Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904408

Identifier: 220904408

GI number: 220904408

Start: 1338965

End: 1340575

Strand: Direct

Name: 220904408

Synonym: Ddes_1138

Alternate gene names: NA

Gene position: 1338965-1340575 (Clockwise)

Preceding gene: 220904407

Following gene: 220904409

Centisome position: 46.6

GC content: 57.73

Gene sequence:

>1611_bases
ATGCATACAAGGGAAAAAACACAAAGCAGAATTCGTACACATGCAGCCGCTTCAGGCATAAGGGCTGCCCTGCTGGCCTT
GCTGCTGGCAGTGATGGCAACCGGCAGCGCCTTGGCTGCCCAGGAAAAATCCTCTTCCGCCCCCATTGTCCCGGCATCTC
CTGCCAGCCCGGTAGCAGCTATCCTTTCCCCCTCGGGCGGGCTGGTGCAGGTTGAAGAAACCCTGCCCGTCGTTATGAAT
GACGATATGGGGATCCTGAGCTTTGTGCTGCCTGGTGGTGCGGAAAATCTTCAGATCAGCGTTCCCGGTCATACCATTGC
CCGCTGGACCTCCACCCCCCAGGCGTTGGAGCGTAAAGGGCATCTGGCCCATCTGCGGGCTGAATTGAGCACCGAAATAA
ATCAGGTCAACGGCAAGCTGGCCGCAGTCAAGGCTCAACTGGCCCTGTGGGAAACCCCGCCCGGCAGCAGCTCGTATCAG
GACCTGACACAAAGAGAAAAAAAGCAGAGCAGCGCCATTCCCGAGCTGATCATTGAACAGGCTAACCTTGAAAGCCTGGT
CGCAGTGCTCCGCCAGCAGTTGGATCAGATGCCGCTAAGCCCTGAAATGGGACAGCGTATCACCATCGCCCTGCGCAAAC
CCGTAACCGGCAAACAGTTGAAGGTGGCGTACAGCTATCAGTTGAACAACTGCGGCTGGCGCCCTGTATACAGCTTTGAT
GCCAGAACCGGCAGCGGCAAGAGCAATGAAACTTCCGTGCGGCTCATGGCCGAGATATGGCAGCTTTCCGGCATTGACTG
GAGTGGCGCGCAGCTTACCCTCATTTCACGCGGTGAAGGCCCACGTGAGCCTGCGAGTCTGGGCAGATGGGTGATAGATT
CCCAAGTCCCTGTTCCCCAGCCTGCCCGCGCAGCGCGCAAGACTTTTACCCGGGAGGCCGCAGTGGCGCTGTCGGTCGAG
GCAGATGCTGTGCCTGCAGAACCCCCGGTCGTACATGACGGCAGTGCAGTTTTTGCGCGCTGGAACCTGGCTGTGCGTGG
TCTGCCCGAAGGGCGTTCGCGACTGCTTATTGTTGAAGATATGTGGAAAACGCCTTTGCAGTGGCTGGCCCGCCCCATTG
TGGGCGACAGCCGTGTGTGGCTTATGGGCAAATACAGCCTGCCGTCCGAACAGTCATGGCCGGACGGCGCAGCCGAATTC
TGCGTAGATGGTCAGGGCGTTGGACAAGGATTTTTTACCCCGCGCGGTGGAGAGGCGACCCTGTACTTCGGTCCCGACCC
CCGTGTGCATGTTAACGTGATCGTGGACAGCAAGCGGCGGGGCGAAAGCGGTTTTATAGAAAAAAGCCGTACCTGGACCT
GGGCATGGACCTATGTGCTGACGAATACGCACAAGGACGCCATTAACGTACGGGTGGAGCGGCCCATGCCAATGATTGTC
GATCAGGGTGTGTCTGTTTCCTATAATGATTCACCGGCTTCTCAGCAGGTGCCCGATGAGCACATGCTGCTGTGGAACAT
TGAAGTGCCCGGCGATGGCAAGGCTGAAATAAAGCACTCCGTGTCCATCACGTCTTCCAAAGAAATGCCGATGCTTACCG
ATATTCCTTAA

Upstream 100 bases:

>100_bases
CCGATACGCCGCACCGCCTCAAATTCCGCAAACTGACACGATGAGCCTTGCCCCCCGCGTCGGACAATCCGGCGCGGGGG
CTGATCGCTCCGGAGGGCAG

Downstream 100 bases:

>100_bases
GGAATGTGCAGGTTTTGATTCGTGCGATACAAGGCCGCCCCGTATTCGGGGCGGCCTTTGCAACAAAAGGCAGCATGGCT
GTCCGTCAAAGGAGCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN
DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ
DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD
ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE
ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF
CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV
DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP

Sequences:

>Translated_536_residues
MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN
DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ
DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD
ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE
ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF
CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV
DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP
>Mature_536_residues
MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAAILSPSGGLVQVEETLPVVMN
DDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKGHLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQ
DLTQREKKQSSAIPELIIEQANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD
ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQPARAARKTFTREAAVALSVE
ADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVEDMWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEF
CVDGQGVGQGFFTPRGGEATLYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV
DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58333; Mature: 58333

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEE
ILSPSGGLVQVEETLPVVMNDDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKG
EECCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHCC
HLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQDLTQREKKQSSAIPELIIEQ
CHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH
ANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEC
ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCCCCCCC
PARAARKTFTREAAVALSVEADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVED
CHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCCCEEEEEHH
MWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEFCVDGQGVGQGFFTPRGGEAT
HHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCEE
LYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV
EEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEE
DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP
CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEECCCC
>Mature Secondary Structure
MHTREKTQSRIRTHAAASGIRAALLALLLAVMATGSALAAQEKSSSAPIVPASPASPVAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEE
ILSPSGGLVQVEETLPVVMNDDMGILSFVLPGGAENLQISVPGHTIARWTSTPQALERKG
EECCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHCC
HLAHLRAELSTEINQVNGKLAAVKAQLALWETPPGSSSYQDLTQREKKQSSAIPELIIEQ
CHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH
ANLESLVAVLRQQLDQMPLSPEMGQRITIALRKPVTGKQLKVAYSYQLNNCGWRPVYSFD
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEC
ARTGSGKSNETSVRLMAEIWQLSGIDWSGAQLTLISRGEGPREPASLGRWVIDSQVPVPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHCCEEECCCCCCCC
PARAARKTFTREAAVALSVEADAVPAEPPVVHDGSAVFARWNLAVRGLPEGRSRLLIVED
CHHHHHHHHHHHEEEEEEEECCCCCCCCCEEECCCEEEEEEEEEEECCCCCCCEEEEEHH
MWKTPLQWLARPIVGDSRVWLMGKYSLPSEQSWPDGAAEFCVDGQGVGQGFFTPRGGEAT
HHCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCEE
LYFGPDPRVHVNVIVDSKRRGESGFIEKSRTWTWAWTYVLTNTHKDAINVRVERPMPMIV
EEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEE
DQGVSVSYNDSPASQQVPDEHMLLWNIEVPGDGKAEIKHSVSITSSKEMPMLTDIP
CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA