Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is yvoA [H]
Identifier: 21910379
GI number: 21910379
Start: 896911
End: 897609
Strand: Reverse
Name: yvoA [H]
Synonym: SpyM3_0843
Alternate gene names: 21910379
Gene position: 897609-896911 (Counterclockwise)
Preceding gene: 21910380
Following gene: 21910378
Centisome position: 47.23
GC content: 38.91
Gene sequence:
>699_bases ATGTTACCAGCTTATATAAAAATTCATGATGCAATTAAAAAAGACATTGATCTGGGCATCTGGCCAATTGGTAGTCGCTT ACCAAGTGAACGACATTTAGCGGAACATTTCACCGTTAGTCGAATGACTCTACGGCAGGCTATTACATTACTAGTAGAAG AAGGGATTCTTGAAAGGCGGATAGGAAGTGGTACTTATGTTGCCAGTCATCGTGTTCAAGAAAAAATGCGAGGAACAACA AGTTTCACAGAAATTATACGCTCCCAAGGACGACAACCCTCCTCTAAATTATTATCCTATCAAAAGCAATTAGCTAGTGA TACCGAAGTTAAAGAATTGAACTTAGACAAAACAGACTTGGTCATTCGAATGGAACGTATCCGCTATGCAGACAGTGTCC CTTTGGTGTACGAAATTGCTTCAATCCCAGAAAAATTTATAAAAACGGTTAAACGAGCTGATATTACAGAACACTTTTTT CACTCATTGATAGCAAATGGTTACGAGATTGGTAAAAGTAAACAGACAATCTACGCTAAGCTAGCAAGTGAGCGTGTAGC CTCCTACTTGGAAGTTGCTAAAGGACATGCCATTTTGGCTCTAACTCAGGTGTCTTACTTTACAGACGGCAAACCTTTTG AGTATGTCCGCAGTCAGTATATCGGTGACCGTTTTGAATTTTACTTAGAAAATAATTAG
Upstream 100 bases:
>100_bases GGTAATATCATTAATTGATGCCAAATACCTCAATATTTACAATTCAATTTTCATCAAAAATATGATAAAATAGATGAATA ACCGACTTGAGGAGTGTGGC
Downstream 100 bases:
>100_bases TAAAGAAGTCATTTATGACTTCCTTTTTTACACGAACAGCATAAGGCAATTAATTTGCTACTGTTAAAAACAATCATAGT ATGATAAAATGAACATTATG
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSRMTLRQAITLLVEEGILERRIGSGTYVASHRVQEKMRGTT SFTEIIRSQGRQPSSKLLSYQKQLASDTEVKELNLDKTDLVIRMERIRYADSVPLVYEIASIPEKFIKTVKRADITEHFF HSLIANGYEIGKSKQTIYAKLASERVASYLEVAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN
Sequences:
>Translated_232_residues MLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSRMTLRQAITLLVEEGILERRIGSGTYVASHRVQEKMRGTT SFTEIIRSQGRQPSSKLLSYQKQLASDTEVKELNLDKTDLVIRMERIRYADSVPLVYEIASIPEKFIKTVKRADITEHFF HSLIANGYEIGKSKQTIYAKLASERVASYLEVAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN >Mature_232_residues MLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSRMTLRQAITLLVEEGILERRIGSGTYVASHRVQEKMRGTT SFTEIIRSQGRQPSSKLLSYQKQLASDTEVKELNLDKTDLVIRMERIRYADSVPLVYEIASIPEKFIKTVKRADITEHFF HSLIANGYEIGKSKQTIYAKLASERVASYLEVAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN
Specific function: Acts as a weak repressor of yflG expression [H]
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786950, Length=228, Percent_Identity=30.7017543859649, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1790118, Length=212, Percent_Identity=28.3018867924528, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87082252, Length=212, Percent_Identity=25.9433962264151, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788418, Length=228, Percent_Identity=23.2456140350877, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790540, Length=217, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000524 - InterPro: IPR011663 - InterPro: IPR011991 [H]
Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]
EC number: NA
Molecular weight: Translated: 26618; Mature: 26618
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSRMTLRQAITLLVEEGILERR CCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGSGTYVASHRVQEKMRGTTSFTEIIRSQGRQPSSKLLSYQKQLASDTEVKELNLDKTDL CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHH VIRMERIRYADSVPLVYEIASIPEKFIKTVKRADITEHFFHSLIANGYEIGKSKQTIYAK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCHHHHHHH LASERVASYLEVAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN HHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure MLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSRMTLRQAITLLVEEGILERR CCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGSGTYVASHRVQEKMRGTTSFTEIIRSQGRQPSSKLLSYQKQLASDTEVKELNLDKTDL CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHHH VIRMERIRYADSVPLVYEIASIPEKFIKTVKRADITEHFFHSLIANGYEIGKSKQTIYAK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCHHHHHHH LASERVASYLEVAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN HHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]