Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904397
Identifier: 220904397
GI number: 220904397
Start: 1327076
End: 1328161
Strand: Reverse
Name: 220904397
Synonym: Ddes_1127
Alternate gene names: NA
Gene position: 1328161-1327076 (Counterclockwise)
Preceding gene: 220904398
Following gene: 220904394
Centisome position: 46.22
GC content: 57.37
Gene sequence:
>1086_bases ATGGCCGATCTGGCGGCTATTTCCGGTAAACTGGTGGAAACGGGCGTCAGTTACGGGGCCATCCCGTCGCTGTACAGGCC GCGCTATGACCGCATTCTGGATGCGGACCTTAACACCAGCGCTGATGAAATTGTTTTTGTGGTCATGCTGCCCGATGGCC CGCGCATATATCTGCAGCGCTATATGGTCTGGCATCAGGTTGTTAATGAACTTATTGACGACGTGGCCTACACCATCACC TACTGCCCCACCACAGGTACGCTCATGGCCTACGATGCCTCCATGGGCGGGCTTAATCTTATTTTTGATGTCGAAGGCCG CCTTTATGACGGCAACAGTGTGCTTATTGACCGCAATTCCGGCAGTCTCTGGCTTCAGGAAACCGGCATGGCTTTTGAAG GCCCCCTCATGGGCAGAGGACTGCCAACCATTCCGGTGTTCTGGACAACGTGGGGGGCCGCGCGCAGCGTCTTTCCCCAG GCATCCGTCATGGCCAAACCGGCAGGAAGCCGCCCGTACGGGCGCGACCCCTACGGGAACTACCAGCGCAAAGGCACCTA CTATGACAACGACAGGCTTATCTACCCGGTAGAACGCCTGGACAGGCGTTTTCCGCGCAAAACACATATGCTCTGCCTGG AATATGAAAACTACCTGCTGGCTATTGATGTGGCCTATGTGAAGGAAAAAGGGACAGTTAATTTCTTTGTAGGACCGCAC GCACTGCTGGCTGCCCATGACCCGCAACTGGATGTCGTGCGCGTGTTCAACCGGCAGATATGGGCTGAACCGTTTCTATT TGTCAGCCGTTACGGCAAACTGATGGATTTGAAGACACGGAGCGTCTGGGACCCGGCCACCGGAAAAGCCCTGGAAGGCA ACATGAAAGGGGCCGCCATGCCTGAATATTTCGGCGGCTATTCCATGTGGTTTGCCTGGTACAGCATCAACCCCGAAACG CTTACTGTTCCCGGGCCGGGTGAAGTGCCGGAAAATCTGCTTTCCCCTGATGCCCCGGGGCACGACAGCCCAGCCCCCGG CTCTGCTGCCACTCCCGCCGCCACAGGGCTTCCGCCAGCCCCCTGA
Upstream 100 bases:
>100_bases CTGCCGTTTGCAGGATATATTTGCGTTTTCTGCTTTGATTCTGCTGGCGTTGTGCACTCTGCTGCTCTCCCCTGCTGAAA GTCAGGCACGGCCCAAAAGC
Downstream 100 bases:
>100_bases CAGGATACGGCGATCAACTGTAACTATCCAGCCGCAAGTCTTTCAGGCGACAAGCTAAATCTGTGCCCGACTCATATAGA AGCTGACTTGCGGCAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MADLAAISGKLVETGVSYGAIPSLYRPRYDRILDADLNTSADEIVFVVMLPDGPRIYLQRYMVWHQVVNELIDDVAYTIT YCPTTGTLMAYDASMGGLNLIFDVEGRLYDGNSVLIDRNSGSLWLQETGMAFEGPLMGRGLPTIPVFWTTWGAARSVFPQ ASVMAKPAGSRPYGRDPYGNYQRKGTYYDNDRLIYPVERLDRRFPRKTHMLCLEYENYLLAIDVAYVKEKGTVNFFVGPH ALLAAHDPQLDVVRVFNRQIWAEPFLFVSRYGKLMDLKTRSVWDPATGKALEGNMKGAAMPEYFGGYSMWFAWYSINPET LTVPGPGEVPENLLSPDAPGHDSPAPGSAATPAATGLPPAP
Sequences:
