Click here to switch to the map view.

The map label for this gene is atoD.1 [H]

Identifier: 21910915

GI number: 21910915

Start: 1381815

End: 1382390

Strand: Direct

Name: atoD.1 [H]

Synonym: SpyM3_1379

Alternate gene names: 21910915

Gene position: 1381815-1382390 (Clockwise)

Preceding gene: 21910914

Following gene: 21910916

Centisome position: 72.71

GC content: 41.67

Gene sequence:

>576_bases
ATGACAAATGGCACACCAGAAAAATTAATTGATGCACTTGTGGAAAAAGGTGTCAAAGGCCTCACTTTAATCTGTAACGA
TGCCGGTTTTCCTGACAAAGGCGTTGGTAAGATGGTTGCCAATAAACAGTTTTCAACTATTATTGCTTCCCATATCGGTC
TCAACCGTGAAGCGGGCCGACAAATGACTGAGGGCGAGACTGTAATTGATCTTGTACCTCAGGGAACATTAGCTGAGCGC
ATCCGCAGTGGCGGTTTTGGGCTAGGCGGTTTTTTAACACCTACTGGAATAGGAACCGAAGTTGCCAAAGGAAAAGAAGT
TATTACTATTGATGGCAAAGAATACCTTCTTGAAACGCCTTTGAAAGCTGATGTCGCACTTATTTTTGCTAACAAGGCAG
ATAAAAATGGCAATTTGCAATACGCAGGTTCTGAAAATAACTTTAATCATGTGATGGCTGCTAATGCGAAAACCACCATT
GTTGAAGCAAGAGAAATTGTTGACGTGGGGCAAATGGATCCTAATTTTGTCCATACTCCTGGCATTTTTGTTAACTACTT
AGTGAAAGGAGCCTAA

Upstream 100 bases:

>100_bases
AGTCTCGTGAAAGTTGGTAGAAAAAATGTGTAAATAAATCACAATAAAAGAAGCGGTAGCTCACGTTAAAGACGATGATA
CCATTATGGTTGGTGGCTTC

Downstream 100 bases:

>100_bases
CATGGGAACATCAGCTACTGTTCTTTCAAAAGAAGAGATTCAAACACGTATTGCTAAGCGCGTTGCACAAGAATTAGAAC
ACAATACACTGGTCAACTTA

Product: putative Acetyl-CoA:acetoacetyl-CoA transferase A subunit

Products: NA

Alternate protein names: Acetyl-CoA:acetoacetate-CoA transferase subunit alpha [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTNGTPEKLIDALVEKGVKGLTLICNDAGFPDKGVGKMVANKQFSTIIASHIGLNREAGRQMTEGETVIDLVPQGTLAER
IRSGGFGLGGFLTPTGIGTEVAKGKEVITIDGKEYLLETPLKADVALIFANKADKNGNLQYAGSENNFNHVMAANAKTTI
VEAREIVDVGQMDPNFVHTPGIFVNYLVKGA

Sequences:

>Translated_191_residues
MTNGTPEKLIDALVEKGVKGLTLICNDAGFPDKGVGKMVANKQFSTIIASHIGLNREAGRQMTEGETVIDLVPQGTLAER
IRSGGFGLGGFLTPTGIGTEVAKGKEVITIDGKEYLLETPLKADVALIFANKADKNGNLQYAGSENNFNHVMAANAKTTI
VEAREIVDVGQMDPNFVHTPGIFVNYLVKGA
>Mature_190_residues
TNGTPEKLIDALVEKGVKGLTLICNDAGFPDKGVGKMVANKQFSTIIASHIGLNREAGRQMTEGETVIDLVPQGTLAERI
RSGGFGLGGFLTPTGIGTEVAKGKEVITIDGKEYLLETPLKADVALIFANKADKNGNLQYAGSENNFNHVMAANAKTTIV
EAREIVDVGQMDPNFVHTPGIFVNYLVKGA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=205, Percent_Identity=43.4146341463415, Blast_Score=167, Evalue=7e-42,
Organism=Homo sapiens, GI11545841, Length=205, Percent_Identity=40, Blast_Score=132, Evalue=1e-31,
Organism=Escherichia coli, GI1788551, Length=188, Percent_Identity=51.5957446808511, Blast_Score=204, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17531517, Length=207, Percent_Identity=40.0966183574879, Blast_Score=152, Evalue=8e-38,
Organism=Drosophila melanogaster, GI21358325, Length=205, Percent_Identity=42.4390243902439, Blast_Score=163, Evalue=8e-41,
Organism=Drosophila melanogaster, GI24655794, Length=205, Percent_Identity=42.4390243902439, Blast_Score=162, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.8 [H]

Molecular weight: Translated: 20259; Mature: 20128

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGTPEKLIDALVEKGVKGLTLICNDAGFPDKGVGKMVANKQFSTIIASHIGLNREAGR
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHCC
QMTEGETVIDLVPQGTLAERIRSGGFGLGGFLTPTGIGTEVAKGKEVITIDGKEYLLETP
CCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCEEECCC
LKADVALIFANKADKNGNLQYAGSENNFNHVMAANAKTTIVEAREIVDVGQMDPNFVHTP
CCCCEEEEEECCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECC
GIFVNYLVKGA
CCEEHEEECCC
>Mature Secondary Structure 
TNGTPEKLIDALVEKGVKGLTLICNDAGFPDKGVGKMVANKQFSTIIASHIGLNREAGR
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHCC
QMTEGETVIDLVPQGTLAERIRSGGFGLGGFLTPTGIGTEVAKGKEVITIDGKEYLLETP
CCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCEEECCC
LKADVALIFANKADKNGNLQYAGSENNFNHVMAANAKTTIVEAREIVDVGQMDPNFVHTP
CCCCEEEEEECCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECC
GIFVNYLVKGA
CCEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]