Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is smf [H]
Identifier: 21910355
GI number: 21910355
Start: 871597
End: 872433
Strand: Direct
Name: smf [H]
Synonym: SpyM3_0819
Alternate gene names: 21910355
Gene position: 871597-872433 (Clockwise)
Preceding gene: 21910354
Following gene: 21910356
Centisome position: 45.86
GC content: 39.31
Gene sequence:
>837_bases GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAAAAACATTCTCAATATTCTTGACTACCAAAA ACACCAGGAAAAATCGTTGTCACTTCGAGATATGGCCGTTGTTTCTGGTTGTAAGCATCCGTCTCACTTTATAGAAGCCT ATAAGCAGTTAGATATTCAAAAATTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCTTAGATAAGCATTACCCA ATGGCATTGAAAGAAATATACAATCCACCTGTCCTCTTGTTTTTTCAGGGAAATTTAGACCTTCTTGAGAAACCTAAATT AGCCATTGTCGGCTCCAGACGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT TTGTGATTGTTAGCGGACTTGCTCGAGGTATCGACACTAGTGCTCATTTAGCCTGCCTTAAAAATGGGGGACAAACCATC GCTATTATTGGAACAGGGTTGGATCGCTTTTACCCTAAAGAAAATAGGGAGTTGCAAACTTTCTTAGGGAAAAATCATCT TGTGCTAACAGAATACGGTCCAAGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCCTTCAGTTAATTAAAGAGGGAGCAACATG CGTCACATCGGGCATGGATATCCTTTCAGAGTACTAA
Upstream 100 bases:
>100_bases GTTAAATCCATGTGCTGCGATTCAACTAATCCTTAAAAAGTTCTGTTTTTAGCAGAATTTTTTTCTTTTTTACGAATAAA TGAAGTAAGGAGGTAACTTA
Downstream 100 bases:
>100_bases AAAAGTTAAAGTTTCTTCCTATATAGCATTTTTTATTGACAGTTTCTTAAAAATGGGATATTATGCTATAAGCTTTAAAC AAACTGTTATAGGAAGTGTG
Product: Smf family DNA processing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYP MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI AIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY
Sequences:
>Translated_278_residues MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYP MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI AIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY >Mature_278_residues MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYP MALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI AIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY
Specific function: Unknown
COG id: COG0758
COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smf family [H]
Homologues:
Organism=Escherichia coli, GI48994932, Length=199, Percent_Identity=44.2211055276382, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003488 [H]
Pfam domain/function: PF02481 DNA_processg_A [H]
EC number: NA
Molecular weight: Translated: 31088; Mature: 31088
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQ CCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH KLKMEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGV HHHHHHHHCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH KSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTIAIIGTGLDRFYPKENRELQT HHHHHHHHHHCCCEEEEECHHHCCCCHHHHHEEECCCCEEEEEECCHHHCCCCCCCHHHH FLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR HHCCCCEEEECCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCC DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCHHHHHCC >Mature Secondary Structure MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQ CCCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH KLKMEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGV HHHHHHHHCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH KSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTIAIIGTGLDRFYPKENRELQT HHHHHHHHHHCCCEEEEECHHHCCCCHHHHHEEECCCCEEEEEECCHHHCCCCCCCHHHH FLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR HHCCCCEEEECCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCC DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY EEEEECCCCCCCCCHHHHHHHHCCCHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]