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The map label for this gene is tdk [H]

Identifier: 21910334

GI number: 21910334

Start: 850011

End: 850550

Strand: Direct

Name: tdk [H]

Synonym: SpyM3_0798

Alternate gene names: 21910334

Gene position: 850011-850550 (Clockwise)

Preceding gene: 21910331

Following gene: 21910335

Centisome position: 44.73

GC content: 35.19

Gene sequence:

>540_bases
ATGAATTCTGGTAAAACCATTGAAATTTTAAAAGTTGCTCATAACTATGAAGAACAAGGCAAACCTGTTGTCATTATGAC
AAGTGCTCTTGATACACGTGATGGTTTTGGCATCGTCTCAAGCCGTATTGGTATGCGACGAGAAGCTATTCCCATTTCAA
ATGACATGGATATTTTCACATTTATTGCCCAATTGGAGGAAAAACCTTATTGTGTCCTGATTGACGAAAGCCAATTTTTA
AGCAAGCAAAATGTTTATGATTTGGCGCGTGTGGTGGATGAGCTAAATGTTCCTGTCATGGCTTTTGGTTTGAAAAATGA
TTTCCAAAACAATCTTTTTGAAGGTTCAAAACATTTGCTATTATTGGCCGATAAGATTGATGAAATCAAAACAATTTGCC
AATACTGTAGTAAGAAAGCAACCATGGTTTTAAGGATAGAAAACGGAAAACCTGTCTATGAAGGTGATCAGATACAAATT
GGTGGTAATGAAACCTATATCCCAGTTTGTCGAAAACATTATTTTAATCCAGAGATTTAA

Upstream 100 bases:

>100_bases
CAATGGCTGGGAAAACTTCAGCCTTTGTGGTAAAATAGGTAGAATACTATAGAAAGTAGGATTTTCCGCTTTGGCTCAAC
TCTATTATAAATATGGGACA

Downstream 100 bases:

>100_bases
AAGGTAATCAGTTTTAAAGGAGATACAAAGAAAAATGAATATTTATGATCAATTGCAGGCAGTTGAAGATCGTTATGAAG
AGTTAGGTGAGTTACTTAGT

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIPISNDMDIFTFIAQLEEKPYCVLIDESQFL
SKQNVYDLARVVDELNVPVMAFGLKNDFQNNLFEGSKHLLLLADKIDEIKTICQYCSKKATMVLRIENGKPVYEGDQIQI
GGNETYIPVCRKHYFNPEI

Sequences:

>Translated_179_residues
MNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIPISNDMDIFTFIAQLEEKPYCVLIDESQFL
SKQNVYDLARVVDELNVPVMAFGLKNDFQNNLFEGSKHLLLLADKIDEIKTICQYCSKKATMVLRIENGKPVYEGDQIQI
GGNETYIPVCRKHYFNPEI
>Mature_179_residues
MNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIPISNDMDIFTFIAQLEEKPYCVLIDESQFL
SKQNVYDLARVVDELNVPVMAFGLKNDFQNNLFEGSKHLLLLADKIDEIKTICQYCSKKATMVLRIENGKPVYEGDQIQI
GGNETYIPVCRKHYFNPEI

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=177, Percent_Identity=48.0225988700565, Blast_Score=177, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020633
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 20340; Mature: 20340

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00603 TK_CELLULAR_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIPISNDMDIFT
CCCCCEEEEEEEECCHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
FIAQLEEKPYCVLIDESQFLSKQNVYDLARVVDELNVPVMAFGLKNDFQNNLFEGSKHLL
HHHHHCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEE
LLADKIDEIKTICQYCSKKATMVLRIENGKPVYEGDQIQIGGNETYIPVCRKHYFNPEI
EEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEHHHHHCCCCCCC
>Mature Secondary Structure
MNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGFGIVSSRIGMRREAIPISNDMDIFT
CCCCCEEEEEEEECCHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
FIAQLEEKPYCVLIDESQFLSKQNVYDLARVVDELNVPVMAFGLKNDFQNNLFEGSKHLL
HHHHHCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEE
LLADKIDEIKTICQYCSKKATMVLRIENGKPVYEGDQIQIGGNETYIPVCRKHYFNPEI
EEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCEEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA