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The map label for this gene is ydiF [H]

Identifier: 21910196

GI number: 21910196

Start: 721041

End: 722948

Strand: Direct

Name: ydiF [H]

Synonym: SpyM3_0660

Alternate gene names: 21910196

Gene position: 721041-722948 (Clockwise)

Preceding gene: 21910195

Following gene: 21910197

Centisome position: 37.94

GC content: 40.88

Gene sequence:

>1908_bases
ATGATTATTTTACAAGGAAACAAGTTAGAACGCTCTTTCTCAGGAGATGTTCTTTTTCAAAACATATCACTGCAAGTTGA
TGAAAGAGACAGAATTGCATTAGTGGGGCCAAATGGAGCTGGTAAGTCAACCTTACTCAAGCTATTGGTTGGGGAAGAAA
CCCCAACGAGCGGAGAAGTTAATACTAAAAAAGACCTAACCTTGTCTTATCTGGCTCAAAATAGCCGTTTTGAATCTGAC
AAAACGATATATGAGGAAATGCTCAAGGTTTTCGAAGCATTACGCCAAGATGAAAAGCGTCTCCGTCAGATGGAAATGGA
TATGGCAACCGTTTCAGGTCAGGACTTGACACGGCTGATGATGGATTATGATCTTTTAGCAGAACGTTTTCGTCAGCAAG
GTGGCTTTACATATGAAGCTGAGATTAAAGCCATTTTAAATGGCTTTAAATTTGATGAAAGCATGTGGCAGATGACTATC
GCTGAGCTGTCAGGGGGTCAAAACACTCGTCTGGCCTTGGCTAAAATGCTTTTAGAAAAGCCAGAACTATTGGTCCTTGA
TGAGCCAACAAACCACTTAGATATTGAAACCATTGCCTGGTTAGAGAACTACTTGGCCAATTATCAAGGAGCTCTAATCA
TTGTGAGTCACGACCGTTATTTTTTGGATAAGGTGGCAACAGTGACCTTGGATTTAACTCCTCATGGATTGGATCGCTAC
GTTGGCAATTATTCTCGTTTTATGACCTTAAAAGCTGAAAAATTAGTAGCCGAAGAAAAGCAGTTTGACAAACAGCAAAA
AGAAATTGCCAAGTTAGAAGATTTTGTTCAAAAAAATATTGTCAGGGCTTCAACTACAAAACGTGCTCAGGCGAGACGTA
AGCAATTGGAAAAAATAGAACGCTTAGACAAACCGACTAGTGCTAGAAAATCAGCTCACATGACTTTTCAGGCAGATAAG
CCGTCTGGCAATGTGGTGTTGACGGTTGAAAAAGCTGCTATTGGTTATAACCAACATGTTTTATCTGAGCCTATTAACCT
AGACGTTCACAAATTAGATGCGATTGCTATTGTTGGTCCAAATGGTATTGGTAAATCCACTCTGATTAAATCTGTTATTG
GACAGATTCCTTTCATCAAAGGAGAAGTGAAATACGGTGCCAATGTTGAAATAGGTTACTATGACCAAACCCAATCACAT
TTGACGTCTAGCAACACAGTTTTGGAAGAATTATGGCAGGATTTTTCAACCACGCCAGAAGTCGATATCAGAAACCGATT
AGGGGCTTTTCTCTTTTCTGGAGATGATGTCAAAAAATCGGTGGCCATGCTGTCAGGTGGAGAAAAAGCCCGTCTGCTTC
TTGCGAAGTTATCTATGGAAAACAATAATTTTCTTGTTCTGGATGAGCCGACTAACCACCTAGACATTGACAGTAAAGAA
GTGCTAGAGAATGCCCTCATTGACTTTGACGGTACCTTGCTTTTTGTCAGCCACGACCGCTATTTCATTAATCGTTTGGC
AACTAAGGTTTTGGAAATTACCGAAAATGGCTCAACCCTTTACTTAGGTGACTATGATTATTACCTTGAGAAAAAGGCAG
AGCTAGAAGAACTAGCCCGCCTAGCAGCAGGAGAGACAGTTGAGGAAACAAAAGAAGCCTCTGCCACTGATTATCAGCTA
CAAAAAGCTAATCAAAAAGAGCGTCGTCGCTTGACCCGCCGATATGAGGAGATTGAAGCAAGACTTGAAACCATTGAAGA
GCGTATTGGTGCTATTCAAGAAGACATGCATGCCTCCAATGATACGGCGCAGTTAATCGCTTGGCAAAAGGAATGGGACC
AATTGGATCAAGAACAAGAAGCTCTTATGGAAGAATGGGAAACCATCGCTGAACAAATAGAATCATAA

Upstream 100 bases:

>100_bases
CGCTAAAGAAGGTAATCAACGACTTAAAAAGAGTTCGATTTCTTTTGGAAACTAGGCTGAAAATGTCCTCAAAAGGGCAT
TTTTTTGTTAGAATGAAAGT

Downstream 100 bases:

>100_bases
AAATAAGCTTTAGCAGTTTTGCTAAGCTTATTTTTATCGCTTTGCTACTTGTTTGAAGGTTTGAAAGAGGTTTTAAAATG
ATGTGTTTTTTATGTCAAGG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
KTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQDLTRLMMDYDLLAERFRQQGGFTYEAEIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPHGLDRY
VGNYSRFMTLKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTSARKSAHMTFQADK
PSGNVVLTVEKAAIGYNQHVLSEPINLDVHKLDAIAIVGPNGIGKSTLIKSVIGQIPFIKGEVKYGANVEIGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES

Sequences:

>Translated_635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
KTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQDLTRLMMDYDLLAERFRQQGGFTYEAEIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPHGLDRY
VGNYSRFMTLKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTSARKSAHMTFQADK
PSGNVVLTVEKAAIGYNQHVLSEPINLDVHKLDAIAIVGPNGIGKSTLIKSVIGQIPFIKGEVKYGANVEIGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
>Mature_635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
KTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQDLTRLMMDYDLLAERFRQQGGFTYEAEIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPHGLDRY
VGNYSRFMTLKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTSARKSAHMTFQADK
PSGNVVLTVEKAAIGYNQHVLSEPINLDVHKLDAIAIVGPNGIGKSTLIKSVIGQIPFIKGEVKYGANVEIGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=32.5757575757576, Blast_Score=258, Evalue=2e-68,
Organism=Homo sapiens, GI10947135, Length=561, Percent_Identity=32.620320855615, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI69354671, Length=561, Percent_Identity=32.620320855615, Blast_Score=214, Evalue=3e-55,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=29.4990723562152, Blast_Score=209, Evalue=8e-54,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=29.4990723562152, Blast_Score=208, Evalue=1e-53,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=35.3703703703704, Blast_Score=305, Evalue=5e-84,
Organism=Escherichia coli, GI1789751, Length=604, Percent_Identity=29.9668874172185, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI2367384, Length=522, Percent_Identity=34.0996168582375, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1787182, Length=635, Percent_Identity=31.0236220472441, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=28.9617486338798, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1788897, Length=232, Percent_Identity=24.5689655172414, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=551, Percent_Identity=31.5789473684211, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17553372, Length=509, Percent_Identity=31.6306483300589, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=521, Percent_Identity=28.9827255278311, Blast_Score=219, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=546, Percent_Identity=31.8681318681319, Blast_Score=240, Evalue=5e-64,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=32.015065913371, Blast_Score=237, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6324314, Length=395, Percent_Identity=27.8481012658228, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=396, Percent_Identity=28.2828282828283, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=386, Percent_Identity=28.4974093264249, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24666836, Length=549, Percent_Identity=33.5154826958106, Blast_Score=269, Evalue=5e-72,
Organism=Drosophila melanogaster, GI24642252, Length=550, Percent_Identity=30.7272727272727, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI18859989, Length=550, Percent_Identity=30.7272727272727, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=31.021897810219, Blast_Score=234, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72311; Mature: 72311

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEV
CEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCC
NTKKDLTLSYLAQNSRFESDKTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQDLTRLM
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MDYDLLAERFRQQGGFTYEAEIKAILNGFKFDESMWQMTIAELSGGQNTRLALAKMLLEK
HHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPHGLDRY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCEEEEEEECCCCHHHHH
VGNYSRFMTLKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIE
HCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDKPTSARKSAHMTFQADKPSGNVVLTVEKAAIGYNQHVLSEPINLDVHKLDAIAIVGP
HCCCCCCHHHCCEEEEEECCCCCCEEEEEEHHHCCCCHHHHCCCCCCCEEEEEEEEEECC
NGIGKSTLIKSVIGQIPFIKGEVKYGANVEIGYYDQTQSHLTSSNTVLEELWQDFSTTPE
CCCCHHHHHHHHHHCCCEEECEECCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
VDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
CCHHHHHHHEEECCCHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEEECCCCCCCCCHHH
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELAR
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH
LAAGETVEETKEASATDYQLQKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASN
HHCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
CHHHHEEEHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEV
CEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCC
NTKKDLTLSYLAQNSRFESDKTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQDLTRLM
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MDYDLLAERFRQQGGFTYEAEIKAILNGFKFDESMWQMTIAELSGGQNTRLALAKMLLEK
HHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPHGLDRY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCEEEEEEECCCCHHHHH
VGNYSRFMTLKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIE
HCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDKPTSARKSAHMTFQADKPSGNVVLTVEKAAIGYNQHVLSEPINLDVHKLDAIAIVGP
HCCCCCCHHHCCEEEEEECCCCCCEEEEEEHHHCCCCHHHHCCCCCCCEEEEEEEEEECC
NGIGKSTLIKSVIGQIPFIKGEVKYGANVEIGYYDQTQSHLTSSNTVLEELWQDFSTTPE
CCCCHHHHHHHHHHCCCEEECEECCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
VDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
CCHHHHHHHEEECCCHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEEECCCCCCCCCHHH
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELAR
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH
LAAGETVEETKEASATDYQLQKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASN
HHCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
CHHHHEEEHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]