Click here to switch to the map view.

The map label for this gene is citE [H]

Identifier: 21910369

GI number: 21910369

Start: 885694

End: 886581

Strand: Direct

Name: citE [H]

Synonym: SpyM3_0833

Alternate gene names: 21910369

Gene position: 885694-886581 (Clockwise)

Preceding gene: 21910368

Following gene: 21910370

Centisome position: 46.6

GC content: 42.45

Gene sequence:

>888_bases
ATGGAACGTTTAAGAAGAACAATGATGTTTGTGCCAGGTGCCAATGCTGCTATGCTTCGAGATGCTCCTTTGTTTGGTGC
TGATTCAATCATGTTTGACTTGGAAGATTCTGTTTCACTCAAAGAAAAAGACACTTCTAGAGCTCTCGTCCATTTTGCGC
TAAAAACTTTTGATTATTCGAGCGTTGAAACGGTTGTTCGTGTGAATGGTCTTGATTCTTGTGGGGCTTTAGACATCGAA
GCTGTTGTTTTGGCAGGTGTCAACGTGATTCGTCTTCCAAAAACAGAGACTGCACAAGATATCGTTGATGTGGAGGCTGT
TATTGAACGTGTCGAACGTGAGAACAGCATTGAAGTTGGTCGCACACGTATGATGGCAGCCATTGAATCAGCCGAAGGTG
TTCTAAATGCTCGTGAGATTGCCAAAGCTTCTAAGCGCTTGATTGGTATTGCTCTTGGGGCAGAAGACTATGTCACGAAT
ATGAAAACGCGTCGTTACCCAGATGGTCAAGAATTATTCTTTGCTCGTAGCATGATTTTACATGCTGCTCGTGCTGCTGG
AATTGCTGCCATTGATACTGTTTATTCTGATGTCAATAATACAGAAGGATTCCAAAACGAAGTTCGTATGATCAAACAGT
TAGGATTTGACGGTAAATCGGTCATCAACCCTCGCCAAATTCCTCTGGTCAATGAGATTTATACCCCAACCGAAAAAGAA
ATTGACCATTCCAAACAAGTCATCTGGGCAATTCGTGAAGCTGAAAGCAAAGGCTCTGGCGTTATTTCCTTAAATGGAAA
AATGGTTGATAAACCAATCGTTGAACGTGCAGAACGTGTCATTGCCCTAGCAACAGCAGCAGGTGTTTTATCTGAGGAGG
ACATTTAA

Upstream 100 bases:

>100_bases
TTGATAAAGGCGCTTTAGATTGCACCATTCAAGCGAGAACCATCGCAGCTGTTCATCGCGCAGCTGGTGTTGACCAATAC
GATTGGAAGGAGATTGACTC

Downstream 100 bases:

>100_bases
AGATGGTAACAAATAAACTCGGTAGAGATATTCCTCAACCATACGCCGACCAATACGGTGTCTTTGAAGGAGAACTCGCA
AATATCAAACAGTATGACGA

Product: putative citrate lyase beta subunit

Products: NA

Alternate protein names: Citrase beta chain; Citrate (pro-3S)-lyase subunit beta; Citryl-CoA lyase subunit [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MERLRRTMMFVPGANAAMLRDAPLFGADSIMFDLEDSVSLKEKDTSRALVHFALKTFDYSSVETVVRVNGLDSCGALDIE
AVVLAGVNVIRLPKTETAQDIVDVEAVIERVERENSIEVGRTRMMAAIESAEGVLNAREIAKASKRLIGIALGAEDYVTN
MKTRRYPDGQELFFARSMILHAARAAGIAAIDTVYSDVNNTEGFQNEVRMIKQLGFDGKSVINPRQIPLVNEIYTPTEKE
IDHSKQVIWAIREAESKGSGVISLNGKMVDKPIVERAERVIALATAAGVLSEEDI

Sequences:

>Translated_295_residues
MERLRRTMMFVPGANAAMLRDAPLFGADSIMFDLEDSVSLKEKDTSRALVHFALKTFDYSSVETVVRVNGLDSCGALDIE
AVVLAGVNVIRLPKTETAQDIVDVEAVIERVERENSIEVGRTRMMAAIESAEGVLNAREIAKASKRLIGIALGAEDYVTN
MKTRRYPDGQELFFARSMILHAARAAGIAAIDTVYSDVNNTEGFQNEVRMIKQLGFDGKSVINPRQIPLVNEIYTPTEKE
IDHSKQVIWAIREAESKGSGVISLNGKMVDKPIVERAERVIALATAAGVLSEEDI
>Mature_295_residues
MERLRRTMMFVPGANAAMLRDAPLFGADSIMFDLEDSVSLKEKDTSRALVHFALKTFDYSSVETVVRVNGLDSCGALDIE
AVVLAGVNVIRLPKTETAQDIVDVEAVIERVERENSIEVGRTRMMAAIESAEGVLNAREIAKASKRLIGIALGAEDYVTN
MKTRRYPDGQELFFARSMILHAARAAGIAAIDTVYSDVNNTEGFQNEVRMIKQLGFDGKSVINPRQIPLVNEIYTPTEKE
IDHSKQVIWAIREAESKGSGVISLNGKMVDKPIVERAERVIALATAAGVLSEEDI

Specific function: Represents a citryl-ACP lyase [H]

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily [H]

Homologues:

Organism=Homo sapiens, GI45545437, Length=293, Percent_Identity=27.3037542662116, Blast_Score=128, Evalue=5e-30,
Organism=Escherichia coli, GI87081764, Length=291, Percent_Identity=57.3883161512027, Blast_Score=327, Evalue=6e-91,
Organism=Caenorhabditis elegans, GI17557458, Length=295, Percent_Identity=28.135593220339, Blast_Score=137, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR011206
- InterPro:   IPR006475
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: =4.1.3.6; =4.1.3.34 [H]

Molecular weight: Translated: 32400; Mature: 32400

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLRRTMMFVPGANAAMLRDAPLFGADSIMFDLEDSVSLKEKDTSRALVHFALKTFDYS
CHHHHHHEEECCCCCCHHEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
SVETVVRVNGLDSCGALDIEAVVLAGVNVIRLPKTETAQDIVDVEAVIERVERENSIEVG
HHHHEEEECCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHH
RTRMMAAIESAEGVLNAREIAKASKRLIGIALGAEDYVTNMKTRRYPDGQELFFARSMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHCCCCCHHHHHHHHHHHH
HAARAAGIAAIDTVYSDVNNTEGFQNEVRMIKQLGFDGKSVINPRQIPLVNEIYTPTEKE
HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHH
IDHSKQVIWAIREAESKGSGVISLNGKMVDKPIVERAERVIALATAAGVLSEEDI
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MERLRRTMMFVPGANAAMLRDAPLFGADSIMFDLEDSVSLKEKDTSRALVHFALKTFDYS
CHHHHHHEEECCCCCCHHEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
SVETVVRVNGLDSCGALDIEAVVLAGVNVIRLPKTETAQDIVDVEAVIERVERENSIEVG
HHHHEEEECCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHH
RTRMMAAIESAEGVLNAREIAKASKRLIGIALGAEDYVTNMKTRRYPDGQELFFARSMIL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHCCCCCHHHHHHHHHHHH
HAARAAGIAAIDTVYSDVNNTEGFQNEVRMIKQLGFDGKSVINPRQIPLVNEIYTPTEKE
HHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHH
IDHSKQVIWAIREAESKGSGVISLNGKMVDKPIVERAERVIALATAAGVLSEEDI
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9457870 [H]