| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is yqeY [H]
Identifier: 220904360
GI number: 220904360
Start: 1277214
End: 1277750
Strand: Reverse
Name: yqeY [H]
Synonym: Ddes_1088
Alternate gene names: 220904360
Gene position: 1277750-1277214 (Counterclockwise)
Preceding gene: 220904361
Following gene: 220904359
Centisome position: 44.47
GC content: 53.26
Gene sequence:
>537_bases ATGCGGGAAGCCCCTTTTGGGGGTTTCCCGCATTTTCTGCTTTACTCCACCCTTCACCACACCACTGCCATGACCGTTAC CACCACACTTTTTGAACAGATTGAAAAAAACTACGTTCAAGCCTACAAGGCCAGAGACAGTGTGCGCCTGACAGTGCTGC GCCTGTTGAAAACAGCGGTCAAAAACCGGCTGGTGGACCTGCGGCGACCTGGCGGCAGCCTTTCCGATGAAGAAATGCTT GATGTCATCGTAAAAGAAGGCAAGCAGCGGCAGGATTCCATTGAGCAATACACGGCCGCCCAGCGACCCGACCTTGCTGA AAAAGAGGCTGCGGAACTGGCCGTGCTCAAAGACTATCTGCCCAAGGCCCTTGGGCAGGAAGAACTGACGGCCCTTATTG AAAGCACCATAACCGCACTTGGTGCCGCTTCGCCCAAAGATATGGGTAGGGTCATATCTACCATCATGTCCAGTCATAAA GGCCAGGTAGACGGCAAAGCCCTTTCTGAGGCTGTAAAAAAACGCCTGCAATCCTGA
Upstream 100 bases:
>100_bases AGGCCGCCGCCCGGAAGCGGTTGATGAAAAAAATCAGGAAGATGAACATGGCCTAACCGGGGGCGCATGCATGCGCCCGG GGCCTTGCATCCGGCCAGTT
Downstream 100 bases:
>100_bases CCCGGTCCAACTGGCCCGCCTGCGCTGCAAAGCAGGCGGCAATGCACCATTTTCAGCCGCTTTTTCGCAATGGTGGATGT ACTGCGGCCTTCCAGATGCG
Product: GatB/YqeY domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MREAPFGGFPHFLLYSTLHHTTAMTVTTTLFEQIEKNYVQAYKARDSVRLTVLRLLKTAVKNRLVDLRRPGGSLSDEEML DVIVKEGKQRQDSIEQYTAAQRPDLAEKEAAELAVLKDYLPKALGQEELTALIESTITALGAASPKDMGRVISTIMSSHK GQVDGKALSEAVKKRLQS
Sequences:
>Translated_178_residues MREAPFGGFPHFLLYSTLHHTTAMTVTTTLFEQIEKNYVQAYKARDSVRLTVLRLLKTAVKNRLVDLRRPGGSLSDEEML DVIVKEGKQRQDSIEQYTAAQRPDLAEKEAAELAVLKDYLPKALGQEELTALIESTITALGAASPKDMGRVISTIMSSHK GQVDGKALSEAVKKRLQS >Mature_178_residues MREAPFGGFPHFLLYSTLHHTTAMTVTTTLFEQIEKNYVQAYKARDSVRLTVLRLLKTAVKNRLVDLRRPGGSLSDEEML DVIVKEGKQRQDSIEQYTAAQRPDLAEKEAAELAVLKDYLPKALGQEELTALIESTITALGAASPKDMGRVISTIMSSHK GQVDGKALSEAVKKRLQS
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 19729; Mature: 19729
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAPFGGFPHFLLYSTLHHTTAMTVTTTLFEQIEKNYVQAYKARDSVRLTVLRLLKTAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNRLVDLRRPGGSLSDEEMLDVIVKEGKQRQDSIEQYTAAQRPDLAEKEAAELAVLKDYL HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PKALGQEELTALIESTITALGAASPKDMGRVISTIMSSHKGQVDGKALSEAVKKRLQS HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MREAPFGGFPHFLLYSTLHHTTAMTVTTTLFEQIEKNYVQAYKARDSVRLTVLRLLKTAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNRLVDLRRPGGSLSDEEMLDVIVKEGKQRQDSIEQYTAAQRPDLAEKEAAELAVLKDYL HHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PKALGQEELTALIESTITALGAASPKDMGRVISTIMSSHKGQVDGKALSEAVKKRLQS HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]