| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904400
Identifier: 220904400
GI number: 220904400
Start: 1330237
End: 1331076
Strand: Direct
Name: 220904400
Synonym: Ddes_1130
Alternate gene names: NA
Gene position: 1330237-1331076 (Clockwise)
Preceding gene: 220904399
Following gene: 220904407
Centisome position: 46.29
GC content: 53.1
Gene sequence:
>840_bases ATGCGCGGATTATTGATGACCATGCTGTGTGCGGCGATGCTGCTTGCCGGCTGTGGGGCTGGAAGCGGCGGCCATGCCGC CGGAGGCGCTGTAAGTTTGTCGCCGACTGTACAAAACGGCAATACCAACCAGTATAACCCGCATCTGCACCAGAATATGC CAAACATGCGTTCGGCCACGGCCGAAGGCGCAGCCATGCTTCAAAAAATGGGCGGCAGTGTTCCTACCATCGAAGGCGAG GCTGCACACCGTCCACAGTGGAAACATGAAGTTTATCCTGTAGTTTTTGGCGACCCCACTGCACCGCACGAAGTTCTTGT ATTGCTTGATTTTGCCGCGCCGCAGAGTGAAAAAGTATGGCAGGCTGTTGTCGATGCCAGCCGGTCCCTTTCTCCCCAGC AGTGCAAAATTGCAGTTTTTGCCAACAGCAAGGAATATTACGGAACGGACCTTATGGGGCTGGCTATCTGGATTACCCAC TCACGCCAGGGACAGGCCATGCCGTACCTGACGTATGCGTTGGGGCAGTGGAACAAGGTCAAGGCCGAGCAAAAAAGCAC CCGTGGACGTGCAGTGCCTTTTCAGAATGAATATGACGCCACTGTAAAAAATACGGATTACCCCATCCACTATGCCTATC TTTCACACCTGCGGCCGCCGGTTCCTGCAAGTCAGGAACTTAGCGTGGCAAGGTATTGCTACGATGCCGGAAATGTTAAT CTTTACCAGGCTGAGCAGATAAGCAGATATTATGGCATCAAGAACCTGCCCGCCGTTATTGTGGATGGTCAGGCGCTTTC TTCCGTATCCGCTGCCTCAATCCTTAAAGCTTTACAGTAA
Upstream 100 bases:
>100_bases TGTTGAAAGGTACGGCGGAATACGCCGGTTTTGCTGAGATATGGTTGCGCCACCTGGAGGCTGCCGCCCAGTCCTGTTTT GAATCTGTATGAGGTAATTT
Downstream 100 bases:
>100_bases CAAAAACTGCCAGGCAGGGCACCCGGCGAAGCATATGTGCAAAAACTTCGCGTATGCGGGTACAAGCAGCGCAAAACAAT CGGCCAGTTTTTCCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRGLLMTMLCAAMLLAGCGAGSGGHAAGGAVSLSPTVQNGNTNQYNPHLHQNMPNMRSATAEGAAMLQKMGGSVPTIEGE AAHRPQWKHEVYPVVFGDPTAPHEVLVLLDFAAPQSEKVWQAVVDASRSLSPQQCKIAVFANSKEYYGTDLMGLAIWITH SRQGQAMPYLTYALGQWNKVKAEQKSTRGRAVPFQNEYDATVKNTDYPIHYAYLSHLRPPVPASQELSVARYCYDAGNVN LYQAEQISRYYGIKNLPAVIVDGQALSSVSAASILKALQ
Sequences:
>Translated_279_residues MRGLLMTMLCAAMLLAGCGAGSGGHAAGGAVSLSPTVQNGNTNQYNPHLHQNMPNMRSATAEGAAMLQKMGGSVPTIEGE AAHRPQWKHEVYPVVFGDPTAPHEVLVLLDFAAPQSEKVWQAVVDASRSLSPQQCKIAVFANSKEYYGTDLMGLAIWITH SRQGQAMPYLTYALGQWNKVKAEQKSTRGRAVPFQNEYDATVKNTDYPIHYAYLSHLRPPVPASQELSVARYCYDAGNVN LYQAEQISRYYGIKNLPAVIVDGQALSSVSAASILKALQ >Mature_279_residues MRGLLMTMLCAAMLLAGCGAGSGGHAAGGAVSLSPTVQNGNTNQYNPHLHQNMPNMRSATAEGAAMLQKMGGSVPTIEGE AAHRPQWKHEVYPVVFGDPTAPHEVLVLLDFAAPQSEKVWQAVVDASRSLSPQQCKIAVFANSKEYYGTDLMGLAIWITH SRQGQAMPYLTYALGQWNKVKAEQKSTRGRAVPFQNEYDATVKNTDYPIHYAYLSHLRPPVPASQELSVARYCYDAGNVN LYQAEQISRYYGIKNLPAVIVDGQALSSVSAASILKALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30225; Mature: 30225
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLLMTMLCAAMLLAGCGAGSGGHAAGGAVSLSPTVQNGNTNQYNPHLHQNMPNMRSAT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCCCCCCHHHHCCCCHHHHH AEGAAMLQKMGGSVPTIEGEAAHRPQWKHEVYPVVFGDPTAPHEVLVLLDFAAPQSEKVW HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHH QAVVDASRSLSPQQCKIAVFANSKEYYGTDLMGLAIWITHSRQGQAMPYLTYALGQWNKV HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCHHH KAEQKSTRGRAVPFQNEYDATVKNTDYPIHYAYLSHLRPPVPASQELSVARYCYDAGNVN HHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCE LYQAEQISRYYGIKNLPAVIVDGQALSSVSAASILKALQ EEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGLLMTMLCAAMLLAGCGAGSGGHAAGGAVSLSPTVQNGNTNQYNPHLHQNMPNMRSAT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEECCCCCCCCCCHHHHCCCCHHHHH AEGAAMLQKMGGSVPTIEGEAAHRPQWKHEVYPVVFGDPTAPHEVLVLLDFAAPQSEKVW HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHH QAVVDASRSLSPQQCKIAVFANSKEYYGTDLMGLAIWITHSRQGQAMPYLTYALGQWNKV HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCHHH KAEQKSTRGRAVPFQNEYDATVKNTDYPIHYAYLSHLRPPVPASQELSVARYCYDAGNVN HHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCE LYQAEQISRYYGIKNLPAVIVDGQALSSVSAASILKALQ EEHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA