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The map label for this gene is cobQ [H]

Identifier: 21910203

GI number: 21910203

Start: 733183

End: 733974

Strand: Reverse

Name: cobQ [H]

Synonym: SpyM3_0667

Alternate gene names: 21910203

Gene position: 733974-733183 (Counterclockwise)

Preceding gene: 21910204

Following gene: 21910201

Centisome position: 38.62

GC content: 36.62

Gene sequence:

>792_bases
ATGACATACACTTCACTAAAATCTCCCGAAAATCAAGACTACATCTACGACCTCAATATCGCCCATCTCTATGGTAATCT
TATGAATACTTATGGTGATAACGGCAATATTTTAATGCTCAAGTATGTCGCTGAAAAACTTGGAGCTAGGGTTACTGTTG
ATATTGTGTCTATCAATGATACCTTTGAACAAGACGATTACGATATTGTTTTCTTTGGTGGTGGTCAAGATTATGAACAA
AGCATTGTTGCCAAGGATTTGCCTAGCAAAAAAGCTGCCTTAGCGGATTACATTGCTAATAATAAAGTGGTGCTTGCCAT
CTGTGGTGGCTTCCAATTACTAGGGCAATACTATGTCCAAGCTAATGGGGTTAAAATTGATGGACTTGGAATTATGGGAC
ACTACACCCTTAATCAGCACCAAAATCGCTTTATTGGAGATATTAAAATTCATAATGACGAATTTAACGAAACCTATTAT
GGCTTTGAAAATCATCAAGGACGTACCTTCTTATCTGGTGACGAAAAGCCACTTGGACAAGTGGTTTATGGCAACGGTAA
TAATAAAGAAGACCAAACTGAAGGTGTTCACTATAAAAACGTCTATGGTAGTTATTTCCACGGTCCTATCTTATCACGCA
ATGTTAATCTTGCTTACCGCTTAGTAACAACAGCTCTTAAAAAAAAGTATGGATCAGCTATTTCACTACCTAGCTATGAT
GATATACTGAAACAAGAAATCACTGAAGAATATGCCGACCTTAAAAGCAAAGCTTCCTTTAATAAAGTTTAA

Upstream 100 bases:

>100_bases
AAGAAGCTAAGCATGCCTATATTTTAGCAACCTATACAGCAATGTTAGAATTCCGTAGCTTACTTGCTGACCGCCATGTC
GTTGAAAAGGAGATGATCTA

Downstream 100 bases:

>100_bases
GTTCTTCTTTCATGTCATCAAACAAAAACTCCTAAGTAGGACACGATAGTTCGCTTAGGAGTTTTATAGTTTTTTCTTCT
GACAGAGCTTCTTAAGTGAT

Product: putative cobyric acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTYTSLKSPENQDYIYDLNIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQ
SIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYY
GFENHQGRTFLSGDEKPLGQVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD
DILKQEITEEYADLKSKASFNKV

Sequences:

>Translated_263_residues
MTYTSLKSPENQDYIYDLNIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQ
SIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYY
GFENHQGRTFLSGDEKPLGQVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD
DILKQEITEEYADLKSKASFNKV
>Mature_262_residues
TYTSLKSPENQDYIYDLNIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQS
IVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYG
FENHQGRTFLSGDEKPLGQVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYDD
ILKQEITEEYADLKSKASFNKV

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 29573; Mature: 29442

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTSLKSPENQDYIYDLNIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSIND
CCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCEEEEEEEEECC
TFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQ
CCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHEE
ANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGQ
ECCEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEECCCCCCCCE
VVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD
EEECCCCCCCCHHCCCEEECCCCCHHCCCEEECCCCHHHHHHHHHHHHHHCCEECCCCHH
DILKQEITEEYADLKSKASFNKV
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TYTSLKSPENQDYIYDLNIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSIND
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCEEEEEEEEECC
TFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQ
CCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHEE
ANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGQ
ECCEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEECCCCCCCCE
VVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD
EEECCCCCCCCHHCCCEEECCCCCHHCCCEEECCCCHHHHHHHHHHHHHHCCEECCCCHH
DILKQEITEEYADLKSKASFNKV
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]