Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is pgl [H]
Identifier: 220904401
GI number: 220904401
Start: 1331360
End: 1332106
Strand: Reverse
Name: pgl [H]
Synonym: Ddes_1131
Alternate gene names: 220904401
Gene position: 1332106-1331360 (Counterclockwise)
Preceding gene: 220904402
Following gene: 220904398
Centisome position: 46.36
GC content: 60.24
Gene sequence:
>747_bases ATGTCGGGCCTCAGCCGATCCATCCATCTTACGGTGCACATTCATAAAGACCCGGCCGCCATGGCCGAGCGCGCCGCACA TATTCTTGCCGCCGCTTGCGAAGAGGCTGTTGCTGAAAGGGGTGTATTCCGCATTGCCCTGTCCGGCGGGCAGACTCCCA TTCCTCTTTTCCGGCTGCTTGCCGGTGACGACTGGGCCGACCGGCTGCCCTGGGACAAGATAAGCATTTTCTGGGTGGAC GAACGTTGCGTGGGGCCGGAACATGCCGACAGTAACTACGGCCTGGCCCGCAGGGAATTTCTCGGACATGTCCCGGCTAC GCATTTTTACCGCATGCGCGGCGAAGAAGATCCTGTAGAAGCTGCCGTCAAGTATGAAGGACAGCTCCGTGCCGAATTCG ACCTTGGACCGCAGGACCTCCCCCGGTTTGACTTTATGCTGCTTGGCATGGGCGAAGACGGGCATACCGGTTCCATTTTC CCCCATTCCCCAGCCCTTGCGGAAAAGAAGCGGCTGGTTATTGACCAGTACGTTCCGGAACGCAAGGCCGACCGCCTTAC CCTCACCCTGCCGGTGATCAACAATGCCCGCTGCTGCATGTTCCTTGTGACAGGGGCCGAAAAACATGATGTGCTCTCCC GCGCCCTCAACCTGCTGGCTCCGCCCACACTGCCCGCCCAGATGGTGCGACCCGGCTTTGGCGAGCTTGTATGGGTCGTG GATGAAGCTGCGGCCACAGGCGTATAG
Upstream 100 bases:
>100_bases AGGCCGGAAATTCCCGGCTGCCAGGACGCGTTTTGCAGGCAAGTTCCCGCAAAACGGCCATGTAGGCCGTTTCCATCGTC AACTTTGAAGGAGCCGCCAC
Downstream 100 bases:
>100_bases CCTGAAAACATCATAAATCTTAGTGTGTTGTGCCAAAATGCGAAGAGGCTGCATCCTCTCTAGGAGCTGGCTTTCACCAG GAAAGACAAGAGAACTCCCC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSGLSRSIHLTVHIHKDPAAMAERAAHILAAACEEAVAERGVFRIALSGGQTPIPLFRLLAGDDWADRLPWDKISIFWVD ERCVGPEHADSNYGLARREFLGHVPATHFYRMRGEEDPVEAAVKYEGQLRAEFDLGPQDLPRFDFMLLGMGEDGHTGSIF PHSPALAEKKRLVIDQYVPERKADRLTLTLPVINNARCCMFLVTGAEKHDVLSRALNLLAPPTLPAQMVRPGFGELVWVV DEAAATGV
Sequences:
>Translated_248_residues MSGLSRSIHLTVHIHKDPAAMAERAAHILAAACEEAVAERGVFRIALSGGQTPIPLFRLLAGDDWADRLPWDKISIFWVD ERCVGPEHADSNYGLARREFLGHVPATHFYRMRGEEDPVEAAVKYEGQLRAEFDLGPQDLPRFDFMLLGMGEDGHTGSIF PHSPALAEKKRLVIDQYVPERKADRLTLTLPVINNARCCMFLVTGAEKHDVLSRALNLLAPPTLPAQMVRPGFGELVWVV DEAAATGV >Mature_247_residues SGLSRSIHLTVHIHKDPAAMAERAAHILAAACEEAVAERGVFRIALSGGQTPIPLFRLLAGDDWADRLPWDKISIFWVDE RCVGPEHADSNYGLARREFLGHVPATHFYRMRGEEDPVEAAVKYEGQLRAEFDLGPQDLPRFDFMLLGMGEDGHTGSIFP HSPALAEKKRLVIDQYVPERKADRLTLTLPVINNARCCMFLVTGAEKHDVLSRALNLLAPPTLPAQMVRPGFGELVWVVD EAAATGV
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=229, Percent_Identity=38.4279475982533, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI52145310, Length=240, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533058, Length=218, Percent_Identity=33.4862385321101, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI115533060, Length=218, Percent_Identity=33.4862385321101, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321957, Length=245, Percent_Identity=31.8367346938775, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324362, Length=218, Percent_Identity=34.4036697247706, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6319918, Length=220, Percent_Identity=34.5454545454545, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6321687, Length=227, Percent_Identity=31.2775330396476, Blast_Score=82, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641119, Length=240, Percent_Identity=35.8333333333333, Blast_Score=121, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 27397; Mature: 27266
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLSRSIHLTVHIHKDPAAMAERAAHILAAACEEAVAERGVFRIALSGGQTPIPLFRLL CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AGDDWADRLPWDKISIFWVDERCVGPEHADSNYGLARREFLGHVPATHFYRMRGEEDPVE CCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEEECCCCCCHH AAVKYEGQLRAEFDLGPQDLPRFDFMLLGMGEDGHTGSIFPHSPALAEKKRLVIDQYVPE HHEEECCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RKADRLTLTLPVINNARCCMFLVTGAEKHDVLSRALNLLAPPTLPAQMVRPGFGELVWVV CCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEE DEAAATGV ECHHHCCC >Mature Secondary Structure SGLSRSIHLTVHIHKDPAAMAERAAHILAAACEEAVAERGVFRIALSGGQTPIPLFRLL CCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AGDDWADRLPWDKISIFWVDERCVGPEHADSNYGLARREFLGHVPATHFYRMRGEEDPVE CCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHEEEECCCCCCHH AAVKYEGQLRAEFDLGPQDLPRFDFMLLGMGEDGHTGSIFPHSPALAEKKRLVIDQYVPE HHEEECCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RKADRLTLTLPVINNARCCMFLVTGAEKHDVLSRALNLLAPPTLPAQMVRPGFGELVWVV CCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEE DEAAATGV ECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]