Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is rbgA [H]
Identifier: 21910353
GI number: 21910353
Start: 869903
End: 870751
Strand: Direct
Name: rbgA [H]
Synonym: SpyM3_0817
Alternate gene names: 21910353
Gene position: 869903-870751 (Clockwise)
Preceding gene: 21910349
Following gene: 21910354
Centisome position: 45.77
GC content: 38.4
Gene sequence:
>849_bases ATGGCAATGATTCAATGGTTTCCTGGGCACATGTCCAAAGCCAGAAGACAGGTTCAGGAAAATGTAAAGCATGTTGACTT TGTAACTATTTTAGTGGATGCACGCTTGCCACTTTCTAGTCAAAATCCCATGCTCACCAAAATTGTTGGTGATAAACCTA AATTAATGATTTTAAATAAAGCTGACTTGGCAGATGCAACTCGAACTAAAGAGTGGAAAGCCTACTATGAAAGTCAAGGC ATTAAAACACTAGCCATCAATTCTAAAGAACAATCAACAGTTAAAAAAGTAACAGAAGCAGCCAAGGAACTCATAGCTGA TAAAATTAAGCGCCTGCGTGATCGTGGTATTCAAAAAGAAACCTTACGAACCATGATTATTGGCATTCCGAATGCTGGTA AATCTACCTTGATGAATCGCTTGGCTGGTAAGAAAATTGCTGTGGTTGGTAATAAACCTGGTGTGACCAAAGGGCAACAA TGGTTGAAGTCCAATAAGGAATTGGAAATTCTAGATACCCCTGGTATTTTATGGCCAAAATTTGAGGACGAATTGGTTGG CTTAAAATTAGCTTTAACAGGTGCTATCAAGGACCAATTACTACCAATGGATGAGGTCACTATTTTTGGTTTGAATTACT TTAAAACACATTATCCTAGTCGCCTTACTAAGCGTTTTAAGAATATTCCTCTTGAGGAAGAAGCTCCTGAAATCATTATG ACCTTAACACGTCAGCTTGGCTTTAAAGATGATTACGACCGTTTCTACAGTTTATTCGTTAAGGAAGTTCGTGATGGTAA ATTAGGTCAATACACCTTAGATCAGGTGGGAGATATGGATGCCGACTAG
Upstream 100 bases:
>100_bases ATGCTATAATGTTAAAGAATTGATTGGGATAGATGCCTTCTGTCGCAATCAGACTATTTTATCACGAAGAAGATGATGCT ACGAAAGGAATGATACACTC
Downstream 100 bases:
>100_bases TATTAAAGCTATTAAAGAAAGCTTAGAGGCCGTTACTAGCCTCTTGGACCCCCTCTTTCAAGAATTGGCAACCGACACTA GGTCAGGCGTCCAAAAAGCG
Product: ribosomal biogenesis GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAMIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADLADATRTKEWKAYYESQG IKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQ WLKSNKELEILDTPGILWPKFEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIM TLTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD
Sequences:
>Translated_282_residues MAMIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADLADATRTKEWKAYYESQG IKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQ WLKSNKELEILDTPGILWPKFEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIM TLTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD >Mature_281_residues AMIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADLADATRTKEWKAYYESQGI KTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQW LKSNKELEILDTPGILWPKFEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMT LTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI93277113, Length=220, Percent_Identity=35.4545454545455, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI296317324, Length=240, Percent_Identity=25, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI9506611, Length=240, Percent_Identity=25, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211047, Length=222, Percent_Identity=25.2252252252252, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17534827, Length=203, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25143545, Length=285, Percent_Identity=25.6140350877193, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115535155, Length=285, Percent_Identity=25.6140350877193, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71982363, Length=187, Percent_Identity=28.3422459893048, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323744, Length=221, Percent_Identity=27.6018099547511, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6321339, Length=208, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI85815858, Length=230, Percent_Identity=32.6086956521739, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI28572990, Length=241, Percent_Identity=29.045643153527, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023179 - InterPro: IPR019991 - InterPro: IPR016478 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 32051; Mature: 31920
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNK CCEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEC ADLADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKE CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPK HHHHHEEECCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCC FEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIM CCHHHHHHHEEEHHHHHHHCCCCCCEEEEEHHHHHHHCHHHHHHHHHCCCCCCCHHHHHH TLTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure AMIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNK CEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEC ADLADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKE CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPK HHHHHEEECCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCC FEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIM CCHHHHHHHEEEHHHHHHHCCCCCCEEEEEHHHHHHHCHHHHHHHHHCCCCCCCHHHHHH TLTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]