>Translated_361_residues MADLAAISGKLVETGVSYGAIPSLYRPRYDRILDADLNTSADEIVFVVMLPDGPRIYLQRYMVWHQVVNELIDDVAYTIT YCPTTGTLMAYDASMGGLNLIFDVEGRLYDGNSVLIDRNSGSLWLQETGMAFEGPLMGRGLPTIPVFWTTWGAARSVFPQ ASVMAKPAGSRPYGRDPYGNYQRKGTYYDNDRLIYPVERLDRRFPRKTHMLCLEYENYLLAIDVAYVKEKGTVNFFVGPH ALLAAHDPQLDVVRVFNRQIWAEPFLFVSRYGKLMDLKTRSVWDPATGKALEGNMKGAAMPEYFGGYSMWFAWYSINPET LTVPGPGEVPENLLSPDAPGHDSPAPGSAATPAATGLPPAP >Mature_360_residues ADLAAISGKLVETGVSYGAIPSLYRPRYDRILDADLNTSADEIVFVVMLPDGPRIYLQRYMVWHQVVNELIDDVAYTITY CPTTGTLMAYDASMGGLNLIFDVEGRLYDGNSVLIDRNSGSLWLQETGMAFEGPLMGRGLPTIPVFWTTWGAARSVFPQA SVMAKPAGSRPYGRDPYGNYQRKGTYYDNDRLIYPVERLDRRFPRKTHMLCLEYENYLLAIDVAYVKEKGTVNFFVGPHA LLAAHDPQLDVVRVFNRQIWAEPFLFVSRYGKLMDLKTRSVWDPATGKALEGNMKGAAMPEYFGGYSMWFAWYSINPETL TVPGPGEVPENLLSPDAPGHDSPAPGSAATPAATGLPPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40044; Mature: 39913
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLAAISGKLVETGVSYGAIPSLYRPRYDRILDADLNTSADEIVFVVMLPDGPRIYLQR CCCCHHHCCHHHHCCCCCCCCCHHCCCCHHHEECCCCCCCCCCEEEEEEECCCCHHHHHH YMVWHQVVNELIDDVAYTITYCPTTGTLMAYDASMGGLNLIFDVEGRLYDGNSVLIDRNS HHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCEEEEEEECCEEECCCEEEEECCC GSLWLQETGMAFEGPLMGRGLPTIPVFWTTWGAARSVFPQASVMAKPAGSRPYGRDPYGN CCEEEEECCCEECCCCCCCCCCCCEEEEECCCHHHHCCCCHHEEECCCCCCCCCCCCCCC YQRKGTYYDNDRLIYPVERLDRRFPRKTHMLCLEYENYLLAIDVAYVKEKGTVNFFVGPH CCCCCCEECCCEEEECHHHHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCEEEEECCC ALLAAHDPQLDVVRVFNRQIWAEPFLFVSRYGKLMDLKTRSVWDPATGKALEGNMKGAAM EEEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCC PEYFGGYSMWFAWYSINPETLTVPGPGEVPENLLSPDAPGHDSPAPGSAATPAATGLPPA CHHHCCEEEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC P C >Mature Secondary Structure ADLAAISGKLVETGVSYGAIPSLYRPRYDRILDADLNTSADEIVFVVMLPDGPRIYLQR CCCHHHCCHHHHCCCCCCCCCHHCCCCHHHEECCCCCCCCCCEEEEEEECCCCHHHHHH YMVWHQVVNELIDDVAYTITYCPTTGTLMAYDASMGGLNLIFDVEGRLYDGNSVLIDRNS HHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCEEEEEEECCEEECCCEEEEECCC GSLWLQETGMAFEGPLMGRGLPTIPVFWTTWGAARSVFPQASVMAKPAGSRPYGRDPYGN CCEEEEECCCEECCCCCCCCCCCCEEEEECCCHHHHCCCCHHEEECCCCCCCCCCCCCCC YQRKGTYYDNDRLIYPVERLDRRFPRKTHMLCLEYENYLLAIDVAYVKEKGTVNFFVGPH CCCCCCEECCCEEEECHHHHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCEEEEECCC ALLAAHDPQLDVVRVFNRQIWAEPFLFVSRYGKLMDLKTRSVWDPATGKALEGNMKGAAM EEEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCC PEYFGGYSMWFAWYSINPETLTVPGPGEVPENLLSPDAPGHDSPAPGSAATPAATGLPPA CHHHCCEEEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA