATCAGTTGAACAACTGCGGCTGGCGCCCTGTATACAGCTTTGAT GCCAGAACCGGCAGCGGCAAGAGCAATGAAACTTCCGTGCGGCTCATGGCCGAGATATGGCAGCTTTCCGGCATTGACTG GAGTGGCGCGCAGCTTACCCTCATTTCACGCGGTGAAGGCCCACGTGAGCCTGCGAGTCTGGGCAGATGGGTGATAGATT CCCAAGTCCCTGTTCCCCAGCCTGCCCGCGCAGCGCGCAAGACTTTTACCCGGGAGGCCGCAGTGGCGCTGTCGGTCGAG GCAGATGCTGTGCCTGCAGAACCCCCGGTCGTACATGACGGCAGTGCAGTTTTTGCGCGCTGGAACCTGGCTGTGCGTGG TCTGCCCGAAGGGCGTTCGCGACTGCTTATTGTTGAAGATATGTGGAAAACGCCTTTGCAGTGGCTGGCCCGCCCCATTG TGGGCGACAGCCGTGTGTGGCTTATGGGCAAATACAGCCTGCCGTCCGAACAGTCATGGCCGGACGGCGCAGCCGAATTC TGCGTAGATGGTCAGGGCGTTGGACAAGGATTTTTTACCCCGCGCGGTGGAGAGGCGACCCTGTACTTCGGTCCCGACCC CCGTGTGCATGTTAACGTGATCGTGGACAGCAAGCGGCGGGGCGAAAGCGGTTTTATAGAAAAAAGCCGTACCTGGACCT GGGCATGGACCTATGTGCTGACGAATACGCACAAGGACGCCATTAACGTACGGGTGGAGCGGCCCATGCCAATGATTGTC GATCAGGGTGTGTCTGTTTCCTATAATGATTCACCGGCTTCTCAGCAGGTGCCCGATGAGCACATGCTGCTGTGGAACAT TGAAGTGCCCGGCGATGGCAAGGCTGAAATAAAGCACTCCGTGTCCATCACGTCTTCCAAAGAAATGCCGATGCTTACCG ATATTCCTTAA
Upstream 100 bases:
>100_bases CCGATACGCCGCACCGCCTCAAATTCCGCAAACTGACACGATGAGCCTTGCCCCCCGCGTCGGACAATCCGGCGCGGGGG CTGATCGCTCCGGAGGGCAG
Downstream 100 bases:
>100_bases GGAATGTGCAGGTTTTGATTCGTGCGATACAAGGCCGCCCCGTATTCGGGGCGGCCTTTGCAACAAAAGGCAGCATGGCT GTCCGTCAAAGGAGCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP
Sequences:
>Translated_536_residues MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP >Mature_536_residues MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58333; Mature: 58333
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEE ILSPSGGLVQVEETLPVVMNDDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKG EECCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHCC HLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQDLTQREKKQSSAIPELIIEQ CHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH ANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEC ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQ CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCCCCCCC PARAARKTFTREAAVALSVEADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVED CHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCCCEEEEEHH MWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEFCVDGQGVGQGFFTPRGGEAT HHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCEE LYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV EEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEE DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEECCCC >Mature Secondary Structure MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEE ILSPSGGLVQVEETLPVVMNDDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKG EECCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHCC HLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQDLTQREKKQSSAIPELIIEQ CHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH ANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEC ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQ CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCCCCCCC PARAARKTFTREAAVALSVEADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVED CHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCCCEEEEEHH MWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEFCVDGQGVGQGFFTPRGGEAT HHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCEE LYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV EEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEE DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